data_8TGY # _model_server_result.job_id pddIW-OtGiH0qBrBEnrkbw _model_server_result.datetime_utc '2024-11-29 14:59:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tgy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":202}' # _entry.id 8TGY # _exptl.entry_id 8TGY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.402 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LAURYL DIMETHYLAMINE-N-OXIDE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 86.77 _cell.angle_beta 90.01 _cell.angle_gamma 70.26 _cell.entry_id 8TGY _cell.length_a 49.914 _cell.length_b 74.371 _cell.length_c 107.212 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TGY _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G,I,J,M,N,O,R,S,V,X 1 1 C,D,F,H,K,L,P,Q,T,U,W,Y 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 K N N ? 4 L N N ? 4 N N N ? 4 O N N ? 4 Q N N # _chem_comp.formula 'C14 H31 N O' _chem_comp.formula_weight 229.402 _chem_comp.id LDA _chem_comp.mon_nstd_flag . _chem_comp.name 'LAURYL DIMETHYLAMINE-N-OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 O1 LDA sing 261 n n N1 CM1 LDA sing 262 n n N1 CM2 LDA sing 263 n n N1 C1 LDA sing 264 n n CM1 HM11 LDA sing 265 n n CM1 HM12 LDA sing 266 n n CM1 HM13 LDA sing 267 n n CM2 HM21 LDA sing 268 n n CM2 HM22 LDA sing 269 n n CM2 HM23 LDA sing 270 n n C1 C2 LDA sing 271 n n C1 H11 LDA sing 272 n n C1 H12 LDA sing 273 n n C2 C3 LDA sing 274 n n C2 H21 LDA sing 275 n n C2 H22 LDA sing 276 n n C3 C4 LDA sing 277 n n C3 H31 LDA sing 278 n n C3 H32 LDA sing 279 n n C4 C5 LDA sing 280 n n C4 H41 LDA sing 281 n n C4 H42 LDA sing 282 n n C5 C6 LDA sing 283 n n C5 H51 LDA sing 284 n n C5 H52 LDA sing 285 n n C6 C7 LDA sing 286 n n C6 H61 LDA sing 287 n n C6 H62 LDA sing 288 n n C7 C8 LDA sing 289 n n C7 H71 LDA sing 290 n n C7 H72 LDA sing 291 n n C8 C9 LDA sing 292 n n C8 H81 LDA sing 293 n n C8 H82 LDA sing 294 n n C9 C10 LDA sing 295 n n C9 H91 LDA sing 296 n n C9 H92 LDA sing 297 n n C10 C11 LDA sing 298 n n C10 H101 LDA sing 299 n n C10 H102 LDA sing 300 n n C11 C12 LDA sing 301 n n C11 H111 LDA sing 302 n n C11 H112 LDA sing 303 n n C12 H121 LDA sing 304 n n C12 H122 LDA sing 305 n n C12 H123 LDA sing 306 n n # _atom_sites.entry_id 8TGY _atom_sites.fract_transf_matrix[1][1] 0.020034 _atom_sites.fract_transf_matrix[1][2] -0.007189 _atom_sites.fract_transf_matrix[1][3] 0.000436 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014286 _atom_sites.fract_transf_matrix[2][3] -0.000859 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009344 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 9U1 E 1 201 201 9U1 LIG . J 4 LDA E 1 202 201 LDA LDA . K 4 LDA B 1 601 601 LDA LDA . L 4 LDA B 1 602 201 LDA LDA . M 5 DMU C 1 501 501 DMU DMU . N 4 LDA C 1 502 201 LDA LDA . O 4 LDA C 1 503 301 LDA LDA . P 5 DMU D 1 101 103 DMU DMU . Q 4 LDA D 1 102 101 LDA LDA . R 6 HOH A 1 201 9 HOH HOH . R 6 HOH A 2 202 27 HOH HOH . R 6 HOH A 3 203 48 HOH HOH . R 6 HOH A 4 204 37 HOH HOH . S 6 HOH E 1 301 1 HOH HOH . S 6 HOH E 2 302 30 HOH HOH . S 6 HOH E 3 303 26 HOH HOH . T 6 HOH G 1 201 39 HOH HOH . T 6 HOH G 2 202 43 HOH HOH . T 6 HOH G 3 203 41 HOH HOH . U 6 HOH B 1 701 4 HOH HOH . V 6 HOH C 1 601 11 HOH HOH . V 6 HOH C 2 602 20 HOH HOH . V 6 HOH C 3 603 31 HOH HOH . V 6 HOH C 4 604 7 HOH HOH . V 6 HOH C 5 605 22 HOH HOH . V 6 HOH C 6 606 19 HOH HOH . V 6 HOH C 7 607 24 HOH HOH . W 6 HOH D 1 201 2 HOH HOH . W 6 HOH D 2 202 44 HOH HOH . W 6 HOH D 3 203 18 HOH HOH . W 6 HOH D 4 204 34 HOH HOH . W 6 HOH D 5 205 36 HOH HOH . W 6 HOH D 6 206 40 HOH HOH . X 6 HOH F 1 101 25 HOH HOH . Y 6 HOH H 1 101 42 HOH HOH . Y 6 HOH H 2 102 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LDA . . . J 4 38.933 -2.327 59.841 1 62.09 ? N1 LDA 202 E 1 HETATM 2 O O1 LDA . . . J 4 39.793 -1.915 60.855 1 73.44 ? O1 LDA 202 E 1 HETATM 3 C CM1 LDA . . . J 4 38.064 -1.183 59.454 1 59.12 ? CM1 LDA 202 E 1 HETATM 4 C CM2 LDA . . . J 4 39.742 -2.746 58.663 1 45.59 ? CM2 LDA 202 E 1 HETATM 5 C C1 LDA . . . J 4 38.056 -3.461 60.318 1 52.15 ? C1 LDA 202 E 1 HETATM 6 C C2 LDA . . . J 4 37.435 -3.223 61.683 1 54.96 ? C2 LDA 202 E 1 HETATM 7 C C3 LDA . . . J 4 35.909 -3.237 61.667 1 41.92 ? C3 LDA 202 E 1 HETATM 8 C C4 LDA . . . J 4 35.3 -3.298 63.063 1 40.71 ? C4 LDA 202 E 1 HETATM 9 C C5 LDA . . . J 4 33.821 -2.937 63.156 1 46.37 ? C5 LDA 202 E 1 HETATM 10 C C6 LDA . . . J 4 32.869 -3.949 62.532 1 50.14 ? C6 LDA 202 E 1 HETATM 11 C C7 LDA . . . J 4 31.5 -4.012 63.205 1 57.46 ? C7 LDA 202 E 1 HETATM 12 C C8 LDA . . . J 4 30.791 -2.671 63.317 1 34.45 ? C8 LDA 202 E 1 HETATM 13 C C9 LDA . . . J 4 29.381 -2.748 63.886 1 33.8 ? C9 LDA 202 E 1 HETATM 14 C C10 LDA . . . J 4 29.302 -3.217 65.326 1 43.83 ? C10 LDA 202 E 1 HETATM 15 C C11 LDA . . . J 4 27.891 -3.191 65.884 1 39.86 ? C11 LDA 202 E 1 HETATM 16 C C12 LDA . . . J 4 26.927 -4.041 65.09 1 39.7 ? C12 LDA 202 E 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #