data_8TBV
#
_model_server_result.job_id            WUCuYxNVNjAqUQn00QQ3VQ 
_model_server_result.datetime_utc      '2025-01-19 03:20:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8tbv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":302}' 
#
_entry.id    8TBV 
#
_exptl.entry_id    8TBV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.07 
_cell.angle_gamma         90 
_cell.entry_id            8TBV 
_cell.length_a            62.226 
_cell.length_b            86.726 
_cell.length_c            79.268 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8TBV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,G,H,I,J,K,L 1 1 
D,E,F,M,N,O 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 B SG CYS 26 B CYS 26 1_555 B SG CYS 81 B CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 D SG CYS 101 D CYS 101 1_555 D SG CYS 164 D CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf5 D SG CYS 203 D CYS 203 1_555 D SG CYS 259 D CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf6 E SG CYS 26 E CYS 26 1_555 E SG CYS 81 E CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     8TBV 
_atom_sites.fract_transf_matrix[1][1]    0.01607 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00002 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011531 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012615 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 PEG A 1 301 301 PEG PEG . 
H 5 GOL A 1 302 302 GOL GOL . 
I 5 GOL B 1 201 201 GOL GOL . 
J 6 HOH A 1 401 73 HOH HOH . 
J 6 HOH A 2 402 115 HOH HOH . 
J 6 HOH A 3 403 71 HOH HOH . 
J 6 HOH A 4 404 41 HOH HOH . 
J 6 HOH A 5 405 125 HOH HOH . 
J 6 HOH A 6 406 78 HOH HOH . 
J 6 HOH A 7 407 13 HOH HOH . 
J 6 HOH A 8 408 124 HOH HOH . 
J 6 HOH A 9 409 82 HOH HOH . 
J 6 HOH A 10 410 43 HOH HOH . 
J 6 HOH A 11 411 15 HOH HOH . 
J 6 HOH A 12 412 131 HOH HOH . 
J 6 HOH A 13 413 47 HOH HOH . 
J 6 HOH A 14 414 109 HOH HOH . 
J 6 HOH A 15 415 122 HOH HOH . 
J 6 HOH A 16 416 111 HOH HOH . 
J 6 HOH A 17 417 107 HOH HOH . 
J 6 HOH A 18 418 140 HOH HOH . 
J 6 HOH A 19 419 70 HOH HOH . 
J 6 HOH A 20 420 59 HOH HOH . 
J 6 HOH A 21 421 63 HOH HOH . 
J 6 HOH A 22 422 45 HOH HOH . 
J 6 HOH A 23 423 11 HOH HOH . 
J 6 HOH A 24 424 121 HOH HOH . 
J 6 HOH A 25 425 104 HOH HOH . 
J 6 HOH A 26 426 21 HOH HOH . 
J 6 HOH A 27 427 54 HOH HOH . 
J 6 HOH A 28 428 56 HOH HOH . 
J 6 HOH A 29 429 99 HOH HOH . 
J 6 HOH A 30 430 77 HOH HOH . 
J 6 HOH A 31 431 23 HOH HOH . 
J 6 HOH A 32 432 138 HOH HOH . 
J 6 HOH A 33 433 100 HOH HOH . 
J 6 HOH A 34 434 101 HOH HOH . 
J 6 HOH A 35 435 145 HOH HOH . 
J 6 HOH A 36 436 83 HOH HOH . 
J 6 HOH A 37 437 55 HOH HOH . 
J 6 HOH A 38 438 27 HOH HOH . 
J 6 HOH A 39 439 105 HOH HOH . 
J 6 HOH A 40 440 58 HOH HOH . 
J 6 HOH A 41 441 113 HOH HOH . 
J 6 HOH A 42 442 12 HOH HOH . 
J 6 HOH A 43 443 35 HOH HOH . 
J 6 HOH A 44 444 52 HOH HOH . 
J 6 HOH A 45 445 40 HOH HOH . 
J 6 HOH A 46 446 24 HOH HOH . 
J 6 HOH A 47 447 149 HOH HOH . 
J 6 HOH A 48 448 38 HOH HOH . 
J 6 HOH A 49 449 64 HOH HOH . 
J 6 HOH A 50 450 69 HOH HOH . 
J 6 HOH A 51 451 29 HOH HOH . 
J 6 HOH A 52 452 170 HOH HOH . 
J 6 HOH A 53 453 51 HOH HOH . 
J 6 HOH A 54 454 75 HOH HOH . 
J 6 HOH A 55 455 130 HOH HOH . 
J 6 HOH A 56 456 151 HOH HOH . 
J 6 HOH A 57 457 37 HOH HOH . 
J 6 HOH A 58 458 152 HOH HOH . 
J 6 HOH A 59 459 176 HOH HOH . 
J 6 HOH A 60 460 166 HOH HOH . 
J 6 HOH A 61 461 148 HOH HOH . 
J 6 HOH A 62 462 81 HOH HOH . 
J 6 HOH A 63 463 146 HOH HOH . 
J 6 HOH A 64 464 164 HOH HOH . 
J 6 HOH A 65 465 174 HOH HOH . 
J 6 HOH A 66 466 57 HOH HOH . 
J 6 HOH A 67 467 150 HOH HOH . 
J 6 HOH A 68 468 168 HOH HOH . 
J 6 HOH A 69 469 155 HOH HOH . 
J 6 HOH A 70 470 178 HOH HOH . 
J 6 HOH A 71 471 167 HOH HOH . 
J 6 HOH A 72 472 163 HOH HOH . 
K 6 HOH B 1 301 96 HOH HOH . 
K 6 HOH B 2 302 14 HOH HOH . 
K 6 HOH B 3 303 42 HOH HOH . 
K 6 HOH B 4 304 62 HOH HOH . 
K 6 HOH B 5 305 85 HOH HOH . 
K 6 HOH B 6 306 7 HOH HOH . 
K 6 HOH B 7 307 10 HOH HOH . 
K 6 HOH B 8 308 65 HOH HOH . 
K 6 HOH B 9 309 31 HOH HOH . 
K 6 HOH B 10 310 16 HOH HOH . 
K 6 HOH B 11 311 106 HOH HOH . 
K 6 HOH B 12 312 30 HOH HOH . 
K 6 HOH B 13 313 3 HOH HOH . 
K 6 HOH B 14 314 4 HOH HOH . 
K 6 HOH B 15 315 112 HOH HOH . 
K 6 HOH B 16 316 108 HOH HOH . 
K 6 HOH B 17 317 93 HOH HOH . 
K 6 HOH B 18 318 103 HOH HOH . 
K 6 HOH B 19 319 175 HOH HOH . 
K 6 HOH B 20 320 135 HOH HOH . 
K 6 HOH B 21 321 76 HOH HOH . 
L 6 HOH C 1 101 79 HOH HOH . 
L 6 HOH C 2 102 84 HOH HOH . 
L 6 HOH C 3 103 147 HOH HOH . 
M 6 HOH D 1 301 72 HOH HOH . 
M 6 HOH D 2 302 114 HOH HOH . 
M 6 HOH D 3 303 20 HOH HOH . 
M 6 HOH D 4 304 141 HOH HOH . 
M 6 HOH D 5 305 91 HOH HOH . 
M 6 HOH D 6 306 97 HOH HOH . 
M 6 HOH D 7 307 44 HOH HOH . 
M 6 HOH D 8 308 143 HOH HOH . 
M 6 HOH D 9 309 22 HOH HOH . 
M 6 HOH D 10 310 90 HOH HOH . 
M 6 HOH D 11 311 66 HOH HOH . 
M 6 HOH D 12 312 5 HOH HOH . 
M 6 HOH D 13 313 34 HOH HOH . 
M 6 HOH D 14 314 80 HOH HOH . 
M 6 HOH D 15 315 39 HOH HOH . 
M 6 HOH D 16 316 6 HOH HOH . 
M 6 HOH D 17 317 53 HOH HOH . 
M 6 HOH D 18 318 87 HOH HOH . 
M 6 HOH D 19 319 126 HOH HOH . 
M 6 HOH D 20 320 102 HOH HOH . 
M 6 HOH D 21 321 28 HOH HOH . 
M 6 HOH D 22 322 60 HOH HOH . 
M 6 HOH D 23 323 98 HOH HOH . 
M 6 HOH D 24 324 68 HOH HOH . 
M 6 HOH D 25 325 86 HOH HOH . 
M 6 HOH D 26 326 19 HOH HOH . 
M 6 HOH D 27 327 127 HOH HOH . 
M 6 HOH D 28 328 25 HOH HOH . 
M 6 HOH D 29 329 50 HOH HOH . 
M 6 HOH D 30 330 139 HOH HOH . 
M 6 HOH D 31 331 2 HOH HOH . 
M 6 HOH D 32 332 159 HOH HOH . 
M 6 HOH D 33 333 165 HOH HOH . 
M 6 HOH D 34 334 180 HOH HOH . 
M 6 HOH D 35 335 179 HOH HOH . 
M 6 HOH D 36 336 153 HOH HOH . 
M 6 HOH D 37 337 177 HOH HOH . 
M 6 HOH D 38 338 157 HOH HOH . 
M 6 HOH D 39 339 158 HOH HOH . 
M 6 HOH D 40 340 95 HOH HOH . 
M 6 HOH D 41 341 162 HOH HOH . 
M 6 HOH D 42 342 171 HOH HOH . 
M 6 HOH D 43 343 119 HOH HOH . 
M 6 HOH D 44 344 120 HOH HOH . 
M 6 HOH D 45 345 154 HOH HOH . 
M 6 HOH D 46 346 169 HOH HOH . 
N 6 HOH E 1 201 61 HOH HOH . 
N 6 HOH E 2 202 74 HOH HOH . 
N 6 HOH E 3 203 132 HOH HOH . 
N 6 HOH E 4 204 134 HOH HOH . 
N 6 HOH E 5 205 8 HOH HOH . 
N 6 HOH E 6 206 92 HOH HOH . 
N 6 HOH E 7 207 32 HOH HOH . 
N 6 HOH E 8 208 18 HOH HOH . 
N 6 HOH E 9 209 133 HOH HOH . 
N 6 HOH E 10 210 49 HOH HOH . 
N 6 HOH E 11 211 17 HOH HOH . 
N 6 HOH E 12 212 136 HOH HOH . 
N 6 HOH E 13 213 9 HOH HOH . 
N 6 HOH E 14 214 1 HOH HOH . 
N 6 HOH E 15 215 88 HOH HOH . 
N 6 HOH E 16 216 173 HOH HOH . 
N 6 HOH E 17 217 156 HOH HOH . 
N 6 HOH E 18 218 160 HOH HOH . 
N 6 HOH E 19 219 161 HOH HOH . 
N 6 HOH E 20 220 172 HOH HOH . 
N 6 HOH E 21 221 128 HOH HOH . 
O 6 HOH F 1 101 26 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 5 15.243 -6.2 15.747 1 37.78 ? C1 GOL 302 A 1 
HETATM 2 O O1 GOL . . . H 5 14.821 -7.526 15.869 1 45.8 ? O1 GOL 302 A 1 
HETATM 3 C C2 GOL . . . H 5 14.07 -5.295 16.209 1 31.22 ? C2 GOL 302 A 1 
HETATM 4 O O2 GOL . . . H 5 14.446 -3.965 16.305 1 40.61 ? O2 GOL 302 A 1 
HETATM 5 C C3 GOL . . . H 5 12.963 -5.497 15.155 1 37.13 ? C3 GOL 302 A 1 
HETATM 6 O O3 GOL . . . H 5 11.789 -5.006 15.721 1 32.09 ? O3 GOL 302 A 1 
#
_model_server_stats.io_time_ms              37 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           352 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#