data_8TF0 # _model_server_result.job_id t-56wspuw8mGpUbq2ltHbQ _model_server_result.datetime_utc '2024-12-01 03:10:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tf0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":401}' # _entry.id 8TF0 # _exptl.entry_id 8TF0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8TF0 _cell.length_a 96.282 _cell.length_b 104.392 _cell.length_c 172.284 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TF0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,J,K,L,M,N,LA 1 1 B,O,P,Q,R,S,T,U,V,W,X,MA 2 1 C,Y,Z,AA,NA 3 1 D,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,OA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 I N N ? 2 O N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 EA N N ? 2 FA N N ? 2 GA N N ? 2 HA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 2 B SER 66 1_555 E MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc2 A OE2 GLU 7 B GLU 71 1_555 E MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc3 A OD2 ASP 162 B ASP 226 1_555 I MG MG . B MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.881 ? metalc ? metalc4 LA O HOH . B HOH 518 3_645 HA MG MG . D MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc5 B OG SER 2 A SER 66 1_555 O MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc6 B OE2 GLU 7 A GLU 71 1_555 O MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.882 ? metalc ? metalc7 EA MG MG . D MG 404 1_555 OA O HOH . D HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc8 FA MG MG . D MG 405 1_555 OA O HOH . D HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.832 ? metalc ? metalc9 GA MG MG . D MG 406 1_555 OA O HOH . D HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8TF0 _atom_sites.fract_transf_matrix[1][1] 0.010386 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009579 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005804 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG B 1 401 401 MG MG . F 3 ZUY B 1 402 501 ZUY LIG . G 4 GOL B 1 403 601 GOL GOL . H 2 MG B 1 404 4 MG MG . I 2 MG B 1 405 14 MG MG . J 5 SO4 B 1 406 3 SO4 SO4 . K 5 SO4 B 1 407 4 SO4 SO4 . L 5 SO4 B 1 408 5 SO4 SO4 . M 5 SO4 B 1 409 11 SO4 SO4 . N 5 SO4 B 1 410 12 SO4 SO4 . O 2 MG A 1 401 401 MG MG . P 3 ZUY A 1 402 601 ZUY LIG . Q 4 GOL A 1 403 701 GOL GOL . R 4 GOL A 1 404 801 GOL GOL . S 2 MG A 1 405 2 MG MG . T 2 MG A 1 406 11 MG MG . U 2 MG A 1 407 12 MG MG . V 5 SO4 A 1 408 1 SO4 SO4 . W 5 SO4 A 1 409 8 SO4 SO4 . X 5 SO4 A 1 410 14 SO4 SO4 . Y 3 ZUY C 1 401 401 ZUY LIG . Z 5 SO4 C 1 402 6 SO4 SO4 . AA 5 SO4 C 1 403 7 SO4 SO4 . BA 3 ZUY D 1 401 401 ZUY LIG . CA 4 GOL D 1 402 501 GOL GOL . DA 6 MN D 1 403 601 MN MN . EA 2 MG D 1 404 9 MG MG . FA 2 MG D 1 405 10 MG MG . GA 2 MG D 1 406 15 MG MG . HA 2 MG D 1 407 16 MG MG . IA 5 SO4 D 1 408 9 SO4 SO4 . JA 5 SO4 D 1 409 10 SO4 SO4 . KA 5 SO4 D 1 410 13 SO4 SO4 . LA 7 HOH B 1 501 71 HOH HOH . LA 7 HOH B 2 502 21 HOH HOH . LA 7 HOH B 3 503 68 HOH HOH . LA 7 HOH B 4 504 55 HOH HOH . LA 7 HOH B 5 505 73 HOH HOH . LA 7 HOH B 6 506 75 HOH HOH . LA 7 HOH B 7 507 22 HOH HOH . LA 7 HOH B 8 508 64 HOH HOH . LA 7 HOH B 9 509 40 HOH HOH . LA 7 HOH B 10 510 41 HOH HOH . LA 7 HOH B 11 511 57 HOH HOH . LA 7 HOH B 12 512 83 HOH HOH . LA 7 HOH B 13 513 44 HOH HOH . LA 7 HOH B 14 514 74 HOH HOH . LA 7 HOH B 15 515 72 HOH HOH . LA 7 HOH B 16 516 11 HOH HOH . LA 7 HOH B 17 517 14 HOH HOH . LA 7 HOH B 18 518 80 HOH HOH . LA 7 HOH B 19 519 52 HOH HOH . LA 7 HOH B 20 520 56 HOH HOH . LA 7 HOH B 21 521 69 HOH HOH . LA 7 HOH B 22 522 13 HOH HOH . LA 7 HOH B 23 523 82 HOH HOH . LA 7 HOH B 24 524 67 HOH HOH . LA 7 HOH B 25 525 10 HOH HOH . LA 7 HOH B 26 526 39 HOH HOH . LA 7 HOH B 27 527 42 HOH HOH . LA 7 HOH B 28 528 58 HOH HOH . LA 7 HOH B 29 529 70 HOH HOH . LA 7 HOH B 30 530 59 HOH HOH . LA 7 HOH B 31 531 79 HOH HOH . MA 7 HOH A 1 501 36 HOH HOH . MA 7 HOH A 2 502 50 HOH HOH . MA 7 HOH A 3 503 65 HOH HOH . MA 7 HOH A 4 504 501 HOH HOH . MA 7 HOH A 5 505 2 HOH HOH . MA 7 HOH A 6 506 7 HOH HOH . MA 7 HOH A 7 507 5 HOH HOH . MA 7 HOH A 8 508 23 HOH HOH . MA 7 HOH A 9 509 54 HOH HOH . NA 7 HOH C 1 501 66 HOH HOH . NA 7 HOH C 2 502 86 HOH HOH . NA 7 HOH C 3 503 85 HOH HOH . NA 7 HOH C 4 504 78 HOH HOH . NA 7 HOH C 5 505 47 HOH HOH . NA 7 HOH C 6 506 87 HOH HOH . NA 7 HOH C 7 507 46 HOH HOH . NA 7 HOH C 8 508 48 HOH HOH . NA 7 HOH C 9 509 84 HOH HOH . NA 7 HOH C 10 510 77 HOH HOH . OA 7 HOH D 1 501 45 HOH HOH . OA 7 HOH D 2 502 88 HOH HOH . OA 7 HOH D 3 503 62 HOH HOH . OA 7 HOH D 4 504 28 HOH HOH . OA 7 HOH D 5 505 29 HOH HOH . OA 7 HOH D 6 506 60 HOH HOH . OA 7 HOH D 7 507 3 HOH HOH . OA 7 HOH D 8 508 31 HOH HOH . OA 7 HOH D 9 509 81 HOH HOH . OA 7 HOH D 10 510 15 HOH HOH . OA 7 HOH D 11 511 76 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id O _atom_site.label_entity_id 2 _atom_site.Cartn_x 32.808 _atom_site.Cartn_y -0.202 _atom_site.Cartn_z 8.918 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 56.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #