data_8T5B # _model_server_result.job_id msOIaTXYnJLtd2PnT3DTlw _model_server_result.datetime_utc '2024-11-15 22:57:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t5b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":302}' # _entry.id 8T5B # _exptl.entry_id 8T5B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.73 _cell.angle_gamma 90 _cell.entry_id 8T5B _cell.length_a 61.954 _cell.length_b 69.984 _cell.length_c 63.858 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T5B _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 8 A ASP 64 1_555 F MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc2 A OD2 ASP 60 A ASP 116 1_555 F MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc3 B OD1 ASP 8 B ASP 64 1_555 H MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc4 B OD2 ASP 60 B ASP 116 1_555 H MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8T5B _atom_sites.fract_transf_matrix[1][1] 0.016141 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003059 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014289 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015938 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 QD6 A 1 301 1003 QD6 LIG . F 4 MG A 1 302 1 MG MG . G 3 QD6 B 1 301 802 QD6 LIG . H 4 MG B 1 302 2 MG MG . I 5 HOH A 1 401 19 HOH HOH . I 5 HOH A 2 402 7 HOH HOH . I 5 HOH A 3 403 60 HOH HOH . I 5 HOH A 4 404 11 HOH HOH . I 5 HOH A 5 405 4 HOH HOH . I 5 HOH A 6 406 17 HOH HOH . I 5 HOH A 7 407 3 HOH HOH . I 5 HOH A 8 408 5 HOH HOH . I 5 HOH A 9 409 40 HOH HOH . I 5 HOH A 10 410 38 HOH HOH . I 5 HOH A 11 411 32 HOH HOH . I 5 HOH A 12 412 70 HOH HOH . I 5 HOH A 13 413 30 HOH HOH . I 5 HOH A 14 414 49 HOH HOH . I 5 HOH A 15 415 53 HOH HOH . I 5 HOH A 16 416 62 HOH HOH . I 5 HOH A 17 417 21 HOH HOH . I 5 HOH A 18 418 26 HOH HOH . I 5 HOH A 19 419 13 HOH HOH . I 5 HOH A 20 420 25 HOH HOH . I 5 HOH A 21 421 65 HOH HOH . I 5 HOH A 22 422 33 HOH HOH . I 5 HOH A 23 423 75 HOH HOH . I 5 HOH A 24 424 36 HOH HOH . I 5 HOH A 25 425 57 HOH HOH . I 5 HOH A 26 426 34 HOH HOH . I 5 HOH A 27 427 28 HOH HOH . I 5 HOH A 28 428 23 HOH HOH . I 5 HOH A 29 429 18 HOH HOH . I 5 HOH A 30 430 16 HOH HOH . I 5 HOH A 31 431 52 HOH HOH . I 5 HOH A 32 432 50 HOH HOH . I 5 HOH A 33 433 66 HOH HOH . I 5 HOH A 34 434 51 HOH HOH . I 5 HOH A 35 435 72 HOH HOH . I 5 HOH A 36 436 73 HOH HOH . I 5 HOH A 37 437 83 HOH HOH . I 5 HOH A 38 438 76 HOH HOH . I 5 HOH A 39 439 69 HOH HOH . J 5 HOH B 1 401 20 HOH HOH . J 5 HOH B 2 402 10 HOH HOH . J 5 HOH B 3 403 22 HOH HOH . J 5 HOH B 4 404 14 HOH HOH . J 5 HOH B 5 405 9 HOH HOH . J 5 HOH B 6 406 58 HOH HOH . J 5 HOH B 7 407 12 HOH HOH . J 5 HOH B 8 408 35 HOH HOH . J 5 HOH B 9 409 80 HOH HOH . J 5 HOH B 10 410 55 HOH HOH . J 5 HOH B 11 411 39 HOH HOH . J 5 HOH B 12 412 8 HOH HOH . J 5 HOH B 13 413 41 HOH HOH . J 5 HOH B 14 414 59 HOH HOH . J 5 HOH B 15 415 27 HOH HOH . J 5 HOH B 16 416 29 HOH HOH . J 5 HOH B 17 417 15 HOH HOH . J 5 HOH B 18 418 43 HOH HOH . J 5 HOH B 19 419 64 HOH HOH . J 5 HOH B 20 420 67 HOH HOH . J 5 HOH B 21 421 47 HOH HOH . J 5 HOH B 22 422 61 HOH HOH . J 5 HOH B 23 423 1 HOH HOH . J 5 HOH B 24 424 42 HOH HOH . J 5 HOH B 25 425 31 HOH HOH . J 5 HOH B 26 426 81 HOH HOH . J 5 HOH B 27 427 63 HOH HOH . J 5 HOH B 28 428 84 HOH HOH . J 5 HOH B 29 429 77 HOH HOH . J 5 HOH B 30 430 74 HOH HOH . J 5 HOH B 31 431 71 HOH HOH . J 5 HOH B 32 432 79 HOH HOH . J 5 HOH B 33 433 78 HOH HOH . K 5 HOH C 1 301 2 HOH HOH . K 5 HOH C 2 302 48 HOH HOH . K 5 HOH C 3 303 37 HOH HOH . K 5 HOH C 4 304 46 HOH HOH . K 5 HOH C 5 305 68 HOH HOH . K 5 HOH C 6 306 82 HOH HOH . L 5 HOH D 1 301 6 HOH HOH . L 5 HOH D 2 302 56 HOH HOH . L 5 HOH D 3 303 45 HOH HOH . L 5 HOH D 4 304 24 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x 3.054 _atom_site.Cartn_y 23.402 _atom_site.Cartn_z 28.683 _atom_site.occupancy 0 _atom_site.B_iso_or_equiv 40.03 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 302 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #