data_8TFT
#
_model_server_result.job_id            d7_4MV4OqZlKMBopkSbUTQ 
_model_server_result.datetime_utc      '2024-10-18 06:17:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8tft 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":201}' 
#
_entry.id    8TFT 
#
_exptl.entry_id    8TFT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.897 
_cell.angle_gamma         90 
_cell.entry_id            8TFT 
_cell.length_a            218.338 
_cell.length_b            69.785 
_cell.length_c            93.632 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8TFT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
? trimeric 3 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,G,I,J 1 1 
D,E,F,H,K,L,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 I CYS 22 1_555 A SG CYS 96 I CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? 
disulf ? disulf2 A SG CYS 149 I CYS 149 1_555 A SG CYS 205 I CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? 
disulf ? disulf3 B SG CYS 22 M CYS 22 1_555 B SG CYS 87 M CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? 
disulf ? disulf4 B SG CYS 136 M CYS 136 1_555 B SG CYS 195 M CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
disulf ? disulf5 C SG CYS 17 F CYS 17 1_555 C SG CYS 89 F CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
disulf ? disulf6 C SG CYS 31 F CYS 31 1_555 C SG CYS 42 F CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? 
disulf ? disulf7 C SG CYS 37 F CYS 37 1_555 C SG CYS 88 F CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? 
disulf ? disulf8 D SG CYS 22 H CYS 22 1_555 D SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
disulf ? disulf9 D SG CYS 149 H CYS 149 1_555 D SG CYS 205 H CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
disulf ? disulf10 E SG CYS 22 L CYS 22 1_555 E SG CYS 87 L CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
disulf ? disulf11 E SG CYS 136 L CYS 136 1_555 E SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
disulf ? disulf12 F SG CYS 17 G CYS 17 1_555 F SG CYS 89 G CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? 
disulf ? disulf13 F SG CYS 31 G CYS 31 1_555 F SG CYS 42 G CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
disulf ? disulf14 F SG CYS 37 G CYS 37 1_555 F SG CYS 88 G CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     8TFT 
_atom_sites.fract_transf_matrix[1][1]    0.00458 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000799 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01433 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010841 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 NAG F 1 201 110 NAG NAG . 
H 4 NAG G 1 201 110 NAG NAG . 
I 5 HOH I 1 301 8 HOH HOH . 
I 5 HOH I 2 302 48 HOH HOH . 
I 5 HOH I 3 303 12 HOH HOH . 
I 5 HOH I 4 304 49 HOH HOH . 
I 5 HOH I 5 305 50 HOH HOH . 
I 5 HOH I 6 306 52 HOH HOH . 
I 5 HOH I 7 307 7 HOH HOH . 
J 5 HOH F 1 301 47 HOH HOH . 
J 5 HOH F 2 302 4 HOH HOH . 
J 5 HOH F 3 303 10 HOH HOH . 
K 5 HOH H 1 301 17 HOH HOH . 
K 5 HOH H 2 302 3 HOH HOH . 
K 5 HOH H 3 303 1 HOH HOH . 
K 5 HOH H 4 304 16 HOH HOH . 
K 5 HOH H 5 305 46 HOH HOH . 
K 5 HOH H 6 306 44 HOH HOH . 
K 5 HOH H 7 307 27 HOH HOH . 
K 5 HOH H 8 308 51 HOH HOH . 
K 5 HOH H 9 309 31 HOH HOH . 
L 5 HOH L 1 301 18 HOH HOH . 
M 5 HOH G 1 301 2 HOH HOH . 
M 5 HOH G 2 302 15 HOH HOH . 
M 5 HOH G 3 303 5 HOH HOH . 
M 5 HOH G 4 304 14 HOH HOH . 
M 5 HOH G 5 305 9 HOH HOH . 
M 5 HOH G 6 306 6 HOH HOH . 
M 5 HOH G 7 307 45 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . H 4 -18.761 -21.459 -2.12 1 102.36 0 C1 NAG 201 G 1 
HETATM 2 C C2 NAG . . . H 4 -18.241 -20.57 -3.258 1 103.37 0 C2 NAG 201 G 1 
HETATM 3 C C3 NAG . . . H 4 -18.256 -19.08 -2.905 1 104.45 0 C3 NAG 201 G 1 
HETATM 4 C C4 NAG . . . H 4 -19.375 -18.725 -1.934 1 107.36 0 C4 NAG 201 G 1 
HETATM 5 C C5 NAG . . . H 4 -19.238 -19.599 -0.693 1 105.86 0 C5 NAG 201 G 1 
HETATM 6 C C6 NAG . . . H 4 -20.156 -19.201 0.444 1 103.55 0 C6 NAG 201 G 1 
HETATM 7 C C7 NAG . . . H 4 -16.612 -21.948 -4.524 1 94.34 0 C7 NAG 201 G 1 
HETATM 8 C C8 NAG . . . H 4 -15.238 -21.909 -5.124 1 90 0 C8 NAG 201 G 1 
HETATM 9 N N2 NAG . . . H 4 -16.903 -20.976 -3.65 1 102.27 0 N2 NAG 201 G 1 
HETATM 10 O O3 NAG . . . H 4 -18.376 -18.322 -4.103 1 103.35 0 O3 NAG 201 G 1 
HETATM 11 O O4 NAG . . . H 4 -19.291 -17.347 -1.577 1 103.58 0 O4 NAG 201 G 1 
HETATM 12 O O5 NAG . . . H 4 -19.584 -20.939 -1.086 1 107.58 0 O5 NAG 201 G 1 
HETATM 13 O O6 NAG . . . H 4 -20.465 -20.306 1.295 1 98.37 0 O6 NAG 201 G 1 
HETATM 14 O O7 NAG . . . H 4 -17.413 -22.834 -4.804 1 89.21 0 O7 NAG 201 G 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#