data_8T7W # _model_server_result.job_id SZUx6byG3BPSmqDTzgi5Kw _model_server_result.datetime_utc '2024-10-19 17:30:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t7w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 8T7W # _exptl.entry_id 8T7W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8T7W _cell.length_a 52.373 _cell.length_b 114.106 _cell.length_c 117.684 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T7W _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8T7W _atom_sites.fract_transf_matrix[1][1] 0.019094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008764 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008497 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 2 EDO EDO . C 2 EDO A 1 302 3 EDO EDO . D 2 EDO A 1 303 4 EDO EDO . E 2 EDO A 1 304 5 EDO EDO . F 2 EDO A 1 305 6 EDO EDO . G 3 HOH A 1 401 50 HOH HOH . G 3 HOH A 2 402 230 HOH HOH . G 3 HOH A 3 403 186 HOH HOH . G 3 HOH A 4 404 219 HOH HOH . G 3 HOH A 5 405 145 HOH HOH . G 3 HOH A 6 406 225 HOH HOH . G 3 HOH A 7 407 183 HOH HOH . G 3 HOH A 8 408 53 HOH HOH . G 3 HOH A 9 409 19 HOH HOH . G 3 HOH A 10 410 165 HOH HOH . G 3 HOH A 11 411 28 HOH HOH . G 3 HOH A 12 412 70 HOH HOH . G 3 HOH A 13 413 161 HOH HOH . G 3 HOH A 14 414 128 HOH HOH . G 3 HOH A 15 415 190 HOH HOH . G 3 HOH A 16 416 198 HOH HOH . G 3 HOH A 17 417 203 HOH HOH . G 3 HOH A 18 418 197 HOH HOH . G 3 HOH A 19 419 133 HOH HOH . G 3 HOH A 20 420 160 HOH HOH . G 3 HOH A 21 421 180 HOH HOH . G 3 HOH A 22 422 25 HOH HOH . G 3 HOH A 23 423 2 HOH HOH . G 3 HOH A 24 424 132 HOH HOH . G 3 HOH A 25 425 152 HOH HOH . G 3 HOH A 26 426 4 HOH HOH . G 3 HOH A 27 427 34 HOH HOH . G 3 HOH A 28 428 206 HOH HOH . G 3 HOH A 29 429 121 HOH HOH . G 3 HOH A 30 430 149 HOH HOH . G 3 HOH A 31 431 234 HOH HOH . G 3 HOH A 32 432 66 HOH HOH . G 3 HOH A 33 433 81 HOH HOH . G 3 HOH A 34 434 147 HOH HOH . G 3 HOH A 35 435 89 HOH HOH . G 3 HOH A 36 436 48 HOH HOH . G 3 HOH A 37 437 144 HOH HOH . G 3 HOH A 38 438 202 HOH HOH . G 3 HOH A 39 439 123 HOH HOH . G 3 HOH A 40 440 150 HOH HOH . G 3 HOH A 41 441 207 HOH HOH . G 3 HOH A 42 442 56 HOH HOH . G 3 HOH A 43 443 55 HOH HOH . G 3 HOH A 44 444 143 HOH HOH . G 3 HOH A 45 445 176 HOH HOH . G 3 HOH A 46 446 59 HOH HOH . G 3 HOH A 47 447 15 HOH HOH . G 3 HOH A 48 448 134 HOH HOH . G 3 HOH A 49 449 33 HOH HOH . G 3 HOH A 50 450 5 HOH HOH . G 3 HOH A 51 451 120 HOH HOH . G 3 HOH A 52 452 61 HOH HOH . G 3 HOH A 53 453 1 HOH HOH . G 3 HOH A 54 454 96 HOH HOH . G 3 HOH A 55 455 43 HOH HOH . G 3 HOH A 56 456 74 HOH HOH . G 3 HOH A 57 457 84 HOH HOH . G 3 HOH A 58 458 41 HOH HOH . G 3 HOH A 59 459 73 HOH HOH . G 3 HOH A 60 460 52 HOH HOH . G 3 HOH A 61 461 8 HOH HOH . G 3 HOH A 62 462 62 HOH HOH . G 3 HOH A 63 463 102 HOH HOH . G 3 HOH A 64 464 100 HOH HOH . G 3 HOH A 65 465 16 HOH HOH . G 3 HOH A 66 466 108 HOH HOH . G 3 HOH A 67 467 155 HOH HOH . G 3 HOH A 68 468 22 HOH HOH . G 3 HOH A 69 469 98 HOH HOH . G 3 HOH A 70 470 124 HOH HOH . G 3 HOH A 71 471 97 HOH HOH . G 3 HOH A 72 472 40 HOH HOH . G 3 HOH A 73 473 3 HOH HOH . G 3 HOH A 74 474 31 HOH HOH . G 3 HOH A 75 475 24 HOH HOH . G 3 HOH A 76 476 169 HOH HOH . G 3 HOH A 77 477 57 HOH HOH . G 3 HOH A 78 478 58 HOH HOH . G 3 HOH A 79 479 92 HOH HOH . G 3 HOH A 80 480 86 HOH HOH . G 3 HOH A 81 481 63 HOH HOH . G 3 HOH A 82 482 192 HOH HOH . G 3 HOH A 83 483 125 HOH HOH . G 3 HOH A 84 484 14 HOH HOH . G 3 HOH A 85 485 10 HOH HOH . G 3 HOH A 86 486 29 HOH HOH . G 3 HOH A 87 487 94 HOH HOH . G 3 HOH A 88 488 20 HOH HOH . G 3 HOH A 89 489 44 HOH HOH . G 3 HOH A 90 490 228 HOH HOH . G 3 HOH A 91 491 47 HOH HOH . G 3 HOH A 92 492 109 HOH HOH . G 3 HOH A 93 493 42 HOH HOH . G 3 HOH A 94 494 82 HOH HOH . G 3 HOH A 95 495 18 HOH HOH . G 3 HOH A 96 496 35 HOH HOH . G 3 HOH A 97 497 9 HOH HOH . G 3 HOH A 98 498 17 HOH HOH . G 3 HOH A 99 499 114 HOH HOH . G 3 HOH A 100 500 185 HOH HOH . G 3 HOH A 101 501 12 HOH HOH . G 3 HOH A 102 502 64 HOH HOH . G 3 HOH A 103 503 11 HOH HOH . G 3 HOH A 104 504 7 HOH HOH . G 3 HOH A 105 505 13 HOH HOH . G 3 HOH A 106 506 116 HOH HOH . G 3 HOH A 107 507 164 HOH HOH . G 3 HOH A 108 508 220 HOH HOH . G 3 HOH A 109 509 167 HOH HOH . G 3 HOH A 110 510 236 HOH HOH . G 3 HOH A 111 511 103 HOH HOH . G 3 HOH A 112 512 179 HOH HOH . G 3 HOH A 113 513 224 HOH HOH . G 3 HOH A 114 514 131 HOH HOH . G 3 HOH A 115 515 83 HOH HOH . G 3 HOH A 116 516 135 HOH HOH . G 3 HOH A 117 517 75 HOH HOH . G 3 HOH A 118 518 93 HOH HOH . G 3 HOH A 119 519 178 HOH HOH . G 3 HOH A 120 520 46 HOH HOH . G 3 HOH A 121 521 91 HOH HOH . G 3 HOH A 122 522 87 HOH HOH . G 3 HOH A 123 523 67 HOH HOH . G 3 HOH A 124 524 38 HOH HOH . G 3 HOH A 125 525 26 HOH HOH . G 3 HOH A 126 526 126 HOH HOH . G 3 HOH A 127 527 173 HOH HOH . G 3 HOH A 128 528 36 HOH HOH . G 3 HOH A 129 529 76 HOH HOH . G 3 HOH A 130 530 221 HOH HOH . G 3 HOH A 131 531 105 HOH HOH . G 3 HOH A 132 532 27 HOH HOH . G 3 HOH A 133 533 151 HOH HOH . G 3 HOH A 134 534 90 HOH HOH . G 3 HOH A 135 535 78 HOH HOH . G 3 HOH A 136 536 54 HOH HOH . G 3 HOH A 137 537 163 HOH HOH . G 3 HOH A 138 538 21 HOH HOH . G 3 HOH A 139 539 30 HOH HOH . G 3 HOH A 140 540 217 HOH HOH . G 3 HOH A 141 541 140 HOH HOH . G 3 HOH A 142 542 39 HOH HOH . G 3 HOH A 143 543 223 HOH HOH . G 3 HOH A 144 544 184 HOH HOH . G 3 HOH A 145 545 85 HOH HOH . G 3 HOH A 146 546 137 HOH HOH . G 3 HOH A 147 547 72 HOH HOH . G 3 HOH A 148 548 112 HOH HOH . G 3 HOH A 149 549 88 HOH HOH . G 3 HOH A 150 550 71 HOH HOH . G 3 HOH A 151 551 191 HOH HOH . G 3 HOH A 152 552 49 HOH HOH . G 3 HOH A 153 553 216 HOH HOH . G 3 HOH A 154 554 101 HOH HOH . G 3 HOH A 155 555 193 HOH HOH . G 3 HOH A 156 556 142 HOH HOH . G 3 HOH A 157 557 65 HOH HOH . G 3 HOH A 158 558 60 HOH HOH . G 3 HOH A 159 559 141 HOH HOH . G 3 HOH A 160 560 209 HOH HOH . G 3 HOH A 161 561 110 HOH HOH . G 3 HOH A 162 562 51 HOH HOH . G 3 HOH A 163 563 156 HOH HOH . G 3 HOH A 164 564 37 HOH HOH . G 3 HOH A 165 565 159 HOH HOH . G 3 HOH A 166 566 107 HOH HOH . G 3 HOH A 167 567 231 HOH HOH . G 3 HOH A 168 568 23 HOH HOH . G 3 HOH A 169 569 187 HOH HOH . G 3 HOH A 170 570 77 HOH HOH . G 3 HOH A 171 571 68 HOH HOH . G 3 HOH A 172 572 115 HOH HOH . G 3 HOH A 173 573 148 HOH HOH . G 3 HOH A 174 574 170 HOH HOH . G 3 HOH A 175 575 199 HOH HOH . G 3 HOH A 176 576 95 HOH HOH . G 3 HOH A 177 577 117 HOH HOH . G 3 HOH A 178 578 6 HOH HOH . G 3 HOH A 179 579 211 HOH HOH . G 3 HOH A 180 580 138 HOH HOH . G 3 HOH A 181 581 146 HOH HOH . G 3 HOH A 182 582 195 HOH HOH . G 3 HOH A 183 583 122 HOH HOH . G 3 HOH A 184 584 69 HOH HOH . G 3 HOH A 185 585 118 HOH HOH . G 3 HOH A 186 586 158 HOH HOH . G 3 HOH A 187 587 229 HOH HOH . G 3 HOH A 188 588 218 HOH HOH . G 3 HOH A 189 589 104 HOH HOH . G 3 HOH A 190 590 200 HOH HOH . G 3 HOH A 191 591 182 HOH HOH . G 3 HOH A 192 592 139 HOH HOH . G 3 HOH A 193 593 204 HOH HOH . G 3 HOH A 194 594 226 HOH HOH . G 3 HOH A 195 595 205 HOH HOH . G 3 HOH A 196 596 157 HOH HOH . G 3 HOH A 197 597 111 HOH HOH . G 3 HOH A 198 598 175 HOH HOH . G 3 HOH A 199 599 80 HOH HOH . G 3 HOH A 200 600 215 HOH HOH . G 3 HOH A 201 601 210 HOH HOH . G 3 HOH A 202 602 201 HOH HOH . G 3 HOH A 203 603 136 HOH HOH . G 3 HOH A 204 604 45 HOH HOH . G 3 HOH A 205 605 181 HOH HOH . G 3 HOH A 206 606 32 HOH HOH . G 3 HOH A 207 607 166 HOH HOH . G 3 HOH A 208 608 172 HOH HOH . G 3 HOH A 209 609 174 HOH HOH . G 3 HOH A 210 610 153 HOH HOH . G 3 HOH A 211 611 222 HOH HOH . G 3 HOH A 212 612 233 HOH HOH . G 3 HOH A 213 613 189 HOH HOH . G 3 HOH A 214 614 232 HOH HOH . G 3 HOH A 215 615 177 HOH HOH . G 3 HOH A 216 616 99 HOH HOH . G 3 HOH A 217 617 130 HOH HOH . G 3 HOH A 218 618 168 HOH HOH . G 3 HOH A 219 619 162 HOH HOH . G 3 HOH A 220 620 213 HOH HOH . G 3 HOH A 221 621 113 HOH HOH . G 3 HOH A 222 622 214 HOH HOH . G 3 HOH A 223 623 154 HOH HOH . G 3 HOH A 224 624 194 HOH HOH . G 3 HOH A 225 625 235 HOH HOH . G 3 HOH A 226 626 188 HOH HOH . G 3 HOH A 227 627 119 HOH HOH . G 3 HOH A 228 628 208 HOH HOH . G 3 HOH A 229 629 127 HOH HOH . G 3 HOH A 230 630 196 HOH HOH . G 3 HOH A 231 631 79 HOH HOH . G 3 HOH A 232 632 171 HOH HOH . G 3 HOH A 233 633 106 HOH HOH . G 3 HOH A 234 634 212 HOH HOH . G 3 HOH A 235 635 227 HOH HOH . G 3 HOH A 236 636 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 2 14.531 30.807 38.041 1 46.78 ? C1 EDO 304 A 1 HETATM 2 O O1 EDO . . . E 2 14.76 31.733 39.08 1 56.09 ? O1 EDO 304 A 1 HETATM 3 C C2 EDO . . . E 2 15.62 30.882 36.997 1 53 ? C2 EDO 304 A 1 HETATM 4 O O2 EDO . . . E 2 16.884 30.923 37.63 1 53.32 ? O2 EDO 304 A 1 # _model_server_stats.io_time_ms 85 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 4 #