data_8TF5 # _model_server_result.job_id vPJtePovJ9OipKoMYtKInA _model_server_result.datetime_utc '2024-12-13 17:24:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tf5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1203}' # _entry.id 8TF5 # _exptl.entry_id 8TF5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 296.357 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8TF5 _cell.length_a 57.033 _cell.length_b 96.867 _cell.length_c 97.563 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TF5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 178 A CYS 209 1_555 A SG CYS 185 A CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? covale ? covale1 A C ILE 217 A ILE 248 1_555 A N YCM 218 A YCM 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C YCM 218 A YCM 249 1_555 A N GLN 219 A GLN 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C13 H28 O7' _chem_comp.formula_weight 296.357 _chem_comp.id P15 _chem_comp.mon_nstd_flag . _chem_comp.name 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 O6 P15 sing 431 n n C13 H131 P15 sing 432 n n C13 H132 P15 sing 433 n n C13 H133 P15 sing 434 n n O6 C12 P15 sing 435 n n C12 C11 P15 sing 436 n n C12 H121 P15 sing 437 n n C12 H122 P15 sing 438 n n C11 O5 P15 sing 439 n n C11 H111 P15 sing 440 n n C11 H112 P15 sing 441 n n O5 C10 P15 sing 442 n n C10 C9 P15 sing 443 n n C10 H101 P15 sing 444 n n C10 H102 P15 sing 445 n n C9 O4 P15 sing 446 n n C9 H91 P15 sing 447 n n C9 H92 P15 sing 448 n n O4 C8 P15 sing 449 n n C8 C7 P15 sing 450 n n C8 H81 P15 sing 451 n n C8 H82 P15 sing 452 n n C7 O3 P15 sing 453 n n C7 H71 P15 sing 454 n n C7 H72 P15 sing 455 n n O3 C6 P15 sing 456 n n C6 C5 P15 sing 457 n n C6 H61 P15 sing 458 n n C6 H62 P15 sing 459 n n C5 O2 P15 sing 460 n n C5 H51 P15 sing 461 n n C5 H52 P15 sing 462 n n O2 C4 P15 sing 463 n n C4 C3 P15 sing 464 n n C4 H41 P15 sing 465 n n C4 H42 P15 sing 466 n n C3 O1 P15 sing 467 n n C3 H31 P15 sing 468 n n C3 H32 P15 sing 469 n n O1 C2 P15 sing 470 n n C2 C1 P15 sing 471 n n C2 H21 P15 sing 472 n n C2 H22 P15 sing 473 n n C1 OXT P15 sing 474 n n C1 H11 P15 sing 475 n n C1 H12 P15 sing 476 n n OXT HOXT P15 sing 477 n n # _atom_sites.entry_id 8TF5 _atom_sites.fract_transf_matrix[1][1] 0.017534 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010323 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01025 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLC A 1 1201 501 OLC OLC . C 2 OLC A 1 1202 1901 OLC OLC . D 3 P15 A 1 1203 2001 P15 P15 . E 4 OLA A 1 1204 2101 OLA OLA . F 3 P15 A 1 1205 2301 P15 P15 . G 4 OLA A 1 1206 2401 OLA OLA . H 4 OLA A 1 1207 2501 OLA OLA . I 4 OLA A 1 1208 2801 OLA OLA . J 4 OLA A 1 1209 2901 OLA OLA . K 4 OLA A 1 1210 3001 OLA OLA . L 2 OLC A 1 1211 3002 OLC OLC . M 2 OLC A 1 1212 3003 OLC OLC . N 4 OLA A 1 1213 3004 OLA OLA . O 2 OLC A 1 1214 3005 OLC OLC . P 4 OLA A 1 1215 3006 OLA OLA . Q 4 OLA A 1 1216 3007 OLA OLA . R 4 OLA A 1 1217 3008 OLA OLA . S 4 OLA A 1 1218 2101 OLA OLA . T 4 OLA A 1 1219 2201 OLA OLA . U 5 CLR A 1 1220 2901 CLR CLR . V 6 HOH A 1 1301 95 HOH HOH . V 6 HOH A 2 1302 157 HOH HOH . V 6 HOH A 3 1303 123 HOH HOH . V 6 HOH A 4 1304 145 HOH HOH . V 6 HOH A 5 1305 147 HOH HOH . V 6 HOH A 6 1306 10 HOH HOH . V 6 HOH A 7 1307 109 HOH HOH . V 6 HOH A 8 1308 132 HOH HOH . V 6 HOH A 9 1309 2 HOH HOH . V 6 HOH A 10 1310 156 HOH HOH . V 6 HOH A 11 1311 154 HOH HOH . V 6 HOH A 12 1312 1 HOH HOH . V 6 HOH A 13 1313 22 HOH HOH . V 6 HOH A 14 1314 153 HOH HOH . V 6 HOH A 15 1315 12 HOH HOH . V 6 HOH A 16 1316 138 HOH HOH . V 6 HOH A 17 1317 124 HOH HOH . V 6 HOH A 18 1318 7 HOH HOH . V 6 HOH A 19 1319 9 HOH HOH . V 6 HOH A 20 1320 122 HOH HOH . V 6 HOH A 21 1321 135 HOH HOH . V 6 HOH A 22 1322 3 HOH HOH . V 6 HOH A 23 1323 6 HOH HOH . V 6 HOH A 24 1324 143 HOH HOH . V 6 HOH A 25 1325 119 HOH HOH . V 6 HOH A 26 1326 151 HOH HOH . V 6 HOH A 27 1327 96 HOH HOH . V 6 HOH A 28 1328 158 HOH HOH . V 6 HOH A 29 1329 137 HOH HOH . V 6 HOH A 30 1330 58 HOH HOH . V 6 HOH A 31 1331 75 HOH HOH . V 6 HOH A 32 1332 148 HOH HOH . V 6 HOH A 33 1333 146 HOH HOH . V 6 HOH A 34 1334 163 HOH HOH . V 6 HOH A 35 1335 11 HOH HOH . V 6 HOH A 36 1336 121 HOH HOH . V 6 HOH A 37 1337 128 HOH HOH . V 6 HOH A 38 1338 82 HOH HOH . V 6 HOH A 39 1339 65 HOH HOH . V 6 HOH A 40 1340 160 HOH HOH . V 6 HOH A 41 1341 130 HOH HOH . V 6 HOH A 42 1342 159 HOH HOH . V 6 HOH A 43 1343 149 HOH HOH . V 6 HOH A 44 1344 94 HOH HOH . V 6 HOH A 45 1345 161 HOH HOH . V 6 HOH A 46 1346 144 HOH HOH . V 6 HOH A 47 1347 140 HOH HOH . V 6 HOH A 48 1348 120 HOH HOH . V 6 HOH A 49 1349 29 HOH HOH . V 6 HOH A 50 1350 4 HOH HOH . V 6 HOH A 51 1351 136 HOH HOH . V 6 HOH A 52 1352 127 HOH HOH . V 6 HOH A 53 1353 74 HOH HOH . V 6 HOH A 54 1354 19 HOH HOH . V 6 HOH A 55 1355 150 HOH HOH . V 6 HOH A 56 1356 101 HOH HOH . V 6 HOH A 57 1357 125 HOH HOH . V 6 HOH A 58 1358 116 HOH HOH . V 6 HOH A 59 1359 142 HOH HOH . V 6 HOH A 60 1360 48 HOH HOH . V 6 HOH A 61 1361 111 HOH HOH . V 6 HOH A 62 1362 83 HOH HOH . V 6 HOH A 63 1363 162 HOH HOH . V 6 HOH A 64 1364 152 HOH HOH . V 6 HOH A 65 1365 133 HOH HOH . V 6 HOH A 66 1366 105 HOH HOH . V 6 HOH A 67 1367 98 HOH HOH . V 6 HOH A 68 1368 118 HOH HOH . V 6 HOH A 69 1369 80 HOH HOH . V 6 HOH A 70 1370 41 HOH HOH . V 6 HOH A 71 1371 155 HOH HOH . V 6 HOH A 72 1372 141 HOH HOH . V 6 HOH A 73 1373 117 HOH HOH . V 6 HOH A 74 1374 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 P15 . . . D 3 18.486 19.077 25.809 1 77.86 ? C13 P15 1203 A 1 HETATM 2 O O6 P15 . . . D 3 17.701 18.305 26.675 1 90.09 ? O6 P15 1203 A 1 HETATM 3 C C12 P15 . . . D 3 17.445 17.007 26.216 1 94.38 ? C12 P15 1203 A 1 HETATM 4 C C11 P15 . . . D 3 16.668 16.222 27.274 1 73.65 ? C11 P15 1203 A 1 HETATM 5 O O5 P15 . . . D 3 17.55 15.711 28.237 1 75.93 ? O5 P15 1203 A 1 HETATM 6 C C10 P15 . . . D 3 16.932 14.982 29.262 1 60.36 ? C10 P15 1203 A 1 HETATM 7 C C9 P15 . . . D 3 17.86 14.894 30.473 1 64.68 ? C9 P15 1203 A 1 HETATM 8 O O4 P15 . . . D 3 17.234 15.5 31.57 1 63.24 ? O4 P15 1203 A 1 HETATM 9 C C8 P15 . . . D 3 18.082 15.818 32.639 1 69.15 ? C8 P15 1203 A 1 HETATM 10 C C7 P15 . . . D 3 17.324 16.677 33.652 1 61.89 ? C7 P15 1203 A 1 HETATM 11 O O3 P15 . . . D 3 17.359 18.018 33.251 1 75.39 ? O3 P15 1203 A 1 HETATM 12 C C6 P15 . . . D 3 16.295 18.802 33.713 1 55.26 ? C6 P15 1203 A 1 HETATM 13 C C5 P15 . . . D 3 16.397 18.955 35.225 1 71.68 ? C5 P15 1203 A 1 HETATM 14 O O2 P15 . . . D 3 17.745 19.076 35.57 1 77.33 ? O2 P15 1203 A 1 HETATM 15 C C4 P15 . . . D 3 17.989 19.47 36.888 1 59.43 ? C4 P15 1203 A 1 HETATM 16 C C3 P15 . . . D 3 17.792 18.288 37.837 1 66.83 ? C3 P15 1203 A 1 HETATM 17 O O1 P15 . . . D 3 18.997 17.589 38.002 1 48.63 ? O1 P15 1203 A 1 HETATM 18 C C2 P15 . . . D 3 18.828 16.258 38.397 1 49.32 ? C2 P15 1203 A 1 HETATM 19 C C1 P15 . . . D 3 19.57 15.962 39.69 1 53.38 ? C1 P15 1203 A 1 HETATM 20 O OXT P15 . . . D 3 19.332 14.621 40.021 1 57.79 ? OXT P15 1203 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 20 #