data_8TGY
#
_model_server_result.job_id            8BzYKR339BpVc_QEkJPrQA 
_model_server_result.datetime_utc      '2024-11-26 02:34:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8tgy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":201}' 
#
_entry.id    8TGY 
#
_exptl.entry_id    8TGY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              102.095 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-(diaminomethylidene)urea 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         86.77 
_cell.angle_beta          90.01 
_cell.angle_gamma         70.26 
_cell.entry_id            8TGY 
_cell.length_a            49.914 
_cell.length_b            74.371 
_cell.length_c            107.212 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8TGY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
? tetrameric 4 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,G,I,J,M,N,O,R,S,V,X 1 1 
C,D,F,H,K,L,P,Q,T,U,W,Y 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 N4 O' 
_chem_comp.formula_weight    102.095 
_chem_comp.id                9U1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-(diaminomethylidene)urea 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O4 C3 9U1 doub 1 n n 
N5 C3 9U1 sing 2 n n 
C3 N2 9U1 sing 3 n n 
N2 C1 9U1 doub 4 n n 
N7 C1 9U1 sing 5 n n 
C1 N6 9U1 sing 6 n n 
N5 H2 9U1 sing 7 n n 
N5 H3 9U1 sing 8 n n 
N6 H4 9U1 sing 9 n n 
N6 H5 9U1 sing 10 n n 
N7 H6 9U1 sing 11 n n 
N7 H1 9U1 sing 12 n n 
#
_atom_sites.entry_id                     8TGY 
_atom_sites.fract_transf_matrix[1][1]    0.020034 
_atom_sites.fract_transf_matrix[1][2]    -0.007189 
_atom_sites.fract_transf_matrix[1][3]    0.000436 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014286 
_atom_sites.fract_transf_matrix[2][3]    -0.000859 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009344 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 9U1 E 1 201 201 9U1 LIG . 
J 4 LDA E 1 202 201 LDA LDA . 
K 4 LDA B 1 601 601 LDA LDA . 
L 4 LDA B 1 602 201 LDA LDA . 
M 5 DMU C 1 501 501 DMU DMU . 
N 4 LDA C 1 502 201 LDA LDA . 
O 4 LDA C 1 503 301 LDA LDA . 
P 5 DMU D 1 101 103 DMU DMU . 
Q 4 LDA D 1 102 101 LDA LDA . 
R 6 HOH A 1 201 9 HOH HOH . 
R 6 HOH A 2 202 27 HOH HOH . 
R 6 HOH A 3 203 48 HOH HOH . 
R 6 HOH A 4 204 37 HOH HOH . 
S 6 HOH E 1 301 1 HOH HOH . 
S 6 HOH E 2 302 30 HOH HOH . 
S 6 HOH E 3 303 26 HOH HOH . 
T 6 HOH G 1 201 39 HOH HOH . 
T 6 HOH G 2 202 43 HOH HOH . 
T 6 HOH G 3 203 41 HOH HOH . 
U 6 HOH B 1 701 4 HOH HOH . 
V 6 HOH C 1 601 11 HOH HOH . 
V 6 HOH C 2 602 20 HOH HOH . 
V 6 HOH C 3 603 31 HOH HOH . 
V 6 HOH C 4 604 7 HOH HOH . 
V 6 HOH C 5 605 22 HOH HOH . 
V 6 HOH C 6 606 19 HOH HOH . 
V 6 HOH C 7 607 24 HOH HOH . 
W 6 HOH D 1 201 2 HOH HOH . 
W 6 HOH D 2 202 44 HOH HOH . 
W 6 HOH D 3 203 18 HOH HOH . 
W 6 HOH D 4 204 34 HOH HOH . 
W 6 HOH D 5 205 36 HOH HOH . 
W 6 HOH D 6 206 40 HOH HOH . 
X 6 HOH F 1 101 25 HOH HOH . 
Y 6 HOH H 1 101 42 HOH HOH . 
Y 6 HOH H 2 102 46 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 9U1 . . . I 3 29.133 -10.182 34.544 1 44.7 ? C1 9U1 201 E 1 
HETATM 2 C C3 9U1 . . . I 3 30.184 -10.509 32.473 1 58.86 ? C3 9U1 201 E 1 
HETATM 3 N N2 9U1 . . . I 3 29.917 -9.7 33.573 1 58.28 ? N2 9U1 201 E 1 
HETATM 4 N N5 9U1 . . . I 3 31.48 -10.527 32.179 1 44.96 ? N5 9U1 201 E 1 
HETATM 5 N N6 9U1 . . . I 3 28.846 -9.449 35.622 1 30.71 ? N6 9U1 201 E 1 
HETATM 6 N N7 9U1 . . . I 3 28.611 -11.407 34.464 1 59.03 ? N7 9U1 201 E 1 
HETATM 7 O O4 9U1 . . . I 3 29.322 -11.136 31.846 1 54.94 ? O4 9U1 201 E 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           7 
#