data_8TH9
#
_model_server_result.job_id            gIeV_dSo7UXZRscyEYT6hA 
_model_server_result.datetime_utc      '2024-11-07 19:50:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8th9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    8TH9 
#
_exptl.entry_id    8TH9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8TH9 
_cell.length_a            121.43 
_cell.length_b            121.43 
_cell.length_c            117.695 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8TH9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        98 
_symmetry.space_group_name_Hall    'I 4bw 2bw' 
_symmetry.space_group_name_H-M     'I 41 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASN 34 A ASN 35 1_555 A N MSE 35 A MSE 36 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C ASN 34 A ASN 35 1_555 A N MSE 35 A MSE 36 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.332 ? 
covale ? covale3 A C MSE 35 A MSE 36 1_555 A N LEU 36 A LEU 37 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.328 ? 
covale ? covale4 A C MSE 35 A MSE 36 1_555 A N LEU 36 A LEU 37 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.323 ? 
covale ? covale5 A C GLU 37 A GLU 38 1_555 A N MSE 38 A MSE 39 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.326 ? 
covale ? covale6 A C GLU 37 A GLU 38 1_555 A N MSE 38 A MSE 39 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.337 ? 
covale ? covale7 A C MSE 38 A MSE 39 1_555 A N LEU 39 A LEU 40 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.334 ? 
covale ? covale8 A C MSE 38 A MSE 39 1_555 A N LEU 39 A LEU 40 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.323 ? 
covale ? covale9 A C VAL 246 A VAL 300 1_555 A N MSE 247 A MSE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale10 A C MSE 247 A MSE 301 1_555 A N LYS 248 A LYS 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale11 C O3' DA 7 D DA 7 1_555 C P 3DR 8 D 3DR 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.591 ? 
covale ? covale12 C O3' 3DR 8 D 3DR 8 1_555 C P DG 9 D DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.596 ? 
metalc ? metalc1 A SG CYS 240 A CYS 294 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc2 A ND1 HIS 244 A HIS 298 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc3 A SG CYS 264 A CYS 318 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc4 A SG CYS 267 A CYS 321 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
hydrog WATSON-CRICK hydrog1 B N1 DG 1 C DG 1 1_555 C N3 DC 14 D DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 B N2 DG 1 C DG 1 1_555 C O2 DC 14 D DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 B O6 DG 1 C DG 1 1_555 C N4 DC 14 D DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 B N3 DT 2 C DT 2 1_555 C N1 DA 13 D DA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 B O4 DT 2 C DT 2 1_555 C N6 DA 13 D DA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 B N1 DA 3 C DA 3 1_555 C N3 DT 12 D DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 B N6 DA 3 C DA 3 1_555 C O4 DT 12 D DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 B N1 DG 4 C DG 4 1_555 C N3 DC 11 D DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 B N2 DG 4 C DG 4 1_555 C O2 DC 11 D DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 B O6 DG 4 C DG 4 1_555 C N4 DC 11 D DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 B N1 DA 5 C DA 5 1_555 C N3 DT 10 D DT 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 B N6 DA 5 C DA 5 1_555 C O4 DT 10 D DT 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 B N3 DC 6 C DC 6 1_555 C N1 DG 9 D DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 B N4 DC 6 C DC 6 1_555 C O6 DG 9 D DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 B O2 DC 6 C DC 6 1_555 C N2 DG 9 D DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 B N3 DT 8 C DT 8 1_555 C N1 DA 7 D DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 B O4 DT 8 C DT 8 1_555 C N6 DA 7 D DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 B N1 DG 9 C DG 9 1_555 C N3 DC 6 D DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 B N2 DG 9 C DG 9 1_555 C O2 DC 6 D DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog20 B O6 DG 9 C DG 9 1_555 C N4 DC 6 D DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog21 B N1 DG 10 C DG 10 1_555 C N3 DC 5 D DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog22 B N2 DG 10 C DG 10 1_555 C O2 DC 5 D DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog23 B O6 DG 10 C DG 10 1_555 C N4 DC 5 D DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog24 B N1 DA 11 C DA 11 1_555 C N3 DT 4 D DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog25 B N6 DA 11 C DA 11 1_555 C O4 DT 4 D DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog26 B N3 DC 12 C DC 12 1_555 C N1 DG 3 D DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog27 B N4 DC 12 C DC 12 1_555 C O6 DG 3 D DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog28 B O2 DC 12 C DC 12 1_555 C N2 DG 3 D DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog29 B N1 DG 13 C DG 13 1_555 C N3 DC 2 D DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog30 B N2 DG 13 C DG 13 1_555 C O2 DC 2 D DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog31 B O6 DG 13 C DG 13 1_555 C N4 DC 2 D DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8TH9 
_atom_sites.fract_transf_matrix[1][1]    0.008235 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008235 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008497 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 ZN A 1 401 401 ZN ZN . 
E 5 DMS A 1 402 501 DMS DMS . 
F 6 HOH A 1 501 11 HOH HOH . 
F 6 HOH A 2 502 52 HOH HOH . 
F 6 HOH A 3 503 26 HOH HOH . 
F 6 HOH A 4 504 51 HOH HOH . 
F 6 HOH A 5 505 14 HOH HOH . 
F 6 HOH A 6 506 53 HOH HOH . 
F 6 HOH A 7 507 15 HOH HOH . 
F 6 HOH A 8 508 56 HOH HOH . 
F 6 HOH A 9 509 6 HOH HOH . 
F 6 HOH A 10 510 50 HOH HOH . 
F 6 HOH A 11 511 19 HOH HOH . 
F 6 HOH A 12 512 1 HOH HOH . 
F 6 HOH A 13 513 27 HOH HOH . 
F 6 HOH A 14 514 13 HOH HOH . 
F 6 HOH A 15 515 24 HOH HOH . 
F 6 HOH A 16 516 32 HOH HOH . 
F 6 HOH A 17 517 57 HOH HOH . 
F 6 HOH A 18 518 25 HOH HOH . 
F 6 HOH A 19 519 43 HOH HOH . 
F 6 HOH A 20 520 4 HOH HOH . 
F 6 HOH A 21 521 16 HOH HOH . 
F 6 HOH A 22 522 30 HOH HOH . 
F 6 HOH A 23 523 3 HOH HOH . 
F 6 HOH A 24 524 54 HOH HOH . 
F 6 HOH A 25 525 5 HOH HOH . 
F 6 HOH A 26 526 18 HOH HOH . 
F 6 HOH A 27 527 39 HOH HOH . 
F 6 HOH A 28 528 55 HOH HOH . 
F 6 HOH A 29 529 47 HOH HOH . 
F 6 HOH A 30 530 49 HOH HOH . 
F 6 HOH A 31 531 38 HOH HOH . 
F 6 HOH A 32 532 48 HOH HOH . 
G 6 HOH C 1 101 35 HOH HOH . 
G 6 HOH C 2 102 20 HOH HOH . 
G 6 HOH C 3 103 12 HOH HOH . 
G 6 HOH C 4 104 7 HOH HOH . 
G 6 HOH C 5 105 42 HOH HOH . 
G 6 HOH C 6 106 31 HOH HOH . 
G 6 HOH C 7 107 10 HOH HOH . 
G 6 HOH C 8 108 21 HOH HOH . 
G 6 HOH C 9 109 8 HOH HOH . 
G 6 HOH C 10 110 46 HOH HOH . 
G 6 HOH C 11 111 36 HOH HOH . 
G 6 HOH C 12 112 17 HOH HOH . 
G 6 HOH C 13 113 40 HOH HOH . 
G 6 HOH C 14 114 33 HOH HOH . 
G 6 HOH C 15 115 34 HOH HOH . 
G 6 HOH C 16 116 45 HOH HOH . 
H 6 HOH D 1 101 59 HOH HOH . 
H 6 HOH D 2 102 23 HOH HOH . 
H 6 HOH D 3 103 9 HOH HOH . 
H 6 HOH D 4 104 37 HOH HOH . 
H 6 HOH D 5 105 2 HOH HOH . 
H 6 HOH D 6 106 44 HOH HOH . 
H 6 HOH D 7 107 22 HOH HOH . 
H 6 HOH D 8 108 58 HOH HOH . 
H 6 HOH D 9 109 28 HOH HOH . 
H 6 HOH D 10 110 41 HOH HOH . 
H 6 HOH D 11 111 29 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               80.156 
_atom_site.Cartn_y               10.072 
_atom_site.Cartn_z               39.773 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        70.43 
_atom_site.pdbx_formal_charge    2 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#