data_8T92 # _model_server_result.job_id gaxCkXN9wAsmwXTJgx_ZIg _model_server_result.datetime_utc '2024-11-05 00:31:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t92 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 8T92 # _exptl.entry_id 8T92 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8T92 _cell.length_a 62.532 _cell.length_b 104.128 _cell.length_c 103.862 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T92 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 215 A ASP 231 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc2 A OD1 ASP 215 A ASP 231 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc3 A OD2 ASP 215 A ASP 231 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc4 A OG SER 217 A SER 233 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.85 ? metalc ? metalc5 B O1B ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc6 B O1A ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc7 B O3B ADP . A ADP 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc8 C MG MG . A MG 402 1_555 G O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc9 C MG MG . A MG 402 1_555 G O HOH . A HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc10 C MG MG . A MG 402 1_555 G O HOH . A HOH 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc11 D MG MG . A MG 403 1_555 G O HOH . A HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc12 D MG MG . A MG 403 1_555 G O HOH . A HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? metalc ? metalc13 D MG MG . A MG 403 1_555 G O HOH . A HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8T92 _atom_sites.fract_transf_matrix[1][1] 0.015992 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009628 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 401 401 ADP ADP . C 3 MG A 1 402 501 MG MG . D 3 MG A 1 403 502 MG MG . E 4 XID A 1 404 601 XID SD4 . F 5 PO4 A 1 405 701 PO4 PO4 . G 6 HOH A 1 501 80 HOH HOH . G 6 HOH A 2 502 88 HOH HOH . G 6 HOH A 3 503 16 HOH HOH . G 6 HOH A 4 504 27 HOH HOH . G 6 HOH A 5 505 95 HOH HOH . G 6 HOH A 6 506 2 HOH HOH . G 6 HOH A 7 507 98 HOH HOH . G 6 HOH A 8 508 52 HOH HOH . G 6 HOH A 9 509 65 HOH HOH . G 6 HOH A 10 510 57 HOH HOH . G 6 HOH A 11 511 34 HOH HOH . G 6 HOH A 12 512 44 HOH HOH . G 6 HOH A 13 513 31 HOH HOH . G 6 HOH A 14 514 68 HOH HOH . G 6 HOH A 15 515 23 HOH HOH . G 6 HOH A 16 516 32 HOH HOH . G 6 HOH A 17 517 70 HOH HOH . G 6 HOH A 18 518 9 HOH HOH . G 6 HOH A 19 519 58 HOH HOH . G 6 HOH A 20 520 22 HOH HOH . G 6 HOH A 21 521 30 HOH HOH . G 6 HOH A 22 522 53 HOH HOH . G 6 HOH A 23 523 36 HOH HOH . G 6 HOH A 24 524 74 HOH HOH . G 6 HOH A 25 525 67 HOH HOH . G 6 HOH A 26 526 38 HOH HOH . G 6 HOH A 27 527 4 HOH HOH . G 6 HOH A 28 528 45 HOH HOH . G 6 HOH A 29 529 26 HOH HOH . G 6 HOH A 30 530 51 HOH HOH . G 6 HOH A 31 531 73 HOH HOH . G 6 HOH A 32 532 19 HOH HOH . G 6 HOH A 33 533 91 HOH HOH . G 6 HOH A 34 534 1 HOH HOH . G 6 HOH A 35 535 43 HOH HOH . G 6 HOH A 36 536 10 HOH HOH . G 6 HOH A 37 537 79 HOH HOH . G 6 HOH A 38 538 87 HOH HOH . G 6 HOH A 39 539 37 HOH HOH . G 6 HOH A 40 540 63 HOH HOH . G 6 HOH A 41 541 8 HOH HOH . G 6 HOH A 42 542 85 HOH HOH . G 6 HOH A 43 543 50 HOH HOH . G 6 HOH A 44 544 92 HOH HOH . G 6 HOH A 45 545 25 HOH HOH . G 6 HOH A 46 546 35 HOH HOH . G 6 HOH A 47 547 14 HOH HOH . G 6 HOH A 48 548 13 HOH HOH . G 6 HOH A 49 549 55 HOH HOH . G 6 HOH A 50 550 60 HOH HOH . G 6 HOH A 51 551 49 HOH HOH . G 6 HOH A 52 552 5 HOH HOH . G 6 HOH A 53 553 56 HOH HOH . G 6 HOH A 54 554 28 HOH HOH . G 6 HOH A 55 555 76 HOH HOH . G 6 HOH A 56 556 11 HOH HOH . G 6 HOH A 57 557 72 HOH HOH . G 6 HOH A 58 558 61 HOH HOH . G 6 HOH A 59 559 69 HOH HOH . G 6 HOH A 60 560 17 HOH HOH . G 6 HOH A 61 561 18 HOH HOH . G 6 HOH A 62 562 39 HOH HOH . G 6 HOH A 63 563 64 HOH HOH . G 6 HOH A 64 564 15 HOH HOH . G 6 HOH A 65 565 47 HOH HOH . G 6 HOH A 66 566 7 HOH HOH . G 6 HOH A 67 567 66 HOH HOH . G 6 HOH A 68 568 24 HOH HOH . G 6 HOH A 69 569 29 HOH HOH . G 6 HOH A 70 570 12 HOH HOH . G 6 HOH A 71 571 54 HOH HOH . G 6 HOH A 72 572 78 HOH HOH . G 6 HOH A 73 573 97 HOH HOH . G 6 HOH A 74 574 33 HOH HOH . G 6 HOH A 75 575 3 HOH HOH . G 6 HOH A 76 576 42 HOH HOH . G 6 HOH A 77 577 62 HOH HOH . G 6 HOH A 78 578 46 HOH HOH . G 6 HOH A 79 579 71 HOH HOH . G 6 HOH A 80 580 83 HOH HOH . G 6 HOH A 81 581 6 HOH HOH . G 6 HOH A 82 582 81 HOH HOH . G 6 HOH A 83 583 86 HOH HOH . G 6 HOH A 84 584 96 HOH HOH . G 6 HOH A 85 585 77 HOH HOH . G 6 HOH A 86 586 41 HOH HOH . G 6 HOH A 87 587 20 HOH HOH . G 6 HOH A 88 588 84 HOH HOH . G 6 HOH A 89 589 21 HOH HOH . G 6 HOH A 90 590 40 HOH HOH . G 6 HOH A 91 591 93 HOH HOH . G 6 HOH A 92 592 48 HOH HOH . G 6 HOH A 93 593 75 HOH HOH . G 6 HOH A 94 594 82 HOH HOH . G 6 HOH A 95 595 94 HOH HOH . G 6 HOH A 96 596 59 HOH HOH . G 6 HOH A 97 597 90 HOH HOH . G 6 HOH A 98 598 89 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -16.332 _atom_site.Cartn_y -18.902 _atom_site.Cartn_z -3.064 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.62 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #