data_8THK # _model_server_result.job_id 0Wlh82ADcp4q1YohTA_VSw _model_server_result.datetime_utc '2024-12-26 14:10:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8thk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 8THK # _exptl.entry_id 8THK _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 309.384 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(5S)-5-(4,5-dihydro-1H-imidazol-2-yl)-2-hydroxy-5,6,7,8-tetrahydronaphthalen-1-yl]methanesulfonamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8THK _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8THK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 22 F CYS 22 1_555 D SG CYS 96 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 D SG CYS 159 F CYS 147 1_555 D SG CYS 229 F CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 E SG CYS 272 R CYS 99 1_555 E SG CYS 349 R CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C14 H19 N3 O3 S' _chem_comp.formula_weight 309.384 _chem_comp.id CGZ _chem_comp.mon_nstd_flag . _chem_comp.name N-[(5S)-5-(4,5-dihydro-1H-imidazol-2-yl)-2-hydroxy-5,6,7,8-tetrahydronaphthalen-1-yl]methanesulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 N2 CGZ sing 70 n n C8 C7 CGZ sing 71 n n N2 C6 CGZ sing 72 n n C7 N1 CGZ sing 73 n n C13 C12 CGZ doub 74 n y C13 C CGZ sing 75 n y C12 C4 CGZ sing 76 n y C6 N1 CGZ doub 77 n n C6 C5 CGZ sing 78 n n C O CGZ sing 79 n n C C1 CGZ doub 80 n y C4 C5 CGZ sing 81 n n C4 C3 CGZ doub 82 n y C5 C9 CGZ sing 83 n n C9 C10 CGZ sing 84 n n C1 C3 CGZ sing 85 n y C1 N CGZ sing 86 n n C3 C11 CGZ sing 87 n n C10 C11 CGZ sing 88 n n N S CGZ sing 89 n n S C2 CGZ sing 90 n n S O2 CGZ doub 91 n n S O1 CGZ doub 92 n n C5 H3 CGZ sing 93 n n C7 H5 CGZ sing 94 n n C7 H6 CGZ sing 95 n n C8 H7 CGZ sing 96 n n C8 H8 CGZ sing 97 n n C10 H9 CGZ sing 98 n n C10 H10 CGZ sing 99 n n C13 H11 CGZ sing 100 n n N2 H12 CGZ sing 101 n n C9 H14 CGZ sing 102 n n C9 H15 CGZ sing 103 n n C2 H16 CGZ sing 104 n n C2 H17 CGZ sing 105 n n C2 H18 CGZ sing 106 n n N H19 CGZ sing 107 n n O H20 CGZ sing 108 n n C11 H21 CGZ sing 109 n n C11 H22 CGZ sing 110 n n C12 H23 CGZ sing 111 n n # _atom_sites.entry_id 8THK _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id F _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id CGZ _pdbx_nonpoly_scheme.pdb_strand_id R _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 401 _pdbx_nonpoly_scheme.pdb_mon_id CGZ _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 CGZ . . . F 6 145.188 138.628 164.2 1 46.01 ? N1 CGZ 401 R 1 HETATM 2 C C4 CGZ . . . F 6 142.978 140.944 164.976 1 43.78 ? C4 CGZ 401 R 1 HETATM 3 C C5 CGZ . . . F 6 144.463 140.753 165.163 1 49.91 ? C5 CGZ 401 R 1 HETATM 4 C C6 CGZ . . . F 6 145.099 139.9 164.094 1 48.27 ? C6 CGZ 401 R 1 HETATM 5 C C7 CGZ . . . F 6 145.869 138.149 162.988 1 49.53 ? C7 CGZ 401 R 1 HETATM 6 C C8 CGZ . . . F 6 146.377 139.413 162.285 1 52.14 ? C8 CGZ 401 R 1 HETATM 7 C C10 CGZ . . . F 6 144.571 142.79 166.599 1 50.8 ? C10 CGZ 401 R 1 HETATM 8 C C13 CGZ . . . F 6 140.88 140.235 164.008 1 42.87 ? C13 CGZ 401 R 1 HETATM 9 N N2 CGZ . . . F 6 145.618 140.446 162.972 1 47.15 ? N2 CGZ 401 R 1 HETATM 10 C C9 CGZ . . . F 6 145.072 142.137 165.316 1 46.64 ? C9 CGZ 401 R 1 HETATM 11 O O1 CGZ . . . F 6 140.865 142.948 169.06 1 58.96 ? O1 CGZ 401 R 1 HETATM 12 C C1 CGZ . . . F 6 140.901 141.883 165.742 1 42.84 ? C1 CGZ 401 R 1 HETATM 13 C C3 CGZ . . . F 6 142.301 141.862 165.789 1 41.18 ? C3 CGZ 401 R 1 HETATM 14 C C2 CGZ . . . F 6 140.578 140.489 168.316 1 48.43 ? C2 CGZ 401 R 1 HETATM 15 N N CGZ . . . F 6 140.182 142.64 166.714 1 50.22 ? N CGZ 401 R 1 HETATM 16 C C CGZ . . . F 6 140.179 141.093 164.843 1 44.52 ? C CGZ 401 R 1 HETATM 17 O O CGZ . . . F 6 138.87 140.867 165.122 1 41.32 ? O CGZ 401 R 1 HETATM 18 C C11 CGZ . . . F 6 143.043 142.886 166.62 1 48.02 ? C11 CGZ 401 R 1 HETATM 19 C C12 CGZ . . . F 6 142.258 140.156 164.083 1 40.96 ? C12 CGZ 401 R 1 HETATM 20 O O2 CGZ . . . F 6 138.6 142.136 168.538 1 57.5 ? O2 CGZ 401 R 1 HETATM 21 S S CGZ . . . F 6 140.002 142.141 168.256 1 72.88 ? S CGZ 401 R 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 21 #