data_8T5B # _model_server_result.job_id LwWBb9ykpYAMALolv4mzkw _model_server_result.datetime_utc '2024-11-15 22:57:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t5b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 8T5B # _exptl.entry_id 8T5B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 480.986 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-tert-butoxy{4-(4-chlorophenyl)-2,6-dimethyl-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridin-5-yl}acetic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.73 _cell.angle_gamma 90 _cell.entry_id 8T5B _cell.length_a 61.954 _cell.length_b 69.984 _cell.length_c 63.858 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T5B _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 8 A ASP 64 1_555 F MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc2 A OD2 ASP 60 A ASP 116 1_555 F MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc3 B OD1 ASP 8 B ASP 64 1_555 H MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc4 B OD2 ASP 60 B ASP 116 1_555 H MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? # _chem_comp.formula 'C26 H29 Cl N4 O3' _chem_comp.formula_weight 480.986 _chem_comp.id QD6 _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-tert-butoxy{4-(4-chlorophenyl)-2,6-dimethyl-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridin-5-yl}acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C08 C06 QD6 sing 277 n n C09 C06 QD6 sing 278 n n C06 C07 QD6 sing 279 n n C06 O05 QD6 sing 280 n n C20 N19 QD6 sing 281 n n C20 C21 QD6 sing 282 n n C18 C17 QD6 sing 283 n n N19 C17 QD6 sing 284 n y N19 C14 QD6 sing 285 n y C17 C16 QD6 doub 286 n y C14 N13 QD6 doub 287 n y C14 C15 QD6 sing 288 n y N13 C11 QD6 sing 289 n y C29 C30 QD6 doub 290 n y C29 C28 QD6 sing 291 n y O05 C04 QD6 sing 292 n n C16 C15 QD6 sing 293 n y C15 C27 QD6 doub 294 n y C30 C31 QD6 sing 295 n y C11 C12 QD6 sing 296 n n C11 C10 QD6 doub 297 n y C21 C22 QD6 doub 298 n y C21 C26 QD6 sing 299 n y C27 C10 QD6 sing 300 n y C27 C28 QD6 sing 301 n n C10 C04 QD6 sing 302 n n C22 N23 QD6 sing 303 n y C28 C34 QD6 doub 304 n y C04 C02 QD6 sing 305 n n C31 CL32 QD6 sing 306 n n C31 C33 QD6 doub 307 n y C26 N25 QD6 doub 308 n y N23 C24 QD6 sing 309 n n N23 N25 QD6 sing 310 n y C34 C33 QD6 sing 311 n y C02 O03 QD6 doub 312 n n C02 O01 QD6 sing 313 n n C20 H202 QD6 sing 314 n n C20 H201 QD6 sing 315 n n C22 H221 QD6 sing 316 n n C24 H243 QD6 sing 317 n n C24 H242 QD6 sing 318 n n C24 H241 QD6 sing 319 n n C26 H261 QD6 sing 320 n n C04 H041 QD6 sing 321 n n C07 H072 QD6 sing 322 n n C07 H071 QD6 sing 323 n n C07 H073 QD6 sing 324 n n C08 H082 QD6 sing 325 n n C08 H081 QD6 sing 326 n n C08 H083 QD6 sing 327 n n C09 H092 QD6 sing 328 n n C09 H093 QD6 sing 329 n n C09 H091 QD6 sing 330 n n C12 H122 QD6 sing 331 n n C12 H121 QD6 sing 332 n n C12 H123 QD6 sing 333 n n C16 H161 QD6 sing 334 n n C18 H183 QD6 sing 335 n n C18 H182 QD6 sing 336 n n C18 H181 QD6 sing 337 n n C29 H291 QD6 sing 338 n n C30 H301 QD6 sing 339 n n C33 H331 QD6 sing 340 n n C34 H341 QD6 sing 341 n n O01 H1 QD6 sing 342 n n # _atom_sites.entry_id 8T5B _atom_sites.fract_transf_matrix[1][1] 0.016141 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003059 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014289 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015938 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 QD6 A 1 301 1003 QD6 LIG . F 4 MG A 1 302 1 MG MG . G 3 QD6 B 1 301 802 QD6 LIG . H 4 MG B 1 302 2 MG MG . I 5 HOH A 1 401 19 HOH HOH . I 5 HOH A 2 402 7 HOH HOH . I 5 HOH A 3 403 60 HOH HOH . I 5 HOH A 4 404 11 HOH HOH . I 5 HOH A 5 405 4 HOH HOH . I 5 HOH A 6 406 17 HOH HOH . I 5 HOH A 7 407 3 HOH HOH . I 5 HOH A 8 408 5 HOH HOH . I 5 HOH A 9 409 40 HOH HOH . I 5 HOH A 10 410 38 HOH HOH . I 5 HOH A 11 411 32 HOH HOH . I 5 HOH A 12 412 70 HOH HOH . I 5 HOH A 13 413 30 HOH HOH . I 5 HOH A 14 414 49 HOH HOH . I 5 HOH A 15 415 53 HOH HOH . I 5 HOH A 16 416 62 HOH HOH . I 5 HOH A 17 417 21 HOH HOH . I 5 HOH A 18 418 26 HOH HOH . I 5 HOH A 19 419 13 HOH HOH . I 5 HOH A 20 420 25 HOH HOH . I 5 HOH A 21 421 65 HOH HOH . I 5 HOH A 22 422 33 HOH HOH . I 5 HOH A 23 423 75 HOH HOH . I 5 HOH A 24 424 36 HOH HOH . I 5 HOH A 25 425 57 HOH HOH . I 5 HOH A 26 426 34 HOH HOH . I 5 HOH A 27 427 28 HOH HOH . I 5 HOH A 28 428 23 HOH HOH . I 5 HOH A 29 429 18 HOH HOH . I 5 HOH A 30 430 16 HOH HOH . I 5 HOH A 31 431 52 HOH HOH . I 5 HOH A 32 432 50 HOH HOH . I 5 HOH A 33 433 66 HOH HOH . I 5 HOH A 34 434 51 HOH HOH . I 5 HOH A 35 435 72 HOH HOH . I 5 HOH A 36 436 73 HOH HOH . I 5 HOH A 37 437 83 HOH HOH . I 5 HOH A 38 438 76 HOH HOH . I 5 HOH A 39 439 69 HOH HOH . J 5 HOH B 1 401 20 HOH HOH . J 5 HOH B 2 402 10 HOH HOH . J 5 HOH B 3 403 22 HOH HOH . J 5 HOH B 4 404 14 HOH HOH . J 5 HOH B 5 405 9 HOH HOH . J 5 HOH B 6 406 58 HOH HOH . J 5 HOH B 7 407 12 HOH HOH . J 5 HOH B 8 408 35 HOH HOH . J 5 HOH B 9 409 80 HOH HOH . J 5 HOH B 10 410 55 HOH HOH . J 5 HOH B 11 411 39 HOH HOH . J 5 HOH B 12 412 8 HOH HOH . J 5 HOH B 13 413 41 HOH HOH . J 5 HOH B 14 414 59 HOH HOH . J 5 HOH B 15 415 27 HOH HOH . J 5 HOH B 16 416 29 HOH HOH . J 5 HOH B 17 417 15 HOH HOH . J 5 HOH B 18 418 43 HOH HOH . J 5 HOH B 19 419 64 HOH HOH . J 5 HOH B 20 420 67 HOH HOH . J 5 HOH B 21 421 47 HOH HOH . J 5 HOH B 22 422 61 HOH HOH . J 5 HOH B 23 423 1 HOH HOH . J 5 HOH B 24 424 42 HOH HOH . J 5 HOH B 25 425 31 HOH HOH . J 5 HOH B 26 426 81 HOH HOH . J 5 HOH B 27 427 63 HOH HOH . J 5 HOH B 28 428 84 HOH HOH . J 5 HOH B 29 429 77 HOH HOH . J 5 HOH B 30 430 74 HOH HOH . J 5 HOH B 31 431 71 HOH HOH . J 5 HOH B 32 432 79 HOH HOH . J 5 HOH B 33 433 78 HOH HOH . K 5 HOH C 1 301 2 HOH HOH . K 5 HOH C 2 302 48 HOH HOH . K 5 HOH C 3 303 37 HOH HOH . K 5 HOH C 4 304 46 HOH HOH . K 5 HOH C 5 305 68 HOH HOH . K 5 HOH C 6 306 82 HOH HOH . L 5 HOH D 1 301 6 HOH HOH . L 5 HOH D 2 302 56 HOH HOH . L 5 HOH D 3 303 45 HOH HOH . L 5 HOH D 4 304 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 QD6 . . . G 3 -14.681 5.453 14.277 1 34.01 ? C10 QD6 301 B 1 HETATM 2 C C15 QD6 . . . G 3 -15.517 3.793 12.516 1 34.22 ? C15 QD6 301 B 1 HETATM 3 C C17 QD6 . . . G 3 -16.949 2.21 11.501 1 36.27 ? C17 QD6 301 B 1 HETATM 4 C C20 QD6 . . . G 3 -18.83 2.058 13.293 1 39.2 ? C20 QD6 301 B 1 HETATM 5 C C21 QD6 . . . G 3 -18.53 0.817 14.302 1 37.62 ? C21 QD6 301 B 1 HETATM 6 C C22 QD6 . . . G 3 -18.522 -0.628 13.969 1 42.99 ? C22 QD6 301 B 1 HETATM 7 C C24 QD6 . . . G 3 -18.12 -2.824 15.256 1 44.06 ? C24 QD6 301 B 1 HETATM 8 C C26 QD6 . . . G 3 -18.222 0.888 15.74 1 37.42 ? C26 QD6 301 B 1 HETATM 9 C C28 QD6 . . . G 3 -13.231 5.061 12.042 1 32.05 ? C28 QD6 301 B 1 HETATM 10 C C02 QD6 . . . G 3 -14.092 7.809 14.837 1 33.21 ? C02 QD6 301 B 1 HETATM 11 C C04 QD6 . . . G 3 -13.604 6.465 14.792 1 29.67 ? C04 QD6 301 B 1 HETATM 12 C C06 QD6 . . . G 3 -12.254 4.907 16.238 1 32.66 ? C06 QD6 301 B 1 HETATM 13 C C07 QD6 . . . G 3 -11.711 4.92 17.765 1 30.38 ? C07 QD6 301 B 1 HETATM 14 C C08 QD6 . . . G 3 -10.985 5.015 15.227 1 31.53 ? C08 QD6 301 B 1 HETATM 15 C C09 QD6 . . . G 3 -13.001 3.516 15.989 1 30.56 ? C09 QD6 301 B 1 HETATM 16 C C11 QD6 . . . G 3 -15.867 5.129 15.069 1 32.49 ? C11 QD6 301 B 1 HETATM 17 C C12 QD6 . . . G 3 -16.122 5.839 16.51 1 32.19 ? C12 QD6 301 B 1 HETATM 18 C C14 QD6 . . . G 3 -16.652 3.553 13.356 1 31.11 ? C14 QD6 301 B 1 HETATM 19 C C16 QD6 . . . G 3 -15.688 2.942 11.305 1 32.38 ? C16 QD6 301 B 1 HETATM 20 C C18 QD6 . . . G 3 -17.608 1.131 10.458 1 36.34 ? C18 QD6 301 B 1 HETATM 21 C C27 QD6 . . . G 3 -14.496 4.763 12.977 1 32.91 ? C27 QD6 301 B 1 HETATM 22 C C29 QD6 . . . G 3 -12.251 4.024 11.749 1 31.13 ? C29 QD6 301 B 1 HETATM 23 C C30 QD6 . . . G 3 -11.127 4.355 10.901 1 30.41 ? C30 QD6 301 B 1 HETATM 24 C C31 QD6 . . . G 3 -11.014 5.704 10.37 1 32.83 ? C31 QD6 301 B 1 HETATM 25 C C33 QD6 . . . G 3 -11.995 6.738 10.664 1 33.34 ? C33 QD6 301 B 1 HETATM 26 C C34 QD6 . . . G 3 -13.118 6.407 11.507 1 31.13 ? C34 QD6 301 B 1 HETATM 27 N N13 QD6 . . . G 3 -16.81 4.209 14.603 1 34.65 ? N13 QD6 301 B 1 HETATM 28 N N19 QD6 . . . G 3 -17.485 2.591 12.715 1 35.26 ? N19 QD6 301 B 1 HETATM 29 N N23 QD6 . . . G 3 -18.232 -1.297 15.13 1 41.66 ? N23 QD6 301 B 1 HETATM 30 N N25 QD6 . . . G 3 -18.053 -0.405 16.183 1 44.09 ? N25 QD6 301 B 1 HETATM 31 O O01 QD6 . . . G 3 -13.548 8.669 15.681 1 31.52 ? O01 QD6 301 B 1 HETATM 32 O O03 QD6 . . . G 3 -15.074 8.193 14.031 1 36.4 ? O03 QD6 301 B 1 HETATM 33 O O05 QD6 . . . G 3 -13.21 6.1 16.069 1 32.71 ? O05 QD6 301 B 1 HETATM 34 CL CL32 QD6 . . . G 3 -9.575 6.136 9.282 1 37.99 ? CL32 QD6 301 B 1 HETATM 35 H H202 QD6 . . . G 3 -19.501 1.699 12.434 1 47.26 ? H202 QD6 301 B 1 HETATM 36 H H201 QD6 . . . G 3 -19.36 2.899 13.867 1 47.26 ? H201 QD6 301 B 1 HETATM 37 H H221 QD6 . . . G 3 -18.718 -1.092 12.946 1 51.82 ? H221 QD6 301 B 1 HETATM 38 H H243 QD6 . . . G 3 -17.967 -3.105 16.349 1 53.1 ? H243 QD6 301 B 1 HETATM 39 H H242 QD6 . . . G 3 -17.234 -3.192 14.642 1 53.1 ? H242 QD6 301 B 1 HETATM 40 H H241 QD6 . . . G 3 -19.076 -3.309 14.87 1 53.1 ? H241 QD6 301 B 1 HETATM 41 H H261 QD6 . . . G 3 -18.139 1.84 16.372 1 45.13 ? H261 QD6 301 B 1 HETATM 42 H H041 QD6 . . . G 3 -12.685 6.428 14.024 1 35.82 ? H041 QD6 301 B 1 HETATM 43 H H072 QD6 . . . G 3 -10.617 5.25 17.777 1 36.68 ? H072 QD6 301 B 1 HETATM 44 H H071 QD6 . . . G 3 -11.798 3.87 18.209 1 36.68 ? H071 QD6 301 B 1 HETATM 45 H H073 QD6 . . . G 3 -12.336 5.649 18.385 1 36.68 ? H073 QD6 301 B 1 HETATM 46 H H082 QD6 . . . G 3 -10.159 4.317 15.579 1 38.06 ? H082 QD6 301 B 1 HETATM 47 H H081 QD6 . . . G 3 -10.598 6.084 15.216 1 38.06 ? H081 QD6 301 B 1 HETATM 48 H H083 QD6 . . . G 3 -11.309 4.719 14.178 1 38.06 ? H083 QD6 301 B 1 HETATM 49 H H092 QD6 . . . G 3 -12.417 2.682 16.478 1 36.89 ? H092 QD6 301 B 1 HETATM 50 H H093 QD6 . . . G 3 -13.075 3.323 14.878 1 36.89 ? H093 QD6 301 B 1 HETATM 51 H H091 QD6 . . . G 3 -14.039 3.562 16.434 1 36.89 ? H091 QD6 301 B 1 HETATM 52 H H122 QD6 . . . G 3 -17.138 5.518 16.918 1 38.86 ? H122 QD6 301 B 1 HETATM 53 H H121 QD6 . . . G 3 -16.104 6.973 16.384 1 38.86 ? H121 QD6 301 B 1 HETATM 54 H H123 QD6 . . . G 3 -15.303 5.525 17.239 1 38.86 ? H123 QD6 301 B 1 HETATM 55 H H161 QD6 . . . G 3 -14.986 2.872 10.409 1 39.08 ? H161 QD6 301 B 1 HETATM 56 H H183 QD6 . . . G 3 -16.791 0.708 9.779 1 43.83 ? H183 QD6 301 B 1 HETATM 57 H H182 QD6 . . . G 3 -18.4 1.652 9.819 1 43.83 ? H182 QD6 301 B 1 HETATM 58 H H181 QD6 . . . G 3 -18.093 0.279 11.045 1 43.83 ? H181 QD6 301 B 1 HETATM 59 H H291 QD6 . . . G 3 -12.368 2.975 12.179 1 37.58 ? H291 QD6 301 B 1 HETATM 60 H H301 QD6 . . . G 3 -10.342 3.569 10.652 1 36.72 ? H301 QD6 301 B 1 HETATM 61 H H331 QD6 . . . G 3 -11.879 7.781 10.239 1 40.23 ? H331 QD6 301 B 1 HETATM 62 H H341 QD6 . . . G 3 -13.906 7.191 11.75 1 37.58 ? H341 QD6 301 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 62 #