data_8T73 # _model_server_result.job_id xY_Fxh6sr8K53zJO3jMcBg _model_server_result.datetime_utc '2025-09-04 17:59:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t73 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 8T73 # _exptl.entry_id 8T73 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8T73 _cell.length_a 84.779 _cell.length_b 84.779 _cell.length_c 41.735 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T73 _symmetry.cell_setting ? _symmetry.Int_Tables_number 143 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 18 A SER 17 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc2 C O2B GDP . A GDP 201 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc3 D MG MG . A MG 202 1_555 G O HOH . A HOH 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc4 D MG MG . A MG 202 1_555 G O HOH . A HOH 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc5 D MG MG . A MG 202 1_555 G O HOH . A HOH 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc6 D MG MG . A MG 202 1_555 G O HOH . A HOH 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc7 B OG SER 18 B SER 17 1_555 F MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc8 E O2B GDP . B GDP 201 1_555 F MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc9 F MG MG . B MG 202 1_555 H O HOH . B HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc10 F MG MG . B MG 202 1_555 H O HOH . B HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc11 F MG MG . B MG 202 1_555 H O HOH . B HOH 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc12 F MG MG . B MG 202 1_555 H O HOH . B HOH 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 8T73 _atom_sites.fract_transf_matrix[1][1] 0.011795 _atom_sites.fract_transf_matrix[1][2] 0.00681 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01362 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023961 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GDP A 1 201 201 GDP GDP . D 3 MG A 1 202 202 MG MG . E 2 GDP B 1 201 201 GDP GDP . F 3 MG B 1 202 202 MG MG . G 4 HOH A 1 301 107 HOH HOH . G 4 HOH A 2 302 283 HOH HOH . G 4 HOH A 3 303 178 HOH HOH . G 4 HOH A 4 304 298 HOH HOH . G 4 HOH A 5 305 56 HOH HOH . G 4 HOH A 6 306 195 HOH HOH . G 4 HOH A 7 307 69 HOH HOH . G 4 HOH A 8 308 343 HOH HOH . G 4 HOH A 9 309 138 HOH HOH . G 4 HOH A 10 310 124 HOH HOH . G 4 HOH A 11 311 105 HOH HOH . G 4 HOH A 12 312 210 HOH HOH . G 4 HOH A 13 313 270 HOH HOH . G 4 HOH A 14 314 156 HOH HOH . G 4 HOH A 15 315 194 HOH HOH . G 4 HOH A 16 316 94 HOH HOH . G 4 HOH A 17 317 100 HOH HOH . G 4 HOH A 18 318 166 HOH HOH . G 4 HOH A 19 319 331 HOH HOH . G 4 HOH A 20 320 226 HOH HOH . G 4 HOH A 21 321 203 HOH HOH . G 4 HOH A 22 322 293 HOH HOH . G 4 HOH A 23 323 89 HOH HOH . G 4 HOH A 24 324 98 HOH HOH . G 4 HOH A 25 325 126 HOH HOH . G 4 HOH A 26 326 19 HOH HOH . G 4 HOH A 27 327 287 HOH HOH . G 4 HOH A 28 328 211 HOH HOH . G 4 HOH A 29 329 139 HOH HOH . G 4 HOH A 30 330 58 HOH HOH . G 4 HOH A 31 331 330 HOH HOH . G 4 HOH A 32 332 187 HOH HOH . G 4 HOH A 33 333 157 HOH HOH . G 4 HOH A 34 334 7 HOH HOH . G 4 HOH A 35 335 5 HOH HOH . G 4 HOH A 36 336 271 HOH HOH . G 4 HOH A 37 337 34 HOH HOH . G 4 HOH A 38 338 14 HOH HOH . G 4 HOH A 39 339 208 HOH HOH . G 4 HOH A 40 340 92 HOH HOH . G 4 HOH A 41 341 11 HOH HOH . G 4 HOH A 42 342 72 HOH HOH . G 4 HOH A 43 343 27 HOH HOH . G 4 HOH A 44 344 225 HOH HOH . G 4 HOH A 45 345 93 HOH HOH . G 4 HOH A 46 346 24 HOH HOH . G 4 HOH A 47 347 170 HOH HOH . G 4 HOH A 48 348 9 HOH HOH . G 4 HOH A 49 349 265 HOH HOH . G 4 HOH A 50 350 274 HOH HOH . G 4 HOH A 51 351 143 HOH HOH . G 4 HOH A 52 352 192 HOH HOH . G 4 HOH A 53 353 36 HOH HOH . G 4 HOH A 54 354 61 HOH HOH . G 4 HOH A 55 355 90 HOH HOH . G 4 HOH A 56 356 183 HOH HOH . G 4 HOH A 57 357 32 HOH HOH . G 4 HOH A 58 358 52 HOH HOH . G 4 HOH A 59 359 151 HOH HOH . G 4 HOH A 60 360 279 HOH HOH . G 4 HOH A 61 361 134 HOH HOH . G 4 HOH A 62 362 84 HOH HOH . G 4 HOH A 63 363 30 HOH HOH . G 4 HOH A 64 364 218 HOH HOH . G 4 HOH A 65 365 103 HOH HOH . G 4 HOH A 66 366 10 HOH HOH . G 4 HOH A 67 367 48 HOH HOH . G 4 HOH A 68 368 275 HOH HOH . G 4 HOH A 69 369 12 HOH HOH . G 4 HOH A 70 370 249 HOH HOH . G 4 HOH A 71 371 33 HOH HOH . G 4 HOH A 72 372 8 HOH HOH . G 4 HOH A 73 373 202 HOH HOH . G 4 HOH A 74 374 41 HOH HOH . G 4 HOH A 75 375 280 HOH HOH . G 4 HOH A 76 376 288 HOH HOH . G 4 HOH A 77 377 118 HOH HOH . G 4 HOH A 78 378 13 HOH HOH . G 4 HOH A 79 379 232 HOH HOH . G 4 HOH A 80 380 186 HOH HOH . G 4 HOH A 81 381 18 HOH HOH . G 4 HOH A 82 382 294 HOH HOH . G 4 HOH A 83 383 150 HOH HOH . G 4 HOH A 84 384 175 HOH HOH . G 4 HOH A 85 385 6 HOH HOH . G 4 HOH A 86 386 199 HOH HOH . G 4 HOH A 87 387 20 HOH HOH . G 4 HOH A 88 388 291 HOH HOH . G 4 HOH A 89 389 77 HOH HOH . G 4 HOH A 90 390 305 HOH HOH . G 4 HOH A 91 391 292 HOH HOH . G 4 HOH A 92 392 204 HOH HOH . G 4 HOH A 93 393 76 HOH HOH . G 4 HOH A 94 394 149 HOH HOH . G 4 HOH A 95 395 196 HOH HOH . G 4 HOH A 96 396 51 HOH HOH . G 4 HOH A 97 397 341 HOH HOH . G 4 HOH A 98 398 21 HOH HOH . G 4 HOH A 99 399 109 HOH HOH . G 4 HOH A 100 400 177 HOH HOH . G 4 HOH A 101 401 276 HOH HOH . G 4 HOH A 102 402 23 HOH HOH . G 4 HOH A 103 403 308 HOH HOH . G 4 HOH A 104 404 169 HOH HOH . G 4 HOH A 105 405 327 HOH HOH . G 4 HOH A 106 406 181 HOH HOH . G 4 HOH A 107 407 176 HOH HOH . G 4 HOH A 108 408 278 HOH HOH . G 4 HOH A 109 409 289 HOH HOH . G 4 HOH A 110 410 173 HOH HOH . G 4 HOH A 111 411 221 HOH HOH . G 4 HOH A 112 412 49 HOH HOH . G 4 HOH A 113 413 307 HOH HOH . G 4 HOH A 114 414 57 HOH HOH . G 4 HOH A 115 415 144 HOH HOH . G 4 HOH A 116 416 120 HOH HOH . G 4 HOH A 117 417 212 HOH HOH . G 4 HOH A 118 418 228 HOH HOH . G 4 HOH A 119 419 224 HOH HOH . G 4 HOH A 120 420 137 HOH HOH . G 4 HOH A 121 421 22 HOH HOH . G 4 HOH A 122 422 164 HOH HOH . G 4 HOH A 123 423 54 HOH HOH . G 4 HOH A 124 424 25 HOH HOH . G 4 HOH A 125 425 182 HOH HOH . G 4 HOH A 126 426 340 HOH HOH . G 4 HOH A 127 427 66 HOH HOH . G 4 HOH A 128 428 272 HOH HOH . G 4 HOH A 129 429 70 HOH HOH . G 4 HOH A 130 430 296 HOH HOH . G 4 HOH A 131 431 297 HOH HOH . G 4 HOH A 132 432 302 HOH HOH . G 4 HOH A 133 433 129 HOH HOH . G 4 HOH A 134 434 216 HOH HOH . G 4 HOH A 135 435 227 HOH HOH . G 4 HOH A 136 436 73 HOH HOH . G 4 HOH A 137 437 136 HOH HOH . G 4 HOH A 138 438 188 HOH HOH . G 4 HOH A 139 439 315 HOH HOH . G 4 HOH A 140 440 328 HOH HOH . G 4 HOH A 141 441 236 HOH HOH . G 4 HOH A 142 442 130 HOH HOH . G 4 HOH A 143 443 141 HOH HOH . G 4 HOH A 144 444 172 HOH HOH . G 4 HOH A 145 445 222 HOH HOH . G 4 HOH A 146 446 79 HOH HOH . G 4 HOH A 147 447 179 HOH HOH . G 4 HOH A 148 448 190 HOH HOH . G 4 HOH A 149 449 180 HOH HOH . G 4 HOH A 150 450 333 HOH HOH . G 4 HOH A 151 451 239 HOH HOH . G 4 HOH A 152 452 242 HOH HOH . G 4 HOH A 153 453 300 HOH HOH . G 4 HOH A 154 454 267 HOH HOH . G 4 HOH A 155 455 264 HOH HOH . G 4 HOH A 156 456 348 HOH HOH . G 4 HOH A 157 457 299 HOH HOH . G 4 HOH A 158 458 243 HOH HOH . G 4 HOH A 159 459 123 HOH HOH . G 4 HOH A 160 460 246 HOH HOH . G 4 HOH A 161 461 329 HOH HOH . G 4 HOH A 162 462 201 HOH HOH . G 4 HOH A 163 463 325 HOH HOH . G 4 HOH A 164 464 127 HOH HOH . G 4 HOH A 165 465 114 HOH HOH . G 4 HOH A 166 466 102 HOH HOH . G 4 HOH A 167 467 132 HOH HOH . G 4 HOH A 168 468 306 HOH HOH . G 4 HOH A 169 469 321 HOH HOH . G 4 HOH A 170 470 319 HOH HOH . G 4 HOH A 171 471 240 HOH HOH . G 4 HOH A 172 472 235 HOH HOH . G 4 HOH A 173 473 322 HOH HOH . G 4 HOH A 174 474 248 HOH HOH . G 4 HOH A 175 475 80 HOH HOH . G 4 HOH A 176 476 191 HOH HOH . G 4 HOH A 177 477 15 HOH HOH . G 4 HOH A 178 478 142 HOH HOH . G 4 HOH A 179 479 244 HOH HOH . G 4 HOH A 180 480 16 HOH HOH . G 4 HOH A 181 481 63 HOH HOH . G 4 HOH A 182 482 312 HOH HOH . G 4 HOH A 183 483 314 HOH HOH . G 4 HOH A 184 484 337 HOH HOH . G 4 HOH A 185 485 112 HOH HOH . G 4 HOH A 186 486 206 HOH HOH . H 4 HOH B 1 301 260 HOH HOH . H 4 HOH B 2 302 345 HOH HOH . H 4 HOH B 3 303 83 HOH HOH . H 4 HOH B 4 304 256 HOH HOH . H 4 HOH B 5 305 252 HOH HOH . H 4 HOH B 6 306 316 HOH HOH . H 4 HOH B 7 307 335 HOH HOH . H 4 HOH B 8 308 145 HOH HOH . H 4 HOH B 9 309 174 HOH HOH . H 4 HOH B 10 310 59 HOH HOH . H 4 HOH B 11 311 193 HOH HOH . H 4 HOH B 12 312 171 HOH HOH . H 4 HOH B 13 313 285 HOH HOH . H 4 HOH B 14 314 155 HOH HOH . H 4 HOH B 15 315 247 HOH HOH . H 4 HOH B 16 316 220 HOH HOH . H 4 HOH B 17 317 101 HOH HOH . H 4 HOH B 18 318 131 HOH HOH . H 4 HOH B 19 319 234 HOH HOH . H 4 HOH B 20 320 163 HOH HOH . H 4 HOH B 21 321 266 HOH HOH . H 4 HOH B 22 322 184 HOH HOH . H 4 HOH B 23 323 253 HOH HOH . H 4 HOH B 24 324 303 HOH HOH . H 4 HOH B 25 325 68 HOH HOH . H 4 HOH B 26 326 133 HOH HOH . H 4 HOH B 27 327 320 HOH HOH . H 4 HOH B 28 328 3 HOH HOH . H 4 HOH B 29 329 213 HOH HOH . H 4 HOH B 30 330 2 HOH HOH . H 4 HOH B 31 331 53 HOH HOH . H 4 HOH B 32 332 117 HOH HOH . H 4 HOH B 33 333 162 HOH HOH . H 4 HOH B 34 334 338 HOH HOH . H 4 HOH B 35 335 74 HOH HOH . H 4 HOH B 36 336 65 HOH HOH . H 4 HOH B 37 337 269 HOH HOH . H 4 HOH B 38 338 75 HOH HOH . H 4 HOH B 39 339 40 HOH HOH . H 4 HOH B 40 340 26 HOH HOH . H 4 HOH B 41 341 38 HOH HOH . H 4 HOH B 42 342 39 HOH HOH . H 4 HOH B 43 343 304 HOH HOH . H 4 HOH B 44 344 86 HOH HOH . H 4 HOH B 45 345 168 HOH HOH . H 4 HOH B 46 346 29 HOH HOH . H 4 HOH B 47 347 37 HOH HOH . H 4 HOH B 48 348 85 HOH HOH . H 4 HOH B 49 349 230 HOH HOH . H 4 HOH B 50 350 43 HOH HOH . H 4 HOH B 51 351 268 HOH HOH . H 4 HOH B 52 352 31 HOH HOH . H 4 HOH B 53 353 91 HOH HOH . H 4 HOH B 54 354 146 HOH HOH . H 4 HOH B 55 355 62 HOH HOH . H 4 HOH B 56 356 200 HOH HOH . H 4 HOH B 57 357 262 HOH HOH . H 4 HOH B 58 358 28 HOH HOH . H 4 HOH B 59 359 281 HOH HOH . H 4 HOH B 60 360 113 HOH HOH . H 4 HOH B 61 361 110 HOH HOH . H 4 HOH B 62 362 4 HOH HOH . H 4 HOH B 63 363 273 HOH HOH . H 4 HOH B 64 364 1 HOH HOH . H 4 HOH B 65 365 95 HOH HOH . H 4 HOH B 66 366 17 HOH HOH . H 4 HOH B 67 367 106 HOH HOH . H 4 HOH B 68 368 217 HOH HOH . H 4 HOH B 69 369 119 HOH HOH . H 4 HOH B 70 370 42 HOH HOH . H 4 HOH B 71 371 35 HOH HOH . H 4 HOH B 72 372 165 HOH HOH . H 4 HOH B 73 373 205 HOH HOH . H 4 HOH B 74 374 197 HOH HOH . H 4 HOH B 75 375 67 HOH HOH . H 4 HOH B 76 376 46 HOH HOH . H 4 HOH B 77 377 282 HOH HOH . H 4 HOH B 78 378 47 HOH HOH . H 4 HOH B 79 379 238 HOH HOH . H 4 HOH B 80 380 301 HOH HOH . H 4 HOH B 81 381 342 HOH HOH . H 4 HOH B 82 382 88 HOH HOH . H 4 HOH B 83 383 160 HOH HOH . H 4 HOH B 84 384 185 HOH HOH . H 4 HOH B 85 385 214 HOH HOH . H 4 HOH B 86 386 81 HOH HOH . H 4 HOH B 87 387 135 HOH HOH . H 4 HOH B 88 388 158 HOH HOH . H 4 HOH B 89 389 97 HOH HOH . H 4 HOH B 90 390 108 HOH HOH . H 4 HOH B 91 391 229 HOH HOH . H 4 HOH B 92 392 263 HOH HOH . H 4 HOH B 93 393 295 HOH HOH . H 4 HOH B 94 394 115 HOH HOH . H 4 HOH B 95 395 167 HOH HOH . H 4 HOH B 96 396 161 HOH HOH . H 4 HOH B 97 397 154 HOH HOH . H 4 HOH B 98 398 87 HOH HOH . H 4 HOH B 99 399 55 HOH HOH . H 4 HOH B 100 400 237 HOH HOH . H 4 HOH B 101 401 50 HOH HOH . H 4 HOH B 102 402 125 HOH HOH . H 4 HOH B 103 403 44 HOH HOH . H 4 HOH B 104 404 152 HOH HOH . H 4 HOH B 105 405 111 HOH HOH . H 4 HOH B 106 406 290 HOH HOH . H 4 HOH B 107 407 45 HOH HOH . H 4 HOH B 108 408 82 HOH HOH . H 4 HOH B 109 409 219 HOH HOH . H 4 HOH B 110 410 198 HOH HOH . H 4 HOH B 111 411 231 HOH HOH . H 4 HOH B 112 412 159 HOH HOH . H 4 HOH B 113 413 64 HOH HOH . H 4 HOH B 114 414 250 HOH HOH . H 4 HOH B 115 415 96 HOH HOH . H 4 HOH B 116 416 104 HOH HOH . H 4 HOH B 117 417 121 HOH HOH . H 4 HOH B 118 418 60 HOH HOH . H 4 HOH B 119 419 286 HOH HOH . H 4 HOH B 120 420 153 HOH HOH . H 4 HOH B 121 421 255 HOH HOH . H 4 HOH B 122 422 251 HOH HOH . H 4 HOH B 123 423 309 HOH HOH . H 4 HOH B 124 424 346 HOH HOH . H 4 HOH B 125 425 259 HOH HOH . H 4 HOH B 126 426 245 HOH HOH . H 4 HOH B 127 427 277 HOH HOH . H 4 HOH B 128 428 78 HOH HOH . H 4 HOH B 129 429 148 HOH HOH . H 4 HOH B 130 430 284 HOH HOH . H 4 HOH B 131 431 310 HOH HOH . H 4 HOH B 132 432 334 HOH HOH . H 4 HOH B 133 433 257 HOH HOH . H 4 HOH B 134 434 326 HOH HOH . H 4 HOH B 135 435 324 HOH HOH . H 4 HOH B 136 436 207 HOH HOH . H 4 HOH B 137 437 128 HOH HOH . H 4 HOH B 138 438 116 HOH HOH . H 4 HOH B 139 439 317 HOH HOH . H 4 HOH B 140 440 254 HOH HOH . H 4 HOH B 141 441 336 HOH HOH . H 4 HOH B 142 442 189 HOH HOH . H 4 HOH B 143 443 311 HOH HOH . H 4 HOH B 144 444 258 HOH HOH . H 4 HOH B 145 445 122 HOH HOH . H 4 HOH B 146 446 71 HOH HOH . H 4 HOH B 147 447 147 HOH HOH . H 4 HOH B 148 448 323 HOH HOH . H 4 HOH B 149 449 241 HOH HOH . H 4 HOH B 150 450 332 HOH HOH . H 4 HOH B 151 451 140 HOH HOH . H 4 HOH B 152 452 339 HOH HOH . H 4 HOH B 153 453 261 HOH HOH . H 4 HOH B 154 454 313 HOH HOH . H 4 HOH B 155 455 223 HOH HOH . H 4 HOH B 156 456 209 HOH HOH . H 4 HOH B 157 457 99 HOH HOH . H 4 HOH B 158 458 344 HOH HOH . H 4 HOH B 159 459 215 HOH HOH . H 4 HOH B 160 460 318 HOH HOH . H 4 HOH B 161 461 347 HOH HOH . H 4 HOH B 162 462 233 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . C 2 15.89 -44.244 -29.649 1 14.52 ? PB GDP 201 A 1 HETATM 2 O O1B GDP . . . C 2 14.825 -44.484 -30.717 1 16.06 ? O1B GDP 201 A 1 HETATM 3 O O2B GDP . . . C 2 17.282 -44.056 -30.167 1 14.22 ? O2B GDP 201 A 1 HETATM 4 O O3B GDP . . . C 2 15.772 -45.232 -28.477 1 14.19 ? O3B GDP 201 A 1 HETATM 5 O O3A GDP . . . C 2 15.497 -42.802 -28.956 1 14.06 ? O3A GDP 201 A 1 HETATM 6 P PA GDP . . . C 2 15.969 -41.326 -29.214 1 15.2 ? PA GDP 201 A 1 HETATM 7 O O1A GDP . . . C 2 15.811 -41.044 -30.665 1 16.21 ? O1A GDP 201 A 1 HETATM 8 O O2A GDP . . . C 2 17.281 -41.109 -28.56 1 15.39 ? O2A GDP 201 A 1 HETATM 9 O O5' GDP . . . C 2 14.863 -40.471 -28.36 1 16.38 ? O5' GDP 201 A 1 HETATM 10 C C5' GDP . . . C 2 13.463 -40.575 -28.71 1 15 ? C5' GDP 201 A 1 HETATM 11 C C4' GDP . . . C 2 12.77 -39.295 -28.212 1 18.31 ? C4' GDP 201 A 1 HETATM 12 O O4' GDP . . . C 2 12.858 -39.14 -26.762 1 16.9 ? O4' GDP 201 A 1 HETATM 13 C C3' GDP . . . C 2 13.44 -38.052 -28.792 1 22.55 ? C3' GDP 201 A 1 HETATM 14 O O3' GDP . . . C 2 12.392 -37.136 -29.03 1 28.82 ? O3' GDP 201 A 1 HETATM 15 C C2' GDP . . . C 2 14.389 -37.588 -27.653 1 17.03 ? C2' GDP 201 A 1 HETATM 16 O O2' GDP . . . C 2 14.497 -36.181 -27.711 1 28.57 ? O2' GDP 201 A 1 HETATM 17 C C1' GDP . . . C 2 13.561 -37.95 -26.47 1 15.44 ? C1' GDP 201 A 1 HETATM 18 N N9 GDP . . . C 2 14.369 -38.272 -25.327 1 14.75 ? N9 GDP 201 A 1 HETATM 19 C C8 GDP . . . C 2 15.445 -39.218 -25.236 1 14.36 ? C8 GDP 201 A 1 HETATM 20 N N7 GDP . . . C 2 15.878 -39.325 -23.998 1 14.68 ? N7 GDP 201 A 1 HETATM 21 C C5 GDP . . . C 2 15.12 -38.441 -23.246 1 16.53 ? C5 GDP 201 A 1 HETATM 22 C C6 GDP . . . C 2 15.201 -38.153 -21.86 1 14 ? C6 GDP 201 A 1 HETATM 23 O O6 GDP . . . C 2 15.915 -38.598 -20.955 1 17.42 ? O6 GDP 201 A 1 HETATM 24 N N1 GDP . . . C 2 14.235 -37.183 -21.464 1 16.29 ? N1 GDP 201 A 1 HETATM 25 C C2 GDP . . . C 2 13.328 -36.646 -22.365 1 15.31 ? C2 GDP 201 A 1 HETATM 26 N N2 GDP . . . C 2 12.461 -35.722 -21.816 1 18.63 ? N2 GDP 201 A 1 HETATM 27 N N3 GDP . . . C 2 13.227 -36.874 -23.655 1 14.61 ? N3 GDP 201 A 1 HETATM 28 C C4 GDP . . . C 2 14.164 -37.818 -24.068 1 13.03 ? C4 GDP 201 A 1 HETATM 29 H H5' GDP . . . C 2 13.274 -40.657 -29.811 1 18.01 ? H5' GDP 201 A 1 HETATM 30 H "H5''" GDP . . . C 2 12.94 -41.448 -28.242 1 18.01 ? "H5''" GDP 201 A 1 HETATM 31 H H4' GDP . . . C 2 11.679 -39.33 -28.415 1 21.98 ? H4' GDP 201 A 1 HETATM 32 H H3' GDP . . . C 2 14.105 -38.328 -29.666 1 27.06 ? H3' GDP 201 A 1 HETATM 33 H HO3' GDP . . . C 2 12.838 -36.33 -29.284 1 34.59 ? HO3' GDP 201 A 1 HETATM 34 H H2' GDP . . . C 2 15.383 -38.094 -27.696 1 20.44 ? H2' GDP 201 A 1 HETATM 35 H HO2' GDP . . . C 2 15.432 -35.978 -27.725 1 34.28 ? HO2' GDP 201 A 1 HETATM 36 H H1' GDP . . . C 2 12.897 -37.09 -26.195 1 18.54 ? H1' GDP 201 A 1 HETATM 37 H H8 GDP . . . C 2 15.816 -39.754 -26.129 1 17.24 ? H8 GDP 201 A 1 HETATM 38 H HN1 GDP . . . C 2 14.211 -36.88 -20.501 1 19.56 ? HN1 GDP 201 A 1 HETATM 39 H HN21 GDP . . . C 2 11.792 -35.292 -22.408 1 22.36 ? HN21 GDP 201 A 1 HETATM 40 H HN22 GDP . . . C 2 12.512 -35.527 -20.847 1 22.36 ? HN22 GDP 201 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #