data_8T6U # _model_server_result.job_id XCt0Oomlg-BGJSIVFXx3Jw _model_server_result.datetime_utc '2024-11-08 21:10:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t6u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":2201}' # _entry.id 8T6U # _exptl.entry_id 8T6U _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8T6U _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T6U _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 I N N ? 3 J N N ? 3 L N N ? 3 M N N ? 3 O N N ? 3 P N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C NAG 1 D 1 NAG A 2401 NAG 2 n C NAG 2 D 2 NAG A 2402 NAG 2 n D NAG 1 L 1 NAG B 2401 NAG 2 n D NAG 2 L 2 NAG B 2402 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A ND2 ASN 274 A ASN 642 1_555 C C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 B ND2 ASN 274 B ASN 642 1_555 D C1 NAG . L NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale3 C O4 NAG . D NAG 1 1_555 C C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.505 ? covale ? covale4 D O4 NAG . L NAG 1 1_555 D C1 NAG . L NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.508 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 8T6U _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 CLR A 1 2201 2201 CLR CLR . F 3 CLR A 1 2202 2202 CLR CLR . G 4 PC1 A 1 2203 2301 PC1 PC1 . H 5 H9F A 1 2204 2101 H9F DP1 . I 3 CLR A 1 2205 2203 CLR CLR . J 3 CLR A 1 2206 2204 CLR CLR . K 4 PC1 A 1 2207 2301 PC1 PC1 . L 3 CLR B 1 2201 2201 CLR CLR . M 3 CLR B 1 2202 2202 CLR CLR . N 5 H9F B 1 2203 2101 H9F DP1 . O 3 CLR B 1 2204 2203 CLR CLR . P 3 CLR B 1 2205 2204 CLR CLR . Q 6 HOH A 1 2301 18 HOH HOH . Q 6 HOH A 2 2302 6 HOH HOH . Q 6 HOH A 3 2303 13 HOH HOH . Q 6 HOH A 4 2304 24 HOH HOH . Q 6 HOH A 5 2305 20 HOH HOH . Q 6 HOH A 6 2306 17 HOH HOH . Q 6 HOH A 7 2307 23 HOH HOH . Q 6 HOH A 8 2308 26 HOH HOH . Q 6 HOH A 9 2309 8 HOH HOH . Q 6 HOH A 10 2310 9 HOH HOH . Q 6 HOH A 11 2311 3 HOH HOH . Q 6 HOH A 12 2312 30 HOH HOH . Q 6 HOH A 13 2313 34 HOH HOH . Q 6 HOH A 14 2314 1 HOH HOH . Q 6 HOH A 15 2315 10 HOH HOH . Q 6 HOH A 16 2316 15 HOH HOH . Q 6 HOH A 17 2317 28 HOH HOH . Q 6 HOH A 18 2318 36 HOH HOH . Q 6 HOH A 19 2319 32 HOH HOH . R 6 HOH B 1 2301 19 HOH HOH . R 6 HOH B 2 2302 5 HOH HOH . R 6 HOH B 3 2303 22 HOH HOH . R 6 HOH B 4 2304 12 HOH HOH . R 6 HOH B 5 2305 21 HOH HOH . R 6 HOH B 6 2306 16 HOH HOH . R 6 HOH B 7 2307 25 HOH HOH . R 6 HOH B 8 2308 7 HOH HOH . R 6 HOH B 9 2309 4 HOH HOH . R 6 HOH B 10 2310 2 HOH HOH . R 6 HOH B 11 2311 35 HOH HOH . R 6 HOH B 12 2312 31 HOH HOH . R 6 HOH B 13 2313 11 HOH HOH . R 6 HOH B 14 2314 14 HOH HOH . R 6 HOH B 15 2315 29 HOH HOH . R 6 HOH B 16 2316 37 HOH HOH . R 6 HOH B 17 2317 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . L 3 158.439 194.882 194.459 1 143.64 ? C1 CLR 2201 B 1 HETATM 2 C C2 CLR . . . L 3 157.638 194.705 193.167 1 139.36 ? C2 CLR 2201 B 1 HETATM 3 C C3 CLR . . . L 3 158.242 193.651 192.272 1 135.94 ? C3 CLR 2201 B 1 HETATM 4 C C4 CLR . . . L 3 158.355 192.343 193.031 1 136.47 ? C4 CLR 2201 B 1 HETATM 5 C C5 CLR . . . L 3 159.15 192.477 194.314 1 142.15 ? C5 CLR 2201 B 1 HETATM 6 C C6 CLR . . . L 3 160.153 191.651 194.592 1 128.06 ? C6 CLR 2201 B 1 HETATM 7 C C7 CLR . . . L 3 160.924 191.606 195.879 1 115.44 ? C7 CLR 2201 B 1 HETATM 8 C C8 CLR . . . L 3 160.414 192.579 196.941 1 119.62 ? C8 CLR 2201 B 1 HETATM 9 C C9 CLR . . . L 3 159.811 193.859 196.321 1 132.29 ? C9 CLR 2201 B 1 HETATM 10 C C10 CLR . . . L 3 158.696 193.583 195.266 1 149.63 ? C10 CLR 2201 B 1 HETATM 11 C C11 CLR . . . L 3 159.337 194.796 197.448 1 135.24 ? C11 CLR 2201 B 1 HETATM 12 C C12 CLR . . . L 3 160.442 195.155 198.449 1 139.84 ? C12 CLR 2201 B 1 HETATM 13 C C13 CLR . . . L 3 161.105 193.915 199.054 1 123.64 ? C13 CLR 2201 B 1 HETATM 14 C C14 CLR . . . L 3 161.537 193.005 197.885 1 119.99 ? C14 CLR 2201 B 1 HETATM 15 C C15 CLR . . . L 3 162.433 191.954 198.531 1 112.34 ? C15 CLR 2201 B 1 HETATM 16 C C16 CLR . . . L 3 163.064 192.674 199.733 1 112.44 ? C16 CLR 2201 B 1 HETATM 17 C C17 CLR . . . L 3 162.487 194.111 199.757 1 123.64 ? C17 CLR 2201 B 1 HETATM 18 C C18 CLR . . . L 3 160.104 193.248 200.003 1 128.3 ? C18 CLR 2201 B 1 HETATM 19 C C19 CLR . . . L 3 157.384 193.136 195.948 1 159.55 ? C19 CLR 2201 B 1 HETATM 20 C C20 CLR . . . L 3 162.549 194.751 201.161 1 123.8 ? C20 CLR 2201 B 1 HETATM 21 C C21 CLR . . . L 3 161.985 196.173 201.187 1 141.36 ? C21 CLR 2201 B 1 HETATM 22 C C22 CLR . . . L 3 163.983 194.756 201.721 1 110.69 ? C22 CLR 2201 B 1 HETATM 23 C C23 CLR . . . L 3 164.109 195.185 203.154 1 118.17 ? C23 CLR 2201 B 1 HETATM 24 C C24 CLR . . . L 3 165.365 194.725 203.858 1 116.22 ? C24 CLR 2201 B 1 HETATM 25 C C25 CLR . . . L 3 165.334 194.869 205.403 1 129.64 ? C25 CLR 2201 B 1 HETATM 26 C C26 CLR . . . L 3 164.675 193.669 206.069 1 130.93 ? C26 CLR 2201 B 1 HETATM 27 C C27 CLR . . . L 3 164.619 196.14 205.855 1 132.53 ? C27 CLR 2201 B 1 HETATM 28 O O1 CLR . . . L 3 157.437 193.487 191.094 1 144.68 ? O1 CLR 2201 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #