data_8TGN
#
_model_server_result.job_id            oxOULgQyLofclvMj7-0ySQ 
_model_server_result.datetime_utc      '2024-10-26 14:16:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8tgn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":601}' 
#
_entry.id    8TGN 
#
_exptl.entry_id    8TGN 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              176.215 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            SEROTONIN 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8TGN 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8TGN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
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_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H12 N2 O' 
_chem_comp.formula_weight    176.215 
_chem_comp.id                SRO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              SEROTONIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     3-(2-AMINOETHYL)-1H-INDOL-5-OL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OH CZ3 SRO sing 288 n n 
OH HOH SRO sing 289 n n 
CZ3 CE3 SRO doub 290 n y 
CZ3 CH2 SRO sing 291 n y 
CH2 CZ2 SRO doub 292 n y 
CH2 HH2 SRO sing 293 n n 
CZ2 CE2 SRO sing 294 n y 
CZ2 HZ2 SRO sing 295 n n 
CE2 NE1 SRO sing 296 n y 
CE2 CD2 SRO doub 297 n y 
NE1 CD1 SRO sing 298 n y 
NE1 HNE1 SRO sing 299 n n 
CD1 CG SRO doub 300 n y 
CD1 HD1 SRO sing 301 n n 
CG CB SRO sing 302 n n 
CG CD2 SRO sing 303 n y 
CD2 CE3 SRO sing 304 n y 
CE3 HE3 SRO sing 305 n n 
CB CA SRO sing 306 n n 
CB HB1 SRO sing 307 n n 
CB HB2 SRO sing 308 n n 
CA NZ SRO sing 309 n n 
CA HA1 SRO sing 310 n n 
CA HA2 SRO sing 311 n n 
NZ HNZ1 SRO sing 312 n n 
NZ HNZ2 SRO sing 313 n n 
#
_atom_sites.entry_id                     8TGN 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SRO A 1 601 501 SRO SRO . 
D 3 YHR B 1 601 501 YHR RSP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OH SRO . . . C 2 156.662 150.65 166.918 1 72.4 ? OH SRO 601 A 1 
HETATM 2 C CZ3 SRO . . . C 2 156.021 151.367 165.899 1 66.55 ? CZ3 SRO 601 A 1 
HETATM 3 C CH2 SRO . . . C 2 156.597 152.611 165.694 1 68.72 ? CH2 SRO 601 A 1 
HETATM 4 C CZ2 SRO . . . C 2 156.089 153.458 164.723 1 69.04 ? CZ2 SRO 601 A 1 
HETATM 5 C CE2 SRO . . . C 2 154.993 153.058 163.945 1 67.64 ? CE2 SRO 601 A 1 
HETATM 6 N NE1 SRO . . . C 2 154.307 153.686 162.938 1 67.13 ? NE1 SRO 601 A 1 
HETATM 7 C CD1 SRO . . . C 2 153.322 152.856 162.517 1 69.66 ? CD1 SRO 601 A 1 
HETATM 8 C CG SRO . . . C 2 153.391 151.706 163.266 1 69.41 ? CG SRO 601 A 1 
HETATM 9 C CD2 SRO . . . C 2 154.425 151.834 164.146 1 70.93 ? CD2 SRO 601 A 1 
HETATM 10 C CE3 SRO . . . C 2 154.938 150.973 165.131 1 68.12 ? CE3 SRO 601 A 1 
HETATM 11 C CB SRO . . . C 2 152.378 150.603 162.982 1 65.44 ? CB SRO 601 A 1 
HETATM 12 C CA SRO . . . C 2 150.976 151.161 163.195 1 64.97 ? CA SRO 601 A 1 
HETATM 13 N NZ SRO . . . C 2 150.075 150.079 163.537 1 69.61 ? NZ SRO 601 A 1 
HETATM 14 H HOH SRO . . . C 2 157.325 151.185 167.322 1 69.14 ? HOH SRO 601 A 1 
HETATM 15 H HH2 SRO . . . C 2 157.444 152.927 166.29 1 68.97 ? HH2 SRO 601 A 1 
HETATM 16 H HZ2 SRO . . . C 2 156.541 154.429 164.563 1 69.18 ? HZ2 SRO 601 A 1 
HETATM 17 H HNE1 SRO . . . C 2 154.502 154.599 162.576 1 68.02 ? HNE1 SRO 601 A 1 
HETATM 18 H HD1 SRO . . . C 2 152.605 153.064 161.732 1 68.56 ? HD1 SRO 601 A 1 
HETATM 19 H HE3 SRO . . . C 2 154.487 150.002 165.29 1 68.76 ? HE3 SRO 601 A 1 
HETATM 20 H HB1 SRO . . . C 2 152.545 149.771 163.659 1 68.42 ? HB1 SRO 601 A 1 
HETATM 21 H HB2 SRO . . . C 2 152.485 150.265 161.957 1 67.61 ? HB2 SRO 601 A 1 
HETATM 22 H HA1 SRO . . . C 2 150.638 151.64 162.282 1 67.38 ? HA1 SRO 601 A 1 
HETATM 23 H HA2 SRO . . . C 2 150.994 151.886 164.002 1 67.65 ? HA2 SRO 601 A 1 
HETATM 24 H HNZ1 SRO . . . C 2 149.823 150.151 164.505 1 68.76 ? HNZ1 SRO 601 A 1 
HETATM 25 H HNZ2 SRO . . . C 2 149.248 150.143 162.972 1 68.19 ? HNZ2 SRO 601 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           25 
#