data_8T5Z # _model_server_result.job_id b6jp5XlhB8Sj6vn3RtNIOg _model_server_result.datetime_utc '2024-11-06 14:24:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t5z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 8T5Z # _exptl.entry_id 8T5Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8T5Z _cell.length_a 75.82 _cell.length_b 75.82 _cell.length_c 122.262 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T5Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall 'P 62 2 (x,y,z+1/3)' _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 47 A HIS 41 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc2 A OE1 GLU 74 A GLU 80 1_555 C MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc3 A OD2 ASP 102 A ASP 108 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc4 A OD1 ASP 102 A ASP 108 1_555 C MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc5 A OE2 GLU 113 A GLU 119 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc6 A O ILE 114 A ILE 120 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc7 B MN MN . A MN 301 1_555 D O HOH . A HOH 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc8 B MN MN . A MN 301 1_555 D O HOH . A HOH 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc9 C MN MN . A MN 302 1_555 D O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc10 C MN MN . A MN 302 1_555 D O HOH . A HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc11 C MN MN . A MN 302 1_555 D O HOH . A HOH 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc12 C MN MN . A MN 302 1_555 D O HOH . A HOH 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8T5Z _atom_sites.fract_transf_matrix[1][1] 0.013189 _atom_sites.fract_transf_matrix[1][2] 0.007615 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015229 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008179 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 301 301 MN MN . C 2 MN A 1 302 302 MN MN . D 3 HOH A 1 401 7 HOH HOH . D 3 HOH A 2 402 45 HOH HOH . D 3 HOH A 3 403 4 HOH HOH . D 3 HOH A 4 404 36 HOH HOH . D 3 HOH A 5 405 8 HOH HOH . D 3 HOH A 6 406 19 HOH HOH . D 3 HOH A 7 407 38 HOH HOH . D 3 HOH A 8 408 14 HOH HOH . D 3 HOH A 9 409 47 HOH HOH . D 3 HOH A 10 410 46 HOH HOH . D 3 HOH A 11 411 5 HOH HOH . D 3 HOH A 12 412 10 HOH HOH . D 3 HOH A 13 413 15 HOH HOH . D 3 HOH A 14 414 35 HOH HOH . D 3 HOH A 15 415 17 HOH HOH . D 3 HOH A 16 416 30 HOH HOH . D 3 HOH A 17 417 21 HOH HOH . D 3 HOH A 18 418 12 HOH HOH . D 3 HOH A 19 419 24 HOH HOH . D 3 HOH A 20 420 6 HOH HOH . D 3 HOH A 21 421 44 HOH HOH . D 3 HOH A 22 422 37 HOH HOH . D 3 HOH A 23 423 40 HOH HOH . D 3 HOH A 24 424 49 HOH HOH . D 3 HOH A 25 425 9 HOH HOH . D 3 HOH A 26 426 18 HOH HOH . D 3 HOH A 27 427 1 HOH HOH . D 3 HOH A 28 428 16 HOH HOH . D 3 HOH A 29 429 25 HOH HOH . D 3 HOH A 30 430 31 HOH HOH . D 3 HOH A 31 431 20 HOH HOH . D 3 HOH A 32 432 33 HOH HOH . D 3 HOH A 33 433 41 HOH HOH . D 3 HOH A 34 434 27 HOH HOH . D 3 HOH A 35 435 22 HOH HOH . D 3 HOH A 36 436 13 HOH HOH . D 3 HOH A 37 437 48 HOH HOH . D 3 HOH A 38 438 2 HOH HOH . D 3 HOH A 39 439 23 HOH HOH . D 3 HOH A 40 440 28 HOH HOH . D 3 HOH A 41 441 11 HOH HOH . D 3 HOH A 42 442 3 HOH HOH . D 3 HOH A 43 443 42 HOH HOH . D 3 HOH A 44 444 29 HOH HOH . D 3 HOH A 45 445 39 HOH HOH . D 3 HOH A 46 446 32 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 17.6 _atom_site.Cartn_y 15.453 _atom_site.Cartn_z -12.89 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 53.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #