data_8T85 # _model_server_result.job_id 28TGVN1LcZYvujcWuWGQVw _model_server_result.datetime_utc '2025-03-13 18:06:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t85 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 8T85 # _exptl.entry_id 8T85 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8T85 _cell.length_a 41.366 _cell.length_b 119.035 _cell.length_c 135.973 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T85 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 15 A ASP 15 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc2 A OD2 ASP 58 A ASP 58 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc3 A OD1 ASP 58 A ASP 58 1_555 F BE BEF . A BEF 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? metalc ? metalc4 A O ALA 60 A ALA 60 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc5 E MG MG . A MG 404 1_555 G O HOH . A HOH 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc6 E MG MG . A MG 404 1_555 G O HOH . A HOH 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 240 n n C1 C2 PEG sing 241 n n C1 H11 PEG sing 242 n n C1 H12 PEG sing 243 n n O1 HO1 PEG sing 244 n n C2 O2 PEG sing 245 n n C2 H21 PEG sing 246 n n C2 H22 PEG sing 247 n n O2 C3 PEG sing 248 n n C3 C4 PEG sing 249 n n C3 H31 PEG sing 250 n n C3 H32 PEG sing 251 n n C4 O4 PEG sing 252 n n C4 H41 PEG sing 253 n n C4 H42 PEG sing 254 n n O4 HO4 PEG sing 255 n n # _atom_sites.entry_id 8T85 _atom_sites.fract_transf_matrix[1][1] 0.024174 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008401 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007354 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PEG A 1 401 1 PEG PEG . C 2 PEG A 1 402 2 PEG PEG . D 2 PEG A 1 403 3 PEG PEG . E 3 MG A 1 404 1 MG MG . F 4 BEF A 1 405 2 BEF BEF . G 5 HOH A 1 501 42 HOH HOH . G 5 HOH A 2 502 13 HOH HOH . G 5 HOH A 3 503 8 HOH HOH . G 5 HOH A 4 504 27 HOH HOH . G 5 HOH A 5 505 5 HOH HOH . G 5 HOH A 6 506 4 HOH HOH . G 5 HOH A 7 507 19 HOH HOH . G 5 HOH A 8 508 37 HOH HOH . G 5 HOH A 9 509 14 HOH HOH . G 5 HOH A 10 510 30 HOH HOH . G 5 HOH A 11 511 7 HOH HOH . G 5 HOH A 12 512 3 HOH HOH . G 5 HOH A 13 513 23 HOH HOH . G 5 HOH A 14 514 26 HOH HOH . G 5 HOH A 15 515 17 HOH HOH . G 5 HOH A 16 516 11 HOH HOH . G 5 HOH A 17 517 21 HOH HOH . G 5 HOH A 18 518 31 HOH HOH . G 5 HOH A 19 519 12 HOH HOH . G 5 HOH A 20 520 24 HOH HOH . G 5 HOH A 21 521 15 HOH HOH . G 5 HOH A 22 522 9 HOH HOH . G 5 HOH A 23 523 16 HOH HOH . G 5 HOH A 24 524 29 HOH HOH . G 5 HOH A 25 525 1 HOH HOH . G 5 HOH A 26 526 36 HOH HOH . G 5 HOH A 27 527 20 HOH HOH . G 5 HOH A 28 528 2 HOH HOH . G 5 HOH A 29 529 6 HOH HOH . G 5 HOH A 30 530 10 HOH HOH . G 5 HOH A 31 531 35 HOH HOH . G 5 HOH A 32 532 22 HOH HOH . G 5 HOH A 33 533 33 HOH HOH . G 5 HOH A 34 534 18 HOH HOH . G 5 HOH A 35 535 49 HOH HOH . G 5 HOH A 36 536 45 HOH HOH . G 5 HOH A 37 537 44 HOH HOH . G 5 HOH A 38 538 25 HOH HOH . G 5 HOH A 39 539 39 HOH HOH . G 5 HOH A 40 540 41 HOH HOH . G 5 HOH A 41 541 34 HOH HOH . G 5 HOH A 42 542 32 HOH HOH . G 5 HOH A 43 543 50 HOH HOH . G 5 HOH A 44 544 28 HOH HOH . G 5 HOH A 45 545 48 HOH HOH . G 5 HOH A 46 546 40 HOH HOH . G 5 HOH A 47 547 38 HOH HOH . G 5 HOH A 48 548 46 HOH HOH . G 5 HOH A 49 549 43 HOH HOH . G 5 HOH A 50 550 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 2 -42.047 -23.154 3.536 1 59.57 ? C1 PEG 403 A 1 HETATM 2 O O1 PEG . . . D 2 -42.548 -22.36 4.596 1 66.74 ? O1 PEG 403 A 1 HETATM 3 C C2 PEG . . . D 2 -41.749 -24.558 3.991 1 65.22 ? C2 PEG 403 A 1 HETATM 4 O O2 PEG . . . D 2 -40.725 -24.54 4.978 1 59.46 ? O2 PEG 403 A 1 HETATM 5 C C3 PEG . . . D 2 -40.286 -25.842 5.337 1 66.73 ? C3 PEG 403 A 1 HETATM 6 C C4 PEG . . . D 2 -39.227 -25.746 6.396 1 69.27 ? C4 PEG 403 A 1 HETATM 7 O O4 PEG . . . D 2 -38.814 -27.04 6.825 1 63.46 ? O4 PEG 403 A 1 HETATM 8 H H11 PEG . . . D 2 -42.708 -23.186 2.827 1 71.57 ? H11 PEG 403 A 1 HETATM 9 H H12 PEG . . . D 2 -41.231 -22.752 3.199 1 71.57 ? H12 PEG 403 A 1 HETATM 10 H HO1 PEG . . . D 2 -42.378 -21.533 4.518 1 80.18 ? HO1 PEG 403 A 1 HETATM 11 H H21 PEG . . . D 2 -42.552 -24.952 4.367 1 78.35 ? H21 PEG 403 A 1 HETATM 12 H H22 PEG . . . D 2 -41.455 -25.087 3.232 1 78.35 ? H22 PEG 403 A 1 HETATM 13 H H31 PEG . . . D 2 -41.037 -26.353 5.677 1 80.16 ? H31 PEG 403 A 1 HETATM 14 H H32 PEG . . . D 2 -39.92 -26.285 4.555 1 80.16 ? H32 PEG 403 A 1 HETATM 15 H H41 PEG . . . D 2 -38.462 -25.27 6.038 1 83.22 ? H41 PEG 403 A 1 HETATM 16 H H42 PEG . . . D 2 -39.583 -25.259 7.156 1 83.22 ? H42 PEG 403 A 1 HETATM 17 H HO4 PEG . . . D 2 -39.167 -27.671 6.38 1 76.24 ? HO4 PEG 403 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #