data_8TFO # _model_server_result.job_id yu8D8Xbu6wBYuEbd6Jyqyw _model_server_result.datetime_utc '2024-11-15 11:54:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tfo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 8TFO # _exptl.entry_id 8TFO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 147.149 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (R)-MEVALONATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8TFO _cell.length_a 45.081 _cell.length_b 80.705 _cell.length_c 207.467 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TFO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 192 A CYS 183 1_555 A SG CYS 197 A CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf2 B SG CYS 192 B CYS 183 1_555 B SG CYS 197 B CYS 188 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc1 A OD1 ASN 332 A ASN 323 1_555 G CA CA . B CA 503 4_566 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc2 H O HOH . A HOH 660 4_466 G CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc3 B OD1 ASN 332 B ASN 323 1_555 G CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? # _chem_comp.formula 'C6 H11 O4 -1' _chem_comp.formula_weight 147.149 _chem_comp.id MEV _chem_comp.mon_nstd_flag . _chem_comp.name (R)-MEVALONATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 O8 MEV sing 237 n n C8 C2 MEV sing 238 n n C8 H81 MEV sing 239 n n C8 H82 MEV sing 240 n n O8 HX2 MEV sing 241 n n C2 C3 MEV sing 242 n n C2 H21 MEV sing 243 n n C2 H22 MEV sing 244 n n C3 O7 MEV sing 245 n n C3 C4 MEV sing 246 n n C3 C6 MEV sing 247 n n O7 HX MEV sing 248 n n C4 C5 MEV sing 249 n n C4 H41 MEV sing 250 n n C4 H42 MEV sing 251 n n C5 O3 MEV doub 252 n n C5 O4 MEV sing 253 n n C6 H61 MEV sing 254 n n C6 H62 MEV sing 255 n n C6 H63 MEV sing 256 n n # _atom_sites.entry_id 8TFO _atom_sites.fract_transf_matrix[1][1] 0.022182 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012391 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00482 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MEV A 1 501 501 MEV MEV . D 3 PEG A 1 502 502 PEG PEG . E 2 MEV B 1 501 501 MEV MEV . F 3 PEG B 1 502 502 PEG PEG . G 4 CA B 1 503 1 CA CA . H 5 HOH A 1 601 90 HOH HOH . H 5 HOH A 2 602 27 HOH HOH . H 5 HOH A 3 603 147 HOH HOH . H 5 HOH A 4 604 127 HOH HOH . H 5 HOH A 5 605 96 HOH HOH . H 5 HOH A 6 606 11 HOH HOH . H 5 HOH A 7 607 86 HOH HOH . H 5 HOH A 8 608 123 HOH HOH . H 5 HOH A 9 609 43 HOH HOH . H 5 HOH A 10 610 97 HOH HOH . H 5 HOH A 11 611 66 HOH HOH . H 5 HOH A 12 612 77 HOH HOH . H 5 HOH A 13 613 140 HOH HOH . H 5 HOH A 14 614 115 HOH HOH . H 5 HOH A 15 615 82 HOH HOH . H 5 HOH A 16 616 26 HOH HOH . H 5 HOH A 17 617 128 HOH HOH . H 5 HOH A 18 618 24 HOH HOH . H 5 HOH A 19 619 25 HOH HOH . H 5 HOH A 20 620 89 HOH HOH . H 5 HOH A 21 621 39 HOH HOH . H 5 HOH A 22 622 119 HOH HOH . H 5 HOH A 23 623 84 HOH HOH . H 5 HOH A 24 624 99 HOH HOH . H 5 HOH A 25 625 21 HOH HOH . H 5 HOH A 26 626 146 HOH HOH . H 5 HOH A 27 627 37 HOH HOH . H 5 HOH A 28 628 148 HOH HOH . H 5 HOH A 29 629 106 HOH HOH . H 5 HOH A 30 630 36 HOH HOH . H 5 HOH A 31 631 76 HOH HOH . H 5 HOH A 32 632 58 HOH HOH . H 5 HOH A 33 633 14 HOH HOH . H 5 HOH A 34 634 98 HOH HOH . H 5 HOH A 35 635 126 HOH HOH . H 5 HOH A 36 636 71 HOH HOH . H 5 HOH A 37 637 109 HOH HOH . H 5 HOH A 38 638 129 HOH HOH . H 5 HOH A 39 639 68 HOH HOH . H 5 HOH A 40 640 85 HOH HOH . H 5 HOH A 41 641 73 HOH HOH . H 5 HOH A 42 642 19 HOH HOH . H 5 HOH A 43 643 32 HOH HOH . H 5 HOH A 44 644 112 HOH HOH . H 5 HOH A 45 645 54 HOH HOH . H 5 HOH A 46 646 13 HOH HOH . H 5 HOH A 47 647 100 HOH HOH . H 5 HOH A 48 648 49 HOH HOH . H 5 HOH A 49 649 9 HOH HOH . H 5 HOH A 50 650 18 HOH HOH . H 5 HOH A 51 651 91 HOH HOH . H 5 HOH A 52 652 55 HOH HOH . H 5 HOH A 53 653 78 HOH HOH . H 5 HOH A 54 654 69 HOH HOH . H 5 HOH A 55 655 114 HOH HOH . H 5 HOH A 56 656 103 HOH HOH . H 5 HOH A 57 657 94 HOH HOH . H 5 HOH A 58 658 47 HOH HOH . H 5 HOH A 59 659 2 HOH HOH . H 5 HOH A 60 660 67 HOH HOH . H 5 HOH A 61 661 116 HOH HOH . H 5 HOH A 62 662 149 HOH HOH . H 5 HOH A 63 663 143 HOH HOH . H 5 HOH A 64 664 138 HOH HOH . I 5 HOH B 1 601 124 HOH HOH . I 5 HOH B 2 602 139 HOH HOH . I 5 HOH B 3 603 137 HOH HOH . I 5 HOH B 4 604 88 HOH HOH . I 5 HOH B 5 605 45 HOH HOH . I 5 HOH B 6 606 33 HOH HOH . I 5 HOH B 7 607 12 HOH HOH . I 5 HOH B 8 608 87 HOH HOH . I 5 HOH B 9 609 63 HOH HOH . I 5 HOH B 10 610 145 HOH HOH . I 5 HOH B 11 611 107 HOH HOH . I 5 HOH B 12 612 72 HOH HOH . I 5 HOH B 13 613 46 HOH HOH . I 5 HOH B 14 614 51 HOH HOH . I 5 HOH B 15 615 28 HOH HOH . I 5 HOH B 16 616 135 HOH HOH . I 5 HOH B 17 617 105 HOH HOH . I 5 HOH B 18 618 95 HOH HOH . I 5 HOH B 19 619 111 HOH HOH . I 5 HOH B 20 620 57 HOH HOH . I 5 HOH B 21 621 65 HOH HOH . I 5 HOH B 22 622 48 HOH HOH . I 5 HOH B 23 623 15 HOH HOH . I 5 HOH B 24 624 142 HOH HOH . I 5 HOH B 25 625 16 HOH HOH . I 5 HOH B 26 626 42 HOH HOH . I 5 HOH B 27 627 41 HOH HOH . I 5 HOH B 28 628 29 HOH HOH . I 5 HOH B 29 629 81 HOH HOH . I 5 HOH B 30 630 23 HOH HOH . I 5 HOH B 31 631 79 HOH HOH . I 5 HOH B 32 632 102 HOH HOH . I 5 HOH B 33 633 20 HOH HOH . I 5 HOH B 34 634 5 HOH HOH . I 5 HOH B 35 635 22 HOH HOH . I 5 HOH B 36 636 4 HOH HOH . I 5 HOH B 37 637 52 HOH HOH . I 5 HOH B 38 638 120 HOH HOH . I 5 HOH B 39 639 64 HOH HOH . I 5 HOH B 40 640 108 HOH HOH . I 5 HOH B 41 641 122 HOH HOH . I 5 HOH B 42 642 113 HOH HOH . I 5 HOH B 43 643 56 HOH HOH . I 5 HOH B 44 644 121 HOH HOH . I 5 HOH B 45 645 38 HOH HOH . I 5 HOH B 46 646 35 HOH HOH . I 5 HOH B 47 647 83 HOH HOH . I 5 HOH B 48 648 118 HOH HOH . I 5 HOH B 49 649 50 HOH HOH . I 5 HOH B 50 650 104 HOH HOH . I 5 HOH B 51 651 110 HOH HOH . I 5 HOH B 52 652 92 HOH HOH . I 5 HOH B 53 653 75 HOH HOH . I 5 HOH B 54 654 74 HOH HOH . I 5 HOH B 55 655 30 HOH HOH . I 5 HOH B 56 656 3 HOH HOH . I 5 HOH B 57 657 6 HOH HOH . I 5 HOH B 58 658 70 HOH HOH . I 5 HOH B 59 659 134 HOH HOH . I 5 HOH B 60 660 31 HOH HOH . I 5 HOH B 61 661 80 HOH HOH . I 5 HOH B 62 662 61 HOH HOH . I 5 HOH B 63 663 8 HOH HOH . I 5 HOH B 64 664 34 HOH HOH . I 5 HOH B 65 665 101 HOH HOH . I 5 HOH B 66 666 40 HOH HOH . I 5 HOH B 67 667 117 HOH HOH . I 5 HOH B 68 668 62 HOH HOH . I 5 HOH B 69 669 44 HOH HOH . I 5 HOH B 70 670 10 HOH HOH . I 5 HOH B 71 671 144 HOH HOH . I 5 HOH B 72 672 132 HOH HOH . I 5 HOH B 73 673 7 HOH HOH . I 5 HOH B 74 674 93 HOH HOH . I 5 HOH B 75 675 17 HOH HOH . I 5 HOH B 76 676 151 HOH HOH . I 5 HOH B 77 677 131 HOH HOH . I 5 HOH B 78 678 1 HOH HOH . I 5 HOH B 79 679 53 HOH HOH . I 5 HOH B 80 680 130 HOH HOH . I 5 HOH B 81 681 141 HOH HOH . I 5 HOH B 82 682 59 HOH HOH . I 5 HOH B 83 683 150 HOH HOH . I 5 HOH B 84 684 60 HOH HOH . I 5 HOH B 85 685 136 HOH HOH . I 5 HOH B 86 686 125 HOH HOH . I 5 HOH B 87 687 133 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 MEV . . . C 2 38.475 74.509 120.409 1 39.89 0 C8 MEV 501 A 1 HETATM 2 O O8 MEV . . . C 2 37.795 75.663 120.87 1 38.83 0 O8 MEV 501 A 1 HETATM 3 C C2 MEV . . . C 2 39.513 74.91 119.401 1 36.59 0 C2 MEV 501 A 1 HETATM 4 C C3 MEV . . . C 2 40.054 73.782 118.512 1 34.69 0 C3 MEV 501 A 1 HETATM 5 O O7 MEV . . . C 2 41.209 74.303 117.823 1 33.17 0 O7 MEV 501 A 1 HETATM 6 C C4 MEV . . . C 2 40.428 72.574 119.379 1 34.03 0 C4 MEV 501 A 1 HETATM 7 C C5 MEV . . . C 2 41.538 72.883 120.364 1 33.79 0 C5 MEV 501 A 1 HETATM 8 O O3 MEV . . . C 2 41.504 72.308 121.454 1 35.59 0 O3 MEV 501 A 1 HETATM 9 O O4 MEV . . . C 2 42.443 73.67 120.02 1 31.01 0 O4 MEV 501 A 1 HETATM 10 C C6 MEV . . . C 2 39.061 73.368 117.437 1 33.42 0 C6 MEV 501 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #