data_8T8W # _model_server_result.job_id 614rxaXjDYViahlNWyyeOw _model_server_result.datetime_utc '2024-10-28 14:27:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t8w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 8T8W # _exptl.entry_id 8T8W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8T8W _cell.length_a 63.084 _cell.length_b 104.244 _cell.length_c 102.402 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T8W _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 203 A ASP 219 1_555 E CD CD . A CD 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc2 A OD2 ASP 215 A ASP 231 1_555 C CD CD . A CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc3 A OD1 ASP 215 A ASP 231 1_555 D CD CD . A CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc4 A OD2 ASP 215 A ASP 231 1_555 D CD CD . A CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc5 A OG SER 217 A SER 233 1_555 D CD CD . A CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc6 B O1B ATP . A ATP 401 1_555 C CD CD . A CD 402 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc7 B O2A ATP . A ATP 401 1_555 C CD CD . A CD 402 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc8 B O2A ATP . A ATP 401 1_555 C CD CD . A CD 402 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc9 B O1G ATP . A ATP 401 1_555 D CD CD . A CD 403 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc10 B O3G ATP . A ATP 401 1_555 D CD CD . A CD 403 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc11 B O2B ATP . A ATP 401 1_555 D CD CD . A CD 403 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc12 C CD CD . A CD 402 1_555 H O HOH . A HOH 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc13 C CD CD . A CD 402 1_555 H O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc14 D CD CD . A CD 403 1_555 H O HOH . A HOH 658 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8T8W _atom_sites.fract_transf_matrix[1][1] 0.015852 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009593 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009765 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ATP A 1 401 401 ATP ATP . C 3 CD A 1 402 501 CD CD . D 3 CD A 1 403 502 CD CD . E 3 CD A 1 404 503 CD CD . F 4 PO4 A 1 405 701 PO4 PO4 . G 4 PO4 A 1 406 702 PO4 PO4 . H 5 HOH A 1 501 149 HOH HOH . H 5 HOH A 2 502 172 HOH HOH . H 5 HOH A 3 503 147 HOH HOH . H 5 HOH A 4 504 156 HOH HOH . H 5 HOH A 5 505 145 HOH HOH . H 5 HOH A 6 506 151 HOH HOH . H 5 HOH A 7 507 157 HOH HOH . H 5 HOH A 8 508 171 HOH HOH . H 5 HOH A 9 509 150 HOH HOH . H 5 HOH A 10 510 155 HOH HOH . H 5 HOH A 11 511 17 HOH HOH . H 5 HOH A 12 512 127 HOH HOH . H 5 HOH A 13 513 105 HOH HOH . H 5 HOH A 14 514 182 HOH HOH . H 5 HOH A 15 515 26 HOH HOH . H 5 HOH A 16 516 113 HOH HOH . H 5 HOH A 17 517 41 HOH HOH . H 5 HOH A 18 518 73 HOH HOH . H 5 HOH A 19 519 23 HOH HOH . H 5 HOH A 20 520 76 HOH HOH . H 5 HOH A 21 521 71 HOH HOH . H 5 HOH A 22 522 62 HOH HOH . H 5 HOH A 23 523 19 HOH HOH . H 5 HOH A 24 524 162 HOH HOH . H 5 HOH A 25 525 111 HOH HOH . H 5 HOH A 26 526 106 HOH HOH . H 5 HOH A 27 527 84 HOH HOH . H 5 HOH A 28 528 22 HOH HOH . H 5 HOH A 29 529 183 HOH HOH . H 5 HOH A 30 530 29 HOH HOH . H 5 HOH A 31 531 101 HOH HOH . H 5 HOH A 32 532 9 HOH HOH . H 5 HOH A 33 533 107 HOH HOH . H 5 HOH A 34 534 91 HOH HOH . H 5 HOH A 35 535 164 HOH HOH . H 5 HOH A 36 536 109 HOH HOH . H 5 HOH A 37 537 10 HOH HOH . H 5 HOH A 38 538 93 HOH HOH . H 5 HOH A 39 539 88 HOH HOH . H 5 HOH A 40 540 20 HOH HOH . H 5 HOH A 41 541 63 HOH HOH . H 5 HOH A 42 542 139 HOH HOH . H 5 HOH A 43 543 35 HOH HOH . H 5 HOH A 44 544 108 HOH HOH . H 5 HOH A 45 545 2 HOH HOH . H 5 HOH A 46 546 13 HOH HOH . H 5 HOH A 47 547 153 HOH HOH . H 5 HOH A 48 548 28 HOH HOH . H 5 HOH A 49 549 148 HOH HOH . H 5 HOH A 50 550 98 HOH HOH . H 5 HOH A 51 551 57 HOH HOH . H 5 HOH A 52 552 47 HOH HOH . H 5 HOH A 53 553 1 HOH HOH . H 5 HOH A 54 554 43 HOH HOH . H 5 HOH A 55 555 56 HOH HOH . H 5 HOH A 56 556 53 HOH HOH . H 5 HOH A 57 557 64 HOH HOH . H 5 HOH A 58 558 90 HOH HOH . H 5 HOH A 59 559 52 HOH HOH . H 5 HOH A 60 560 86 HOH HOH . H 5 HOH A 61 561 83 HOH HOH . H 5 HOH A 62 562 167 HOH HOH . H 5 HOH A 63 563 50 HOH HOH . H 5 HOH A 64 564 82 HOH HOH . H 5 HOH A 65 565 46 HOH HOH . H 5 HOH A 66 566 154 HOH HOH . H 5 HOH A 67 567 39 HOH HOH . H 5 HOH A 68 568 104 HOH HOH . H 5 HOH A 69 569 32 HOH HOH . H 5 HOH A 70 570 124 HOH HOH . H 5 HOH A 71 571 3 HOH HOH . H 5 HOH A 72 572 67 HOH HOH . H 5 HOH A 73 573 96 HOH HOH . H 5 HOH A 74 574 103 HOH HOH . H 5 HOH A 75 575 7 HOH HOH . H 5 HOH A 76 576 69 HOH HOH . H 5 HOH A 77 577 15 HOH HOH . H 5 HOH A 78 578 135 HOH HOH . H 5 HOH A 79 579 37 HOH HOH . H 5 HOH A 80 580 185 HOH HOH . H 5 HOH A 81 581 110 HOH HOH . H 5 HOH A 82 582 31 HOH HOH . H 5 HOH A 83 583 8 HOH HOH . H 5 HOH A 84 584 80 HOH HOH . H 5 HOH A 85 585 61 HOH HOH . H 5 HOH A 86 586 45 HOH HOH . H 5 HOH A 87 587 27 HOH HOH . H 5 HOH A 88 588 120 HOH HOH . H 5 HOH A 89 589 12 HOH HOH . H 5 HOH A 90 590 121 HOH HOH . H 5 HOH A 91 591 102 HOH HOH . H 5 HOH A 92 592 117 HOH HOH . H 5 HOH A 93 593 87 HOH HOH . H 5 HOH A 94 594 14 HOH HOH . H 5 HOH A 95 595 66 HOH HOH . H 5 HOH A 96 596 58 HOH HOH . H 5 HOH A 97 597 141 HOH HOH . H 5 HOH A 98 598 72 HOH HOH . H 5 HOH A 99 599 34 HOH HOH . H 5 HOH A 100 600 118 HOH HOH . H 5 HOH A 101 601 40 HOH HOH . H 5 HOH A 102 602 116 HOH HOH . H 5 HOH A 103 603 21 HOH HOH . H 5 HOH A 104 604 112 HOH HOH . H 5 HOH A 105 605 74 HOH HOH . H 5 HOH A 106 606 30 HOH HOH . H 5 HOH A 107 607 6 HOH HOH . H 5 HOH A 108 608 24 HOH HOH . H 5 HOH A 109 609 70 HOH HOH . H 5 HOH A 110 610 144 HOH HOH . H 5 HOH A 111 611 114 HOH HOH . H 5 HOH A 112 612 4 HOH HOH . H 5 HOH A 113 613 49 HOH HOH . H 5 HOH A 114 614 75 HOH HOH . H 5 HOH A 115 615 115 HOH HOH . H 5 HOH A 116 616 65 HOH HOH . H 5 HOH A 117 617 48 HOH HOH . H 5 HOH A 118 618 36 HOH HOH . H 5 HOH A 119 619 126 HOH HOH . H 5 HOH A 120 620 146 HOH HOH . H 5 HOH A 121 621 173 HOH HOH . H 5 HOH A 122 622 79 HOH HOH . H 5 HOH A 123 623 11 HOH HOH . H 5 HOH A 124 624 131 HOH HOH . H 5 HOH A 125 625 38 HOH HOH . H 5 HOH A 126 626 92 HOH HOH . H 5 HOH A 127 627 168 HOH HOH . H 5 HOH A 128 628 128 HOH HOH . H 5 HOH A 129 629 60 HOH HOH . H 5 HOH A 130 630 184 HOH HOH . H 5 HOH A 131 631 68 HOH HOH . H 5 HOH A 132 632 160 HOH HOH . H 5 HOH A 133 633 5 HOH HOH . H 5 HOH A 134 634 89 HOH HOH . H 5 HOH A 135 635 59 HOH HOH . H 5 HOH A 136 636 95 HOH HOH . H 5 HOH A 137 637 81 HOH HOH . H 5 HOH A 138 638 99 HOH HOH . H 5 HOH A 139 639 55 HOH HOH . H 5 HOH A 140 640 51 HOH HOH . H 5 HOH A 141 641 130 HOH HOH . H 5 HOH A 142 642 142 HOH HOH . H 5 HOH A 143 643 18 HOH HOH . H 5 HOH A 144 644 100 HOH HOH . H 5 HOH A 145 645 42 HOH HOH . H 5 HOH A 146 646 44 HOH HOH . H 5 HOH A 147 647 165 HOH HOH . H 5 HOH A 148 648 78 HOH HOH . H 5 HOH A 149 649 180 HOH HOH . H 5 HOH A 150 650 25 HOH HOH . H 5 HOH A 151 651 77 HOH HOH . H 5 HOH A 152 652 140 HOH HOH . H 5 HOH A 153 653 123 HOH HOH . H 5 HOH A 154 654 85 HOH HOH . H 5 HOH A 155 655 138 HOH HOH . H 5 HOH A 156 656 158 HOH HOH . H 5 HOH A 157 657 33 HOH HOH . H 5 HOH A 158 658 143 HOH HOH . H 5 HOH A 159 659 169 HOH HOH . H 5 HOH A 160 660 129 HOH HOH . H 5 HOH A 161 661 159 HOH HOH . H 5 HOH A 162 662 136 HOH HOH . H 5 HOH A 163 663 170 HOH HOH . H 5 HOH A 164 664 166 HOH HOH . H 5 HOH A 165 665 94 HOH HOH . H 5 HOH A 166 666 152 HOH HOH . H 5 HOH A 167 667 133 HOH HOH . H 5 HOH A 168 668 132 HOH HOH . H 5 HOH A 169 669 178 HOH HOH . H 5 HOH A 170 670 161 HOH HOH . H 5 HOH A 171 671 177 HOH HOH . H 5 HOH A 172 672 16 HOH HOH . H 5 HOH A 173 673 119 HOH HOH . H 5 HOH A 174 674 176 HOH HOH . H 5 HOH A 175 675 137 HOH HOH . H 5 HOH A 176 676 125 HOH HOH . H 5 HOH A 177 677 122 HOH HOH . H 5 HOH A 178 678 175 HOH HOH . H 5 HOH A 179 679 174 HOH HOH . H 5 HOH A 180 680 54 HOH HOH . H 5 HOH A 181 681 163 HOH HOH . H 5 HOH A 182 682 181 HOH HOH . H 5 HOH A 183 683 179 HOH HOH . H 5 HOH A 184 684 97 HOH HOH . H 5 HOH A 185 685 134 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -20.232 _atom_site.Cartn_y -20.734 _atom_site.Cartn_z -3.699 _atom_site.occupancy 0.6 _atom_site.B_iso_or_equiv 25.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #