data_8T81 # _model_server_result.job_id mzLlBdVsMJQq4MmqlQGeqA _model_server_result.datetime_utc '2024-11-06 14:29:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t81 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 8T81 # _exptl.entry_id 8T81 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 367.24 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(6M)-3-hydroxy-4-oxo-6-[(4M)-4-(1H-tetrazol-5-yl)-2-(trifluoromethyl)phenyl]-1,4-dihydropyridine-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8T81 _cell.length_a 75.378 _cell.length_b 75.378 _cell.length_c 121.533 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T81 _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall 'P 62 2 (x,y,z+1/3)' _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 47 A HIS 41 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc2 A OE2 GLU 74 A GLU 80 1_555 C MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.786 ? metalc ? metalc3 A OD2 ASP 102 A ASP 108 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? metalc ? metalc4 A OD1 ASP 102 A ASP 108 1_555 C MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? metalc ? metalc5 A OE2 GLU 113 A GLU 119 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc6 A O ILE 114 A ILE 120 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc7 B MN MN . A MN 301 1_555 D O23 IJM . A IJM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc8 B MN MN . A MN 301 1_555 D O25 IJM . A IJM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc9 C MN MN . A MN 302 1_555 D O01 IJM . A IJM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? metalc ? metalc10 C MN MN . A MN 302 1_555 D O23 IJM . A IJM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc11 C MN MN . A MN 302 1_555 E O HOH . A HOH 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc12 C MN MN . A MN 302 1_555 E O HOH . A HOH 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? # _chem_comp.formula 'C14 H8 F3 N5 O4' _chem_comp.formula_weight 367.24 _chem_comp.id IJM _chem_comp.mon_nstd_flag . _chem_comp.name '(6M)-3-hydroxy-4-oxo-6-[(4M)-4-(1H-tetrazol-5-yl)-2-(trifluoromethyl)phenyl]-1,4-dihydropyridine-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N13 N14 IJM sing 152 n y N13 N12 IJM doub 153 n y N14 C10 IJM sing 154 n y N12 N11 IJM sing 155 n y C10 N11 IJM doub 156 n y C10 C09 IJM sing 157 n n C08 C09 IJM doub 158 n y C08 C07 IJM sing 159 n y C09 C15 IJM sing 160 n y C07 C06 IJM doub 161 n y C15 C16 IJM doub 162 n y O26 C02 IJM doub 163 n n C06 C16 IJM sing 164 n y C06 C05 IJM sing 165 n n C16 C17 IJM sing 166 n n N04 C05 IJM sing 167 n n N04 C03 IJM sing 168 n n F19 C17 IJM sing 169 n n C05 C21 IJM doub 170 n n C02 C03 IJM sing 171 n n C02 O01 IJM sing 172 n n F18 C17 IJM sing 173 n n C17 F20 IJM sing 174 n n C03 C22 IJM doub 175 n n C21 C24 IJM sing 176 n n C22 C24 IJM sing 177 n n C22 O23 IJM sing 178 n n C24 O25 IJM doub 179 n n C07 H071 IJM sing 180 n n C08 H081 IJM sing 181 n n C15 H151 IJM sing 182 n n C21 H211 IJM sing 183 n n N04 H041 IJM sing 184 n n N14 H141 IJM sing 185 n n O01 H1 IJM sing 186 n n O23 H2 IJM sing 187 n n # _atom_sites.entry_id 8T81 _atom_sites.fract_transf_matrix[1][1] 0.013266 _atom_sites.fract_transf_matrix[1][2] 0.007659 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015319 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008228 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 301 301 MN MN . C 2 MN A 1 302 302 MN MN . D 3 IJM A 1 303 303 IJM LIG . E 4 HOH A 1 401 24 HOH HOH . E 4 HOH A 2 402 40 HOH HOH . E 4 HOH A 3 403 19 HOH HOH . E 4 HOH A 4 404 18 HOH HOH . E 4 HOH A 5 405 25 HOH HOH . E 4 HOH A 6 406 35 HOH HOH . E 4 HOH A 7 407 20 HOH HOH . E 4 HOH A 8 408 36 HOH HOH . E 4 HOH A 9 409 32 HOH HOH . E 4 HOH A 10 410 41 HOH HOH . E 4 HOH A 11 411 31 HOH HOH . E 4 HOH A 12 412 14 HOH HOH . E 4 HOH A 13 413 42 HOH HOH . E 4 HOH A 14 414 29 HOH HOH . E 4 HOH A 15 415 5 HOH HOH . E 4 HOH A 16 416 46 HOH HOH . E 4 HOH A 17 417 43 HOH HOH . E 4 HOH A 18 418 37 HOH HOH . E 4 HOH A 19 419 49 HOH HOH . E 4 HOH A 20 420 26 HOH HOH . E 4 HOH A 21 421 11 HOH HOH . E 4 HOH A 22 422 2 HOH HOH . E 4 HOH A 23 423 4 HOH HOH . E 4 HOH A 24 424 9 HOH HOH . E 4 HOH A 25 425 10 HOH HOH . E 4 HOH A 26 426 21 HOH HOH . E 4 HOH A 27 427 12 HOH HOH . E 4 HOH A 28 428 7 HOH HOH . E 4 HOH A 29 429 30 HOH HOH . E 4 HOH A 30 430 17 HOH HOH . E 4 HOH A 31 431 16 HOH HOH . E 4 HOH A 32 432 47 HOH HOH . E 4 HOH A 33 433 34 HOH HOH . E 4 HOH A 34 434 13 HOH HOH . E 4 HOH A 35 435 28 HOH HOH . E 4 HOH A 36 436 33 HOH HOH . E 4 HOH A 37 437 48 HOH HOH . E 4 HOH A 38 438 15 HOH HOH . E 4 HOH A 39 439 6 HOH HOH . E 4 HOH A 40 440 38 HOH HOH . E 4 HOH A 41 441 23 HOH HOH . E 4 HOH A 42 442 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 IJM . . . D 3 18.461 16.128 -15.692 1 70.1 ? C02 IJM 303 A 1 HETATM 2 C C03 IJM . . . D 3 19.762 16.799 -15.253 1 62.97 ? C03 IJM 303 A 1 HETATM 3 C C05 IJM . . . D 3 22.094 17.775 -15.771 1 73.41 ? C05 IJM 303 A 1 HETATM 4 C C06 IJM . . . D 3 23.25 18.137 -16.703 1 70.95 ? C06 IJM 303 A 1 HETATM 5 C C07 IJM . . . D 3 23.093 19.19 -17.589 1 75.44 ? C07 IJM 303 A 1 HETATM 6 C C08 IJM . . . D 3 24.13 19.552 -18.432 1 75.63 ? C08 IJM 303 A 1 HETATM 7 C C09 IJM . . . D 3 25.328 18.861 -18.383 1 74.88 ? C09 IJM 303 A 1 HETATM 8 C C10 IJM . . . D 3 26.481 19.255 -19.299 1 80.1 ? C10 IJM 303 A 1 HETATM 9 C C15 IJM . . . D 3 25.495 17.818 -17.487 1 76.24 ? C15 IJM 303 A 1 HETATM 10 C C16 IJM . . . D 3 24.463 17.451 -16.642 1 69.76 ? C16 IJM 303 A 1 HETATM 11 C C17 IJM . . . D 3 24.703 16.286 -15.673 1 76.13 ? C17 IJM 303 A 1 HETATM 12 C C21 IJM . . . D 3 22.27 18.124 -14.297 1 70.36 ? C21 IJM 303 A 1 HETATM 13 C C22 IJM . . . D 3 19.95 17.152 -13.778 1 67.08 ? C22 IJM 303 A 1 HETATM 14 C C24 IJM . . . D 3 21.202 17.808 -13.32 1 62.97 ? C24 IJM 303 A 1 HETATM 15 F F18 IJM . . . D 3 24.824 16.763 -14.4 1 75.01 ? F18 IJM 303 A 1 HETATM 16 F F19 IJM . . . D 3 23.687 15.377 -15.738 1 86.4 ? F19 IJM 303 A 1 HETATM 17 F F20 IJM . . . D 3 25.869 15.658 -16.004 1 70.26 ? F20 IJM 303 A 1 HETATM 18 N N04 IJM . . . D 3 20.837 17.115 -16.242 1 74.8 ? N04 IJM 303 A 1 HETATM 19 N N11 IJM . . . D 3 26.423 19.548 -20.628 1 77.54 ? N11 IJM 303 A 1 HETATM 20 N N12 IJM . . . D 3 27.673 19.844 -21.035 1 90.71 ? N12 IJM 303 A 1 HETATM 21 N N13 IJM . . . D 3 28.492 19.744 -20.013 1 93.53 ? N13 IJM 303 A 1 HETATM 22 N N14 IJM . . . D 3 27.785 19.382 -18.928 1 70.85 ? N14 IJM 303 A 1 HETATM 23 O O01 IJM . . . D 3 17.494 16.054 -14.887 1 66.83 -1 O01 IJM 303 A 1 HETATM 24 O O23 IJM . . . D 3 18.945 16.859 -12.848 1 69.88 ? O23 IJM 303 A 1 HETATM 25 O O25 IJM . . . D 3 21.354 18.083 -12.179 1 64.11 ? O25 IJM 303 A 1 HETATM 26 O O26 IJM . . . D 3 18.346 15.659 -16.853 1 72.37 ? O26 IJM 303 A 1 HETATM 27 H H071 IJM . . . D 3 22.156 19.733 -17.622 1 90.92 ? H071 IJM 303 A 1 HETATM 28 H H081 IJM . . . D 3 24.004 20.373 -19.128 1 91.15 ? H081 IJM 303 A 1 HETATM 29 H H151 IJM . . . D 3 26.439 17.287 -17.449 1 91.88 ? H151 IJM 303 A 1 HETATM 30 H H211 IJM . . . D 3 23.181 18.606 -13.963 1 84.82 ? H211 IJM 303 A 1 HETATM 31 H H041 IJM . . . D 3 20.718 16.888 -17.208 1 90.15 ? H041 IJM 303 A 1 HETATM 32 H H141 IJM . . . D 3 28.152 19.231 -18.009 1 85.41 ? H141 IJM 303 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #