data_8TGP # _model_server_result.job_id '_bFFkC9GDtEyo7hoHDWklg' _model_server_result.datetime_utc '2025-08-04 20:06:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tgp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 8TGP # _exptl.entry_id 8TGP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.89 _cell.angle_gamma 90 _cell.entry_id 8TGP _cell.length_a 37.138 _cell.length_b 76.995 _cell.length_c 56.005 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TGP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B NZ LYS 9 B LYS 16 1_555 D C1 MYR . B MYR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.489 ? metalc ? metalc1 A SG CYS 162 A CYS 195 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc2 A SG CYS 167 A CYS 200 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc3 A SG CYS 188 A CYS 221 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc4 A SG CYS 191 A CYS 224 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 237 n n C1 O2 MYR sing 238 n n C1 C2 MYR sing 239 n n O2 HO2 MYR sing 240 n n C2 C3 MYR sing 241 n n C2 H21 MYR sing 242 n n C2 H22 MYR sing 243 n n C3 C4 MYR sing 244 n n C3 H31 MYR sing 245 n n C3 H32 MYR sing 246 n n C4 C5 MYR sing 247 n n C4 H41 MYR sing 248 n n C4 H42 MYR sing 249 n n C5 C6 MYR sing 250 n n C5 H51 MYR sing 251 n n C5 H52 MYR sing 252 n n C6 C7 MYR sing 253 n n C6 H61 MYR sing 254 n n C6 H62 MYR sing 255 n n C7 C8 MYR sing 256 n n C7 H71 MYR sing 257 n n C7 H72 MYR sing 258 n n C8 C9 MYR sing 259 n n C8 H81 MYR sing 260 n n C8 H82 MYR sing 261 n n C9 C10 MYR sing 262 n n C9 H91 MYR sing 263 n n C9 H92 MYR sing 264 n n C10 C11 MYR sing 265 n n C10 H101 MYR sing 266 n n C10 H102 MYR sing 267 n n C11 C12 MYR sing 268 n n C11 H111 MYR sing 269 n n C11 H112 MYR sing 270 n n C12 C13 MYR sing 271 n n C12 H121 MYR sing 272 n n C12 H122 MYR sing 273 n n C13 C14 MYR sing 274 n n C13 H131 MYR sing 275 n n C13 H132 MYR sing 276 n n C14 H141 MYR sing 277 n n C14 H142 MYR sing 278 n n C14 H143 MYR sing 279 n n # _atom_sites.entry_id 8TGP _atom_sites.fract_transf_matrix[1][1] 0.026927 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003732 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012988 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018026 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 401 200 ZN ZN . D 4 MYR B 1 101 116 MYR MYR . E 5 HOH A 1 501 37 HOH HOH . E 5 HOH A 2 502 49 HOH HOH . E 5 HOH A 3 503 79 HOH HOH . E 5 HOH A 4 504 43 HOH HOH . E 5 HOH A 5 505 23 HOH HOH . E 5 HOH A 6 506 50 HOH HOH . E 5 HOH A 7 507 18 HOH HOH . E 5 HOH A 8 508 75 HOH HOH . E 5 HOH A 9 509 1 HOH HOH . E 5 HOH A 10 510 9 HOH HOH . E 5 HOH A 11 511 17 HOH HOH . E 5 HOH A 12 512 83 HOH HOH . E 5 HOH A 13 513 69 HOH HOH . E 5 HOH A 14 514 4 HOH HOH . E 5 HOH A 15 515 31 HOH HOH . E 5 HOH A 16 516 74 HOH HOH . E 5 HOH A 17 517 57 HOH HOH . E 5 HOH A 18 518 34 HOH HOH . E 5 HOH A 19 519 82 HOH HOH . E 5 HOH A 20 520 73 HOH HOH . E 5 HOH A 21 521 21 HOH HOH . E 5 HOH A 22 522 22 HOH HOH . E 5 HOH A 23 523 36 HOH HOH . E 5 HOH A 24 524 7 HOH HOH . E 5 HOH A 25 525 54 HOH HOH . E 5 HOH A 26 526 53 HOH HOH . E 5 HOH A 27 527 33 HOH HOH . E 5 HOH A 28 528 42 HOH HOH . E 5 HOH A 29 529 30 HOH HOH . E 5 HOH A 30 530 12 HOH HOH . E 5 HOH A 31 531 77 HOH HOH . E 5 HOH A 32 532 26 HOH HOH . E 5 HOH A 33 533 28 HOH HOH . E 5 HOH A 34 534 11 HOH HOH . E 5 HOH A 35 535 27 HOH HOH . E 5 HOH A 36 536 20 HOH HOH . E 5 HOH A 37 537 61 HOH HOH . E 5 HOH A 38 538 13 HOH HOH . E 5 HOH A 39 539 6 HOH HOH . E 5 HOH A 40 540 5 HOH HOH . E 5 HOH A 41 541 24 HOH HOH . E 5 HOH A 42 542 41 HOH HOH . E 5 HOH A 43 543 45 HOH HOH . E 5 HOH A 44 544 14 HOH HOH . E 5 HOH A 45 545 71 HOH HOH . E 5 HOH A 46 546 44 HOH HOH . E 5 HOH A 47 547 81 HOH HOH . E 5 HOH A 48 548 58 HOH HOH . E 5 HOH A 49 549 29 HOH HOH . E 5 HOH A 50 550 35 HOH HOH . E 5 HOH A 51 551 64 HOH HOH . E 5 HOH A 52 552 66 HOH HOH . E 5 HOH A 53 553 59 HOH HOH . E 5 HOH A 54 554 48 HOH HOH . E 5 HOH A 55 555 16 HOH HOH . E 5 HOH A 56 556 52 HOH HOH . E 5 HOH A 57 557 63 HOH HOH . E 5 HOH A 58 558 60 HOH HOH . E 5 HOH A 59 559 19 HOH HOH . E 5 HOH A 60 560 78 HOH HOH . E 5 HOH A 61 561 15 HOH HOH . E 5 HOH A 62 562 51 HOH HOH . E 5 HOH A 63 563 10 HOH HOH . E 5 HOH A 64 564 8 HOH HOH . E 5 HOH A 65 565 32 HOH HOH . E 5 HOH A 66 566 3 HOH HOH . E 5 HOH A 67 567 55 HOH HOH . E 5 HOH A 68 568 65 HOH HOH . E 5 HOH A 69 569 80 HOH HOH . E 5 HOH A 70 570 39 HOH HOH . E 5 HOH A 71 571 40 HOH HOH . E 5 HOH A 72 572 67 HOH HOH . E 5 HOH A 73 573 46 HOH HOH . E 5 HOH A 74 574 62 HOH HOH . E 5 HOH A 75 575 56 HOH HOH . E 5 HOH A 76 576 76 HOH HOH . E 5 HOH A 77 577 72 HOH HOH . F 5 HOH B 1 201 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . D 4 -11.564 -12.253 -16.479 1 32.47 ? C1 MYR 101 B 1 HETATM 2 O O1 MYR . . . D 4 -12.163 -12.664 -15.536 1 30.98 ? O1 MYR 101 B 1 HETATM 3 C C2 MYR . . . D 4 -11.611 -10.784 -16.891 1 31.73 ? C2 MYR 101 B 1 HETATM 4 C C3 MYR . . . D 4 -13.008 -10.33 -17.332 1 38.58 ? C3 MYR 101 B 1 HETATM 5 C C4 MYR . . . D 4 -13.009 -8.876 -17.813 1 35.12 ? C4 MYR 101 B 1 HETATM 6 C C5 MYR . . . D 4 -14.413 -8.285 -17.892 1 39.39 ? C5 MYR 101 B 1 HETATM 7 C C6 MYR . . . D 4 -14.451 -7.015 -18.733 1 39.62 ? C6 MYR 101 B 1 HETATM 8 C C7 MYR . . . D 4 -15.693 -6.169 -18.471 1 39.58 ? C7 MYR 101 B 1 HETATM 9 C C8 MYR . . . D 4 -15.481 -4.748 -18.986 1 33.36 ? C8 MYR 101 B 1 HETATM 10 C C9 MYR . . . D 4 -15.917 -3.679 -17.986 1 39.03 ? C9 MYR 101 B 1 HETATM 11 C C10 MYR . . . D 4 -14.753 -3.234 -17.102 1 39.6 ? C10 MYR 101 B 1 HETATM 12 C C11 MYR . . . D 4 -14.55 -1.719 -17.062 1 32.4 ? C11 MYR 101 B 1 HETATM 13 C C12 MYR . . . D 4 -13.965 -1.266 -15.727 1 37.07 ? C12 MYR 101 B 1 HETATM 14 C C13 MYR . . . D 4 -12.441 -1.316 -15.684 1 38.99 ? C13 MYR 101 B 1 HETATM 15 C C14 MYR . . . D 4 -11.803 0.041 -15.411 1 33.28 ? C14 MYR 101 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #