data_8TGY # _model_server_result.job_id X_FIfII15uy7BhUeB0gcJg _model_server_result.datetime_utc '2024-11-29 14:14:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tgy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":501}' # _entry.id 8TGY # _exptl.entry_id 8TGY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.562 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DECYL-BETA-D-MALTOPYRANOSIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 86.77 _cell.angle_beta 90.01 _cell.angle_gamma 70.26 _cell.entry_id 8TGY _cell.length_a 49.914 _cell.length_b 74.371 _cell.length_c 107.212 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TGY _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G,I,J,M,N,O,R,S,V,X 1 1 C,D,F,H,K,L,P,Q,T,U,W,Y 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 M N N ? 5 P N N # _chem_comp.formula 'C22 H42 O11' _chem_comp.formula_weight 482.562 _chem_comp.id DMU _chem_comp.mon_nstd_flag . _chem_comp.name DECYL-BETA-D-MALTOPYRANOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms DECYLMALTOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C40 C37 DMU sing 95 n n C40 C43 DMU sing 96 n n C37 C34 DMU sing 97 n n C34 C31 DMU sing 98 n n C31 C28 DMU sing 99 n n C28 C25 DMU sing 100 n n C22 C25 DMU sing 101 n n C22 C19 DMU sing 102 n n O61 C57 DMU sing 103 n n O4 C7 DMU sing 104 n n C18 C19 DMU sing 105 n n C18 O16 DMU sing 106 n n O5 C6 DMU sing 107 n n O5 C4 DMU sing 108 n n C57 C4 DMU sing 109 n n C6 O16 DMU sing 110 n n C6 C1 DMU sing 111 n n C7 C5 DMU sing 112 n n C7 C8 DMU sing 113 n n C4 C3 DMU sing 114 n n O1 C10 DMU sing 115 n n O1 C9 DMU sing 116 n n C10 C5 DMU sing 117 n n C10 O7 DMU sing 118 n n C5 O3 DMU sing 119 n n O49 C1 DMU sing 120 n n C8 C9 DMU sing 121 n n C8 O2 DMU sing 122 n n C1 C2 DMU sing 123 n n C11 C9 DMU sing 124 n n C11 O6 DMU sing 125 n n C3 O7 DMU sing 126 n n C3 C2 DMU sing 127 n n C2 O55 DMU sing 128 n n C1 H1 DMU sing 129 n n C2 H2 DMU sing 130 n n C3 H3 DMU sing 131 n n C4 H4 DMU sing 132 n n C6 H5 DMU sing 133 n n C18 H6 DMU sing 134 n n C18 H7 DMU sing 135 n n C19 H8 DMU sing 136 n n C19 H9 DMU sing 137 n n C22 H10 DMU sing 138 n n C22 H11 DMU sing 139 n n C25 H12 DMU sing 140 n n C25 H13 DMU sing 141 n n C28 H14 DMU sing 142 n n C28 H15 DMU sing 143 n n C31 H16 DMU sing 144 n n C31 H17 DMU sing 145 n n C34 H18 DMU sing 146 n n C34 H19 DMU sing 147 n n C37 H20 DMU sing 148 n n C37 H21 DMU sing 149 n n C40 H22 DMU sing 150 n n C40 H23 DMU sing 151 n n C43 H24 DMU sing 152 n n C43 H25 DMU sing 153 n n C43 H26 DMU sing 154 n n O49 H27 DMU sing 155 n n O55 H28 DMU sing 156 n n C57 H29 DMU sing 157 n n C57 H30 DMU sing 158 n n O61 H31 DMU sing 159 n n C5 H32 DMU sing 160 n n C7 H33 DMU sing 161 n n C8 H34 DMU sing 162 n n C9 H35 DMU sing 163 n n C10 H36 DMU sing 164 n n O2 H37 DMU sing 165 n n O3 H38 DMU sing 166 n n O4 H39 DMU sing 167 n n C11 H40 DMU sing 168 n n C11 H41 DMU sing 169 n n O6 H42 DMU sing 170 n n # _atom_sites.entry_id 8TGY _atom_sites.fract_transf_matrix[1][1] 0.020034 _atom_sites.fract_transf_matrix[1][2] -0.007189 _atom_sites.fract_transf_matrix[1][3] 0.000436 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014286 _atom_sites.fract_transf_matrix[2][3] -0.000859 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009344 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 9U1 E 1 201 201 9U1 LIG . J 4 LDA E 1 202 201 LDA LDA . K 4 LDA B 1 601 601 LDA LDA . L 4 LDA B 1 602 201 LDA LDA . M 5 DMU C 1 501 501 DMU DMU . N 4 LDA C 1 502 201 LDA LDA . O 4 LDA C 1 503 301 LDA LDA . P 5 DMU D 1 101 103 DMU DMU . Q 4 LDA D 1 102 101 LDA LDA . R 6 HOH A 1 201 9 HOH HOH . R 6 HOH A 2 202 27 HOH HOH . R 6 HOH A 3 203 48 HOH HOH . R 6 HOH A 4 204 37 HOH HOH . S 6 HOH E 1 301 1 HOH HOH . S 6 HOH E 2 302 30 HOH HOH . S 6 HOH E 3 303 26 HOH HOH . T 6 HOH G 1 201 39 HOH HOH . T 6 HOH G 2 202 43 HOH HOH . T 6 HOH G 3 203 41 HOH HOH . U 6 HOH B 1 701 4 HOH HOH . V 6 HOH C 1 601 11 HOH HOH . V 6 HOH C 2 602 20 HOH HOH . V 6 HOH C 3 603 31 HOH HOH . V 6 HOH C 4 604 7 HOH HOH . V 6 HOH C 5 605 22 HOH HOH . V 6 HOH C 6 606 19 HOH HOH . V 6 HOH C 7 607 24 HOH HOH . W 6 HOH D 1 201 2 HOH HOH . W 6 HOH D 2 202 44 HOH HOH . W 6 HOH D 3 203 18 HOH HOH . W 6 HOH D 4 204 34 HOH HOH . W 6 HOH D 5 205 36 HOH HOH . W 6 HOH D 6 206 40 HOH HOH . X 6 HOH F 1 101 25 HOH HOH . Y 6 HOH H 1 101 42 HOH HOH . Y 6 HOH H 2 102 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DMU . . . M 5 11.155 -18.997 21.167 1 72.2 ? C1 DMU 501 C 1 HETATM 2 C C2 DMU . . . M 5 9.68 -18.977 20.879 1 79.93 ? C2 DMU 501 C 1 HETATM 3 C C3 DMU . . . M 5 9.082 -20.082 20.094 1 85.92 ? C3 DMU 501 C 1 HETATM 4 C C4 DMU . . . M 5 9.985 -21.312 19.919 1 77.29 ? C4 DMU 501 C 1 HETATM 5 O O5 DMU . . . M 5 11.337 -20.897 19.507 1 70.01 ? O5 DMU 501 C 1 HETATM 6 C C6 DMU . . . M 5 12.01 -20.112 20.544 1 70.95 ? C6 DMU 501 C 1 HETATM 7 O O7 DMU . . . M 5 7.841 -20.454 20.739 1 85.85 ? O7 DMU 501 C 1 HETATM 8 O O16 DMU . . . M 5 13.134 -19.53 19.969 1 74.06 ? O16 DMU 501 C 1 HETATM 9 C C18 DMU . . . M 5 13.906 -20.437 19.185 1 65.44 ? C18 DMU 501 C 1 HETATM 10 C C19 DMU . . . M 5 15.346 -19.845 19.007 1 65.87 ? C19 DMU 501 C 1 HETATM 11 C C22 DMU . . . M 5 15.78 -19.244 20.374 1 56.03 ? C22 DMU 501 C 1 HETATM 12 C C25 DMU . . . M 5 16.06 -17.725 20.198 1 60.3 ? C25 DMU 501 C 1 HETATM 13 C C28 DMU . . . M 5 17.601 -17.495 20.221 1 63.28 ? C28 DMU 501 C 1 HETATM 14 C C31 DMU . . . M 5 17.901 -15.981 20.076 1 52.17 ? C31 DMU 501 C 1 HETATM 15 C C34 DMU . . . M 5 19.424 -15.76 20.295 1 45.75 ? C34 DMU 501 C 1 HETATM 16 C C37 DMU . . . M 5 19.827 -14.367 19.79 1 48.11 ? C37 DMU 501 C 1 HETATM 17 C C40 DMU . . . M 5 20.442 -13.57 20.954 1 28.46 ? C40 DMU 501 C 1 HETATM 18 C C43 DMU . . . M 5 21.566 -14.383 21.593 1 41.88 ? C43 DMU 501 C 1 HETATM 19 O O49 DMU . . . M 5 11.334 -19.052 22.586 1 69.94 ? O49 DMU 501 C 1 HETATM 20 O O55 DMU . . . M 5 9.391 -17.73 20.165 1 79.38 ? O55 DMU 501 C 1 HETATM 21 C C57 DMU . . . M 5 9.467 -22.193 18.835 1 69.68 ? C57 DMU 501 C 1 HETATM 22 O O61 DMU . . . M 5 8.393 -22.956 19.302 1 67.83 ? O61 DMU 501 C 1 HETATM 23 C C5 DMU . . . M 5 5.781 -19.256 20.464 1 75.57 ? C5 DMU 501 C 1 HETATM 24 C C7 DMU . . . M 5 4.422 -19.715 20.732 1 82.15 ? C7 DMU 501 C 1 HETATM 25 C C8 DMU . . . M 5 4.011 -20.949 20.034 1 86.79 ? C8 DMU 501 C 1 HETATM 26 C C9 DMU . . . M 5 5.089 -22.059 20.195 1 85.46 ? C9 DMU 501 C 1 HETATM 27 O O1 DMU . . . M 5 6.28 -21.535 19.405 1 89.21 ? O1 DMU 501 C 1 HETATM 28 C C10 DMU . . . M 5 6.777 -20.226 19.855 1 83.84 ? C10 DMU 501 C 1 HETATM 29 O O2 DMU . . . M 5 2.784 -21.409 20.586 1 72.54 ? O2 DMU 501 C 1 HETATM 30 O O3 DMU . . . M 5 6.344 -18.752 21.735 1 88.18 ? O3 DMU 501 C 1 HETATM 31 O O4 DMU . . . M 5 3.481 -18.63 20.334 1 77.41 ? O4 DMU 501 C 1 HETATM 32 C C11 DMU . . . M 5 4.636 -23.274 19.637 1 80.55 ? C11 DMU 501 C 1 HETATM 33 O O6 DMU . . . M 5 5.67 -23.844 18.874 1 62.84 ? O6 DMU 501 C 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 33 #