data_8T7N # _model_server_result.job_id 2QmWkImx-AaG5CJ1PZ_2qQ _model_server_result.datetime_utc '2025-07-03 09:26:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t7n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 8T7N # _exptl.entry_id 8T7N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 743.405 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8T7N _cell.length_a 80.872 _cell.length_b 80.872 _cell.length_c 302.452 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T7N _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C21 H28 N7 O17 P3' _chem_comp.formula_weight 743.405 _chem_comp.id NAP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAP doub 237 n n PA O2A NAP sing 238 n n PA O5B NAP sing 239 n n PA O3 NAP sing 240 n n O2A HOA2 NAP sing 241 n n O5B C5B NAP sing 242 n n C5B C4B NAP sing 243 n n C5B H51A NAP sing 244 n n C5B H52A NAP sing 245 n n C4B O4B NAP sing 246 n n C4B C3B NAP sing 247 n n C4B H4B NAP sing 248 n n O4B C1B NAP sing 249 n n C3B O3B NAP sing 250 n n C3B C2B NAP sing 251 n n C3B H3B NAP sing 252 n n O3B HO3A NAP sing 253 n n C2B O2B NAP sing 254 n n C2B C1B NAP sing 255 n n C2B H2B NAP sing 256 n n O2B P2B NAP sing 257 n n C1B N9A NAP sing 258 n n C1B H1B NAP sing 259 n n N9A C8A NAP sing 260 n y N9A C4A NAP sing 261 n y C8A N7A NAP doub 262 n y C8A H8A NAP sing 263 n n N7A C5A NAP sing 264 n y C5A C6A NAP sing 265 n y C5A C4A NAP doub 266 n y C6A N6A NAP sing 267 n n C6A N1A NAP doub 268 n y N6A H61A NAP sing 269 n n N6A H62A NAP sing 270 n n N1A C2A NAP sing 271 n y C2A N3A NAP doub 272 n y C2A H2A NAP sing 273 n n N3A C4A NAP sing 274 n y O3 PN NAP sing 275 n n PN O1N NAP doub 276 n n PN O2N NAP sing 277 n n PN O5D NAP sing 278 n n O5D C5D NAP sing 279 n n C5D C4D NAP sing 280 n n C5D H51N NAP sing 281 n n C5D H52N NAP sing 282 n n C4D O4D NAP sing 283 n n C4D C3D NAP sing 284 n n C4D H4D NAP sing 285 n n O4D C1D NAP sing 286 n n C3D O3D NAP sing 287 n n C3D C2D NAP sing 288 n n C3D H3D NAP sing 289 n n O3D HO3N NAP sing 290 n n C2D O2D NAP sing 291 n n C2D C1D NAP sing 292 n n C2D H2D NAP sing 293 n n O2D HO2N NAP sing 294 n n C1D N1N NAP sing 295 n n C1D H1D NAP sing 296 n n N1N C2N NAP sing 297 n y N1N C6N NAP doub 298 n y C2N C3N NAP doub 299 n y C2N H2N NAP sing 300 n n C3N C7N NAP sing 301 n n C3N C4N NAP sing 302 n y C7N O7N NAP doub 303 n n C7N N7N NAP sing 304 n n N7N H71N NAP sing 305 n n N7N H72N NAP sing 306 n n C4N C5N NAP doub 307 n y C4N H4N NAP sing 308 n n C5N C6N NAP sing 309 n y C5N H5N NAP sing 310 n n C6N H6N NAP sing 311 n n P2B O1X NAP doub 312 n n P2B O2X NAP sing 313 n n P2B O3X NAP sing 314 n n O2X HOP2 NAP sing 315 n n O3X HOP3 NAP sing 316 n n # _atom_sites.entry_id 8T7N _atom_sites.fract_transf_matrix[1][1] 0.012365 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012365 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003306 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 501 500 NAP NDP . D 3 ZT3 A 1 502 2000 ZT3 484 . E 2 NAP B 1 501 500 NAP NDP . F 3 ZT3 B 1 502 2000 ZT3 484 . G 4 HOH A 1 601 49 HOH HOH . G 4 HOH A 2 602 47 HOH HOH . G 4 HOH A 3 603 33 HOH HOH . G 4 HOH A 4 604 51 HOH HOH . G 4 HOH A 5 605 76 HOH HOH . G 4 HOH A 6 606 97 HOH HOH . G 4 HOH A 7 607 35 HOH HOH . G 4 HOH A 8 608 20 HOH HOH . G 4 HOH A 9 609 25 HOH HOH . G 4 HOH A 10 610 61 HOH HOH . G 4 HOH A 11 611 22 HOH HOH . G 4 HOH A 12 612 60 HOH HOH . G 4 HOH A 13 613 48 HOH HOH . G 4 HOH A 14 614 31 HOH HOH . G 4 HOH A 15 615 29 HOH HOH . G 4 HOH A 16 616 32 HOH HOH . G 4 HOH A 17 617 83 HOH HOH . G 4 HOH A 18 618 77 HOH HOH . G 4 HOH A 19 619 17 HOH HOH . G 4 HOH A 20 620 50 HOH HOH . G 4 HOH A 21 621 8 HOH HOH . G 4 HOH A 22 622 68 HOH HOH . G 4 HOH A 23 623 65 HOH HOH . G 4 HOH A 24 624 43 HOH HOH . G 4 HOH A 25 625 46 HOH HOH . G 4 HOH A 26 626 73 HOH HOH . G 4 HOH A 27 627 82 HOH HOH . G 4 HOH A 28 628 87 HOH HOH . G 4 HOH A 29 629 85 HOH HOH . G 4 HOH A 30 630 84 HOH HOH . G 4 HOH A 31 631 57 HOH HOH . G 4 HOH A 32 632 28 HOH HOH . G 4 HOH A 33 633 19 HOH HOH . G 4 HOH A 34 634 53 HOH HOH . G 4 HOH A 35 635 86 HOH HOH . G 4 HOH A 36 636 12 HOH HOH . G 4 HOH A 37 637 16 HOH HOH . G 4 HOH A 38 638 36 HOH HOH . G 4 HOH A 39 639 5 HOH HOH . G 4 HOH A 40 640 59 HOH HOH . G 4 HOH A 41 641 30 HOH HOH . G 4 HOH A 42 642 52 HOH HOH . G 4 HOH A 43 643 81 HOH HOH . G 4 HOH A 44 644 56 HOH HOH . G 4 HOH A 45 645 37 HOH HOH . G 4 HOH A 46 646 92 HOH HOH . G 4 HOH A 47 647 44 HOH HOH . G 4 HOH A 48 648 45 HOH HOH . G 4 HOH A 49 649 91 HOH HOH . G 4 HOH A 50 650 2 HOH HOH . G 4 HOH A 51 651 11 HOH HOH . G 4 HOH A 52 652 94 HOH HOH . G 4 HOH A 53 653 21 HOH HOH . G 4 HOH A 54 654 4 HOH HOH . H 4 HOH B 1 601 39 HOH HOH . H 4 HOH B 2 602 69 HOH HOH . H 4 HOH B 3 603 34 HOH HOH . H 4 HOH B 4 604 14 HOH HOH . H 4 HOH B 5 605 75 HOH HOH . H 4 HOH B 6 606 27 HOH HOH . H 4 HOH B 7 607 40 HOH HOH . H 4 HOH B 8 608 89 HOH HOH . H 4 HOH B 9 609 24 HOH HOH . H 4 HOH B 10 610 9 HOH HOH . H 4 HOH B 11 611 7 HOH HOH . H 4 HOH B 12 612 23 HOH HOH . H 4 HOH B 13 613 1 HOH HOH . H 4 HOH B 14 614 18 HOH HOH . H 4 HOH B 15 615 58 HOH HOH . H 4 HOH B 16 616 26 HOH HOH . H 4 HOH B 17 617 71 HOH HOH . H 4 HOH B 18 618 96 HOH HOH . H 4 HOH B 19 619 41 HOH HOH . H 4 HOH B 20 620 38 HOH HOH . H 4 HOH B 21 621 88 HOH HOH . H 4 HOH B 22 622 6 HOH HOH . H 4 HOH B 23 623 42 HOH HOH . H 4 HOH B 24 624 99 HOH HOH . H 4 HOH B 25 625 78 HOH HOH . H 4 HOH B 26 626 13 HOH HOH . H 4 HOH B 27 627 63 HOH HOH . H 4 HOH B 28 628 62 HOH HOH . H 4 HOH B 29 629 95 HOH HOH . H 4 HOH B 30 630 98 HOH HOH . H 4 HOH B 31 631 67 HOH HOH . H 4 HOH B 32 632 54 HOH HOH . H 4 HOH B 33 633 74 HOH HOH . H 4 HOH B 34 634 66 HOH HOH . H 4 HOH B 35 635 70 HOH HOH . H 4 HOH B 36 636 80 HOH HOH . H 4 HOH B 37 637 3 HOH HOH . H 4 HOH B 38 638 10 HOH HOH . H 4 HOH B 39 639 90 HOH HOH . H 4 HOH B 40 640 64 HOH HOH . H 4 HOH B 41 641 79 HOH HOH . H 4 HOH B 42 642 15 HOH HOH . H 4 HOH B 43 643 55 HOH HOH . H 4 HOH B 44 644 93 HOH HOH . H 4 HOH B 45 645 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAP . . . C 2 28.786 -16.704 -14.792 1 61.02 ? PA NAP 501 A 1 HETATM 2 O O1A NAP . . . C 2 28.726 -15.279 -14.371 1 60.35 ? O1A NAP 501 A 1 HETATM 3 O O2A NAP . . . C 2 28.848 -16.828 -16.272 1 60.79 ? O2A NAP 501 A 1 HETATM 4 O O5B NAP . . . C 2 27.52 -17.624 -14.374 1 60.48 ? O5B NAP 501 A 1 HETATM 5 C C5B NAP . . . C 2 27.258 -18.024 -13.013 1 59.88 ? C5B NAP 501 A 1 HETATM 6 C C4B NAP . . . C 2 25.766 -18.046 -12.801 1 59.53 ? C4B NAP 501 A 1 HETATM 7 O O4B NAP . . . C 2 25.286 -16.695 -12.607 1 59.53 ? O4B NAP 501 A 1 HETATM 8 C C3B NAP . . . C 2 24.957 -18.568 -13.983 1 59.61 ? C3B NAP 501 A 1 HETATM 9 O O3B NAP . . . C 2 25.001 -19.979 -14.126 1 59.73 ? O3B NAP 501 A 1 HETATM 10 C C2B NAP . . . C 2 23.595 -17.982 -13.618 1 60.04 ? C2B NAP 501 A 1 HETATM 11 O O2B NAP . . . C 2 22.975 -18.587 -12.463 1 61.2 ? O2B NAP 501 A 1 HETATM 12 C C1B NAP . . . C 2 24.004 -16.57 -13.203 1 59.36 ? C1B NAP 501 A 1 HETATM 13 N N9A NAP . . . C 2 24.09 -15.627 -14.315 1 58.53 ? N9A NAP 501 A 1 HETATM 14 C C8A NAP . . . C 2 25.209 -14.965 -14.753 1 58.66 ? C8A NAP 501 A 1 HETATM 15 N N7A NAP . . . C 2 24.982 -14.126 -15.735 1 58.63 ? N7A NAP 501 A 1 HETATM 16 C C5A NAP . . . C 2 23.619 -14.251 -15.965 1 58.45 ? C5A NAP 501 A 1 HETATM 17 C C6A NAP . . . C 2 22.744 -13.608 -16.866 1 58.1 ? C6A NAP 501 A 1 HETATM 18 N N6A NAP . . . C 2 23.139 -12.711 -17.774 1 58.16 ? N6A NAP 501 A 1 HETATM 19 N N1A NAP . . . C 2 21.437 -13.946 -16.819 1 57.49 ? N1A NAP 501 A 1 HETATM 20 C C2A NAP . . . C 2 21.045 -14.879 -15.949 1 57.07 ? C2A NAP 501 A 1 HETATM 21 N N3A NAP . . . C 2 21.773 -15.552 -15.056 1 57.27 ? N3A NAP 501 A 1 HETATM 22 C C4A NAP . . . C 2 23.059 -15.181 -15.106 1 58.07 ? C4A NAP 501 A 1 HETATM 23 O O3 NAP . . . C 2 30.108 -17.413 -14.258 1 63.1 ? O3 NAP 501 A 1 HETATM 24 P PN NAP . . . C 2 30.686 -18.89 -14.44 1 64.66 ? PN NAP 501 A 1 HETATM 25 O O1N NAP . . . C 2 31.337 -19.298 -13.171 1 65.03 ? O1N NAP 501 A 1 HETATM 26 O O2N NAP . . . C 2 29.543 -19.864 -14.829 1 64.59 ? O2N NAP 501 A 1 HETATM 27 O O5D NAP . . . C 2 31.728 -18.785 -15.645 1 64.43 ? O5D NAP 501 A 1 HETATM 28 C C5D NAP . . . C 2 31.561 -19.279 -16.986 1 63.86 ? C5D NAP 501 A 1 HETATM 29 C C4D NAP . . . C 2 32.74 -18.787 -17.787 1 63.64 ? C4D NAP 501 A 1 HETATM 30 O O4D NAP . . . C 2 32.768 -17.344 -17.76 1 63.7 ? O4D NAP 501 A 1 HETATM 31 C C3D NAP . . . C 2 34.118 -19.268 -17.322 1 63.43 ? C3D NAP 501 A 1 HETATM 32 O O3D NAP . . . C 2 34.778 -20.026 -18.329 1 63.35 ? O3D NAP 501 A 1 HETATM 33 C C2D NAP . . . C 2 34.857 -17.976 -16.933 1 63.35 ? C2D NAP 501 A 1 HETATM 34 O O2D NAP . . . C 2 36.25 -17.973 -17.23 1 62.95 ? O2D NAP 501 A 1 HETATM 35 C C1D NAP . . . C 2 34.113 -16.919 -17.74 1 63.49 ? C1D NAP 501 A 1 HETATM 36 N N1N NAP . . . C 2 34.159 -15.577 -17.166 1 63.61 ? N1N NAP 501 A 1 HETATM 37 C C2N NAP . . . C 2 34.32 -14.468 -17.975 1 63.84 ? C2N NAP 501 A 1 HETATM 38 C C3N NAP . . . C 2 34.356 -13.208 -17.491 1 64.35 ? C3N NAP 501 A 1 HETATM 39 C C7N NAP . . . C 2 34.434 -12.04 -18.45 1 65.09 ? C7N NAP 501 A 1 HETATM 40 O O7N NAP . . . C 2 35.031 -12.144 -19.543 1 64.76 ? O7N NAP 501 A 1 HETATM 41 N N7N NAP . . . C 2 33.847 -10.905 -18.08 1 65.57 ? N7N NAP 501 A 1 HETATM 42 C C4N NAP . . . C 2 34.264 -12.942 -16.006 1 63.87 ? C4N NAP 501 A 1 HETATM 43 C C5N NAP . . . C 2 34.036 -14.208 -15.24 1 63.66 ? C5N NAP 501 A 1 HETATM 44 C C6N NAP . . . C 2 34 -15.396 -15.81 1 63.55 ? C6N NAP 501 A 1 HETATM 45 P P2B NAP . . . C 2 22.014 -19.893 -12.444 1 62.16 ? P2B NAP 501 A 1 HETATM 46 O O1X NAP . . . C 2 22.882 -21.098 -12.4 1 62.64 ? O1X NAP 501 A 1 HETATM 47 O O2X NAP . . . C 2 21.086 -19.763 -11.221 1 62.6 ? O2X NAP 501 A 1 HETATM 48 O O3X NAP . . . C 2 21.142 -19.81 -13.693 1 62.23 ? O3X NAP 501 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 48 #