data_8TJ6 # _model_server_result.job_id YOIs00u0sXnk4rLvtGR4ig _model_server_result.datetime_utc '2024-10-17 11:26:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tj6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Z","auth_seq_id":401}' # _entry.id 8TJ6 # _exptl.entry_id 8TJ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 9 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8TJ6 _cell.length_a 100.224 _cell.length_b 100.224 _cell.length_c 689.207 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TJ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? hexameric 6 author_defined_assembly 1 ? hexameric 6 author_defined_assembly 2 ? hexameric 6 author_defined_assembly 3 ? hexameric 6 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,K,T,X,Y,KA,LA 1 1 A,B,I,J,K,T,X,Y,KA,LA 1 2 A,B,I,J,K,T,X,Y,KA,LA 1 5 C,D,L,M,N,U,Z,AA,BA,MA,NA 2 1 C,D,L,M,N,U,Z,AA,BA,MA,NA 2 3 C,D,L,M,N,U,Z,AA,BA,MA,NA 2 6 E,F,O,P,V,CA,DA,EA,FA,OA,PA 3 1 E,F,O,P,V,CA,DA,EA,FA,OA,PA 3 4 E,F,O,P,V,CA,DA,EA,FA,OA,PA 3 7 G,H,Q,R,S,W,GA,HA,IA,JA,QA,RA 4 1 G,H,Q,R,S,W,GA,HA,IA,JA,QA,RA 4 2 G,H,Q,R,S,W,GA,HA,IA,JA,QA,RA 4 5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_675 -y+1,x-y+2,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 173.59306 0 3 'crystal symmetry operation' 2_785 -y+2,x-y+3,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 50.112 260.38959 0 4 'crystal symmetry operation' 2_685 -y+1,x-y+3,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -50.112 260.38959 0 5 'crystal symmetry operation' 3_465 -x+y-1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -150.336 86.79653 0 6 'crystal symmetry operation' 3_475 -x+y-1,-x+2,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -200.448 173.59306 0 7 'crystal symmetry operation' 3_365 -x+y-2,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -250.56 86.79653 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 X N N ? 9 Y N N ? 9 Z N N ? 9 AA N N ? 9 BA N N ? 9 CA N N ? 9 DA N N ? 9 EA N N ? 9 FA N N ? 9 GA N N ? 9 HA N N ? 9 IA N N ? 9 JA N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide 5 oligosaccharide 6 oligosaccharide 7 oligosaccharide 8 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 3 4 3 MAN BMA C1 O1 . O3 HO3 . sing 4 ? 3 5 3 MAN BMA C1 O1 . O6 HO6 . sing 5 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 6 ? 5 2 1 NAG NAG C1 O1 . O4 HO4 . sing 7 ? 5 3 1 FUC NAG C1 O1 . O6 HO6 . sing 8 ? 6 2 1 NAG NAG C1 O1 . O4 HO4 . sing 9 ? 6 3 2 BMA NAG C1 O1 . O4 HO4 . sing 10 ? 6 4 1 FUC NAG C1 O1 . O6 HO6 . sing 11 ? 7 2 1 SIA GAL C2 O2 . O6 HO6 . sing 12 ? 8 2 1 GAL NAG C1 O1 . O4 HO4 . sing 13 ? 8 3 2 SIA GAL C2 O2 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n I NAG 1 I 1 NAG I 1 NAG 3 n I NAG 2 I 2 NAG I 2 NAG 3 n I BMA 3 I 3 BMA I 3 BMA 3 n I MAN 4 I 4 MAN I 4 MAN 3 n I MAN 5 I 5 MAN I 5 MAN 4 n J NAG 1 J 1 NAG J 1 NAG 4 n J NAG 2 J 2 NAG J 2 NAG 5 n K NAG 1 K 1 NAG K 1 NAG 5 n K NAG 2 K 2 NAG K 2 NAG 5 n K FUC 3 K 3 FUC K 3 FUC 3 n L NAG 1 L 1 NAG L 1 NAG 3 n L NAG 2 L 2 NAG L 2 NAG 3 n L BMA 3 L 3 BMA L 3 BMA 3 n L MAN 4 L 4 MAN L 4 MAN 3 n L MAN 5 L 5 MAN L 5 MAN 6 n M NAG 1 M 1 NAG M 1 NAG 6 n M NAG 2 M 2 NAG M 2 NAG 6 n M BMA 3 M 3 BMA M 3 BMA 6 n M FUC 4 M 4 FUC M 4 FUC 4 n N NAG 1 N 1 NAG N 1 NAG 4 n N NAG 2 N 2 NAG N 2 NAG 5 n O NAG 1 O 1 NAG O 1 NAG 5 n O NAG 2 O 2 NAG O 2 NAG 5 n O FUC 3 O 3 FUC O 3 FUC 3 n P NAG 1 P 1 NAG P 1 NAG 3 n P NAG 2 P 2 NAG P 2 NAG 3 n P BMA 3 P 3 BMA P 3 BMA 3 n P MAN 4 P 4 MAN P 4 MAN 3 n P MAN 5 P 5 MAN P 5 MAN 4 n Q NAG 1 Q 1 NAG Q 1 NAG 4 n Q NAG 2 Q 2 NAG Q 2 NAG 3 n R NAG 1 R 1 NAG R 1 NAG 3 n R NAG 2 R 2 NAG R 2 NAG 3 n R BMA 3 R 3 BMA R 3 BMA 3 n R MAN 4 R 4 MAN R 4 MAN 3 n R MAN 5 R 5 MAN R 5 MAN 4 n S NAG 1 S 1 NAG S 1 NAG 4 n S NAG 2 S 2 NAG S 2 NAG 7 n T GAL 1 T 1 GAL T 1 GAL 7 n T SIA 2 T 2 SIA T 2 SIA 8 n U NAG 1 U 1 NAG U 1 NAG 8 n U GAL 2 U 2 GAL U 2 GAL 8 n U SIA 3 U 3 SIA U 3 SIA 8 n V NAG 1 V 1 NAG V 1 NAG 8 n V GAL 2 V 2 GAL V 2 GAL 8 n V SIA 3 V 3 SIA V 3 SIA 8 n W NAG 1 W 1 NAG W 1 NAG 8 n W GAL 2 W 2 GAL W 2 GAL 8 n W SIA 3 W 3 SIA W 3 SIA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 8 A CYS 14 1_555 B SG CYS 137 B CYS 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 46 A CYS 52 1_555 A SG CYS 271 A CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 58 A CYS 64 1_555 A SG CYS 70 A CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 91 A CYS 97 1_555 A SG CYS 133 A CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 A SG CYS 275 A CYS 281 1_555 A SG CYS 299 A CYS 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 B SG CYS 144 B CYS 144 1_555 B SG CYS 148 B CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 C SG CYS 8 C CYS 14 1_555 D SG CYS 137 D CYS 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf8 C SG CYS 46 C CYS 52 1_555 C SG CYS 271 C CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf9 C SG CYS 58 C CYS 64 1_555 C SG CYS 70 C CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf10 C SG CYS 91 C CYS 97 1_555 C SG CYS 133 C CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf11 C SG CYS 275 C CYS 281 1_555 C SG CYS 299 C CYS 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf12 D SG CYS 144 D CYS 144 1_555 D SG CYS 148 D CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf13 E SG CYS 8 E CYS 14 1_555 F SG CYS 137 F CYS 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf14 E SG CYS 46 E CYS 52 1_555 E SG CYS 271 E CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf15 E SG CYS 58 E CYS 64 1_555 E SG CYS 70 E CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf16 E SG CYS 91 E CYS 97 1_555 E SG CYS 133 E CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf17 E SG CYS 275 E CYS 281 1_555 E SG CYS 299 E CYS 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf18 F SG CYS 144 F CYS 144 1_555 F SG CYS 148 F CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf19 G SG CYS 8 G CYS 14 1_555 H SG CYS 137 H CYS 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf20 G SG CYS 46 G CYS 52 1_555 G SG CYS 271 G CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf21 G SG CYS 58 G CYS 64 1_555 G SG CYS 70 G CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf22 G SG CYS 91 G CYS 97 1_555 G SG CYS 133 G CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf23 G SG CYS 275 G CYS 281 1_555 G SG CYS 299 G CYS 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf24 H SG CYS 144 H CYS 144 1_555 H SG CYS 148 H CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? covale ? covale1 A ND2 ASN 32 A ASN 38 1_555 K C1 NAG . K NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 A ND2 ASN 57 A ASN 63 1_555 J C1 NAG . J NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? covale ? covale3 A ND2 ASN 120 A ASN 126 1_555 Y C1 NAG . A NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale4 A ND2 ASN 159 A ASN 165 1_555 I C1 NAG . I NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale5 A ND2 ASN 279 A ASN 285 1_555 X C1 NAG . A NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale6 C ND2 ASN 16 C ASN 22 1_555 N C1 NAG . N NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale7 C ND2 ASN 32 C ASN 38 1_555 M C1 NAG . M NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale8 C ND2 ASN 120 C ASN 126 1_555 BA C1 NAG . C NAG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale9 C ND2 ASN 159 C ASN 165 1_555 L C1 NAG . L NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale10 C ND2 ASN 279 C ASN 285 1_555 Z C1 NAG . C NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale11 E ND2 ASN 32 E ASN 38 1_555 O C1 NAG . O NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale12 E ND2 ASN 57 E ASN 63 1_555 DA C1 NAG . E NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale13 E ND2 ASN 120 E ASN 126 1_555 EA C1 NAG . E NAG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale14 E ND2 ASN 159 E ASN 165 1_555 P C1 NAG . P NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale15 E ND2 ASN 279 E ASN 285 1_555 CA C1 NAG . E NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale16 F ND2 ASN 154 F ASN 154 1_555 FA C1 NAG . F NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale17 G ND2 ASN 16 G ASN 22 1_555 IA C1 NAG . G NAG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale18 G ND2 ASN 32 G ASN 38 1_555 S C1 NAG . S NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale19 G ND2 ASN 57 G ASN 63 1_555 GA C1 NAG . G NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale20 G ND2 ASN 120 G ASN 126 1_555 HA C1 NAG . G NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale21 G ND2 ASN 159 G ASN 165 1_555 R C1 NAG . R NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale22 G ND2 ASN 279 G ASN 285 1_555 Q C1 NAG . Q NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale23 H ND2 ASN 154 H ASN 154 1_555 JA C1 NAG . H NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale24 I O4 NAG . I NAG 1 1_555 I C1 NAG . I NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale25 I O4 NAG . I NAG 2 1_555 I C1 BMA . I BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale26 I O3 BMA . I BMA 3 1_555 I C1 MAN . I MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale27 I O6 BMA . I BMA 3 1_555 I C1 MAN . I MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale28 J O4 NAG . J NAG 1 1_555 J C1 NAG . J NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale29 K O4 NAG . K NAG 1 1_555 K C1 NAG . K NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale30 K O6 NAG . K NAG 1 1_555 K C1 FUC . K FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale31 L O4 NAG . L NAG 1 1_555 L C1 NAG . L NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale32 L O4 NAG . L NAG 2 1_555 L C1 BMA . L BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale33 L O3 BMA . L BMA 3 1_555 L C1 MAN . L MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale34 L O6 BMA . L BMA 3 1_555 L C1 MAN . L MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale35 M O4 NAG . M NAG 1 1_555 M C1 NAG . M NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale36 M O6 NAG . M NAG 1 1_555 M C1 FUC . M FUC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale37 M O4 NAG . M NAG 2 1_555 M C1 BMA . M BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale38 N O4 NAG . N NAG 1 1_555 N C1 NAG . N NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale39 O O4 NAG . O NAG 1 1_555 O C1 NAG . O NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale40 O O6 NAG . O NAG 1 1_555 O C1 FUC . O FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale41 P O4 NAG . P NAG 1 1_555 P C1 NAG . P NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale42 P O4 NAG . P NAG 2 1_555 P C1 BMA . P BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale43 P O3 BMA . P BMA 3 1_555 P C1 MAN . P MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale44 P O6 BMA . P BMA 3 1_555 P C1 MAN . P MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale45 Q O4 NAG . Q NAG 1 1_555 Q C1 NAG . Q NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale46 R O4 NAG . R NAG 1 1_555 R C1 NAG . R NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale47 R O4 NAG . R NAG 2 1_555 R C1 BMA . R BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale48 R O3 BMA . R BMA 3 1_555 R C1 MAN . R MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale49 R O6 BMA . R BMA 3 1_555 R C1 MAN . R MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale50 S O4 NAG . S NAG 1 1_555 S C1 NAG . S NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale51 T O6 GAL . T GAL 1 1_555 T C2 SIA . T SIA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale52 U O4 NAG . U NAG 1 1_555 U C1 GAL . U GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale53 U O6 GAL . U GAL 2 1_555 U C2 SIA . U SIA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale54 V O4 NAG . V NAG 1 1_555 V C1 GAL . V GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.522 ? covale ? covale55 V O6 GAL . V GAL 2 1_555 V C2 SIA . V SIA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale56 W O4 NAG . W NAG 1 1_555 W C1 GAL . W GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale57 W O6 GAL . W GAL 2 1_555 W C2 SIA . W SIA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.373 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 332 n n C1 O1 NAG sing 333 n n C1 O5 NAG sing 334 n n C1 H1 NAG sing 335 n n C2 C3 NAG sing 336 n n C2 N2 NAG sing 337 n n C2 H2 NAG sing 338 n n C3 C4 NAG sing 339 n n C3 O3 NAG sing 340 n n C3 H3 NAG sing 341 n n C4 C5 NAG sing 342 n n C4 O4 NAG sing 343 n n C4 H4 NAG sing 344 n n C5 C6 NAG sing 345 n n C5 O5 NAG sing 346 n n C5 H5 NAG sing 347 n n C6 O6 NAG sing 348 n n C6 H61 NAG sing 349 n n C6 H62 NAG sing 350 n n C7 C8 NAG sing 351 n n C7 N2 NAG sing 352 n n C7 O7 NAG doub 353 n n C8 H81 NAG sing 354 n n C8 H82 NAG sing 355 n n C8 H83 NAG sing 356 n n N2 HN2 NAG sing 357 n n O1 HO1 NAG sing 358 n n O3 HO3 NAG sing 359 n n O4 HO4 NAG sing 360 n n O6 HO6 NAG sing 361 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 8TJ6 _atom_sites.fract_transf_matrix[1][1] 0.009978 _atom_sites.fract_transf_matrix[1][2] 0.005761 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011521 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001451 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code X 9 NAG A 1 401 329 NAG NAG . Y 9 NAG A 1 402 339 NAG NAG . Z 9 NAG C 1 401 329 NAG NAG . AA 9 NAG C 1 402 337 NAG NAG . BA 9 NAG C 1 403 347 NAG NAG . CA 9 NAG E 1 401 329 NAG NAG . DA 9 NAG E 1 402 337 NAG NAG . EA 9 NAG E 1 403 339 NAG NAG . FA 9 NAG F 1 201 173 NAG NAG . GA 9 NAG G 1 401 337 NAG NAG . HA 9 NAG G 1 402 339 NAG NAG . IA 9 NAG G 1 403 343 NAG NAG . JA 9 NAG H 1 201 173 NAG NAG . KA 10 HOH A 1 501 39 HOH HOH . KA 10 HOH A 2 502 3 HOH HOH . KA 10 HOH A 3 503 90 HOH HOH . KA 10 HOH A 4 504 4 HOH HOH . KA 10 HOH A 5 505 84 HOH HOH . KA 10 HOH A 6 506 2 HOH HOH . KA 10 HOH A 7 507 30 HOH HOH . KA 10 HOH A 8 508 93 HOH HOH . LA 10 HOH B 1 201 1 HOH HOH . LA 10 HOH B 2 202 92 HOH HOH . LA 10 HOH B 3 203 20 HOH HOH . LA 10 HOH B 4 204 27 HOH HOH . LA 10 HOH B 5 205 40 HOH HOH . LA 10 HOH B 6 206 19 HOH HOH . LA 10 HOH B 7 207 87 HOH HOH . LA 10 HOH B 8 208 29 HOH HOH . LA 10 HOH B 9 209 46 HOH HOH . LA 10 HOH B 10 210 47 HOH HOH . MA 10 HOH C 1 501 91 HOH HOH . MA 10 HOH C 2 502 96 HOH HOH . MA 10 HOH C 3 503 101 HOH HOH . MA 10 HOH C 4 504 102 HOH HOH . MA 10 HOH C 5 505 95 HOH HOH . MA 10 HOH C 6 506 83 HOH HOH . MA 10 HOH C 7 507 32 HOH HOH . MA 10 HOH C 8 508 110 HOH HOH . NA 10 HOH D 1 201 49 HOH HOH . NA 10 HOH D 2 202 79 HOH HOH . NA 10 HOH D 3 203 56 HOH HOH . NA 10 HOH D 4 204 35 HOH HOH . NA 10 HOH D 5 205 10 HOH HOH . NA 10 HOH D 6 206 12 HOH HOH . NA 10 HOH D 7 207 100 HOH HOH . NA 10 HOH D 8 208 36 HOH HOH . NA 10 HOH D 9 209 72 HOH HOH . NA 10 HOH D 10 210 78 HOH HOH . NA 10 HOH D 11 211 31 HOH HOH . NA 10 HOH D 12 212 80 HOH HOH . NA 10 HOH D 13 213 57 HOH HOH . NA 10 HOH D 14 214 81 HOH HOH . NA 10 HOH D 15 215 11 HOH HOH . NA 10 HOH D 16 216 13 HOH HOH . NA 10 HOH D 17 217 94 HOH HOH . NA 10 HOH D 18 218 89 HOH HOH . NA 10 HOH D 19 219 82 HOH HOH . NA 10 HOH D 20 220 48 HOH HOH . NA 10 HOH D 21 221 85 HOH HOH . NA 10 HOH D 22 222 34 HOH HOH . NA 10 HOH D 23 223 62 HOH HOH . NA 10 HOH D 24 224 50 HOH HOH . NA 10 HOH D 25 225 52 HOH HOH . NA 10 HOH D 26 226 63 HOH HOH . NA 10 HOH D 27 227 61 HOH HOH . NA 10 HOH D 28 228 51 HOH HOH . NA 10 HOH D 29 229 88 HOH HOH . NA 10 HOH D 30 230 115 HOH HOH . OA 10 HOH E 1 501 7 HOH HOH . OA 10 HOH E 2 502 60 HOH HOH . OA 10 HOH E 3 503 103 HOH HOH . OA 10 HOH E 4 504 14 HOH HOH . OA 10 HOH E 5 505 22 HOH HOH . OA 10 HOH E 6 506 109 HOH HOH . OA 10 HOH E 7 507 104 HOH HOH . OA 10 HOH E 8 508 106 HOH HOH . OA 10 HOH E 9 509 74 HOH HOH . OA 10 HOH E 10 510 68 HOH HOH . OA 10 HOH E 11 511 24 HOH HOH . OA 10 HOH E 12 512 5 HOH HOH . OA 10 HOH E 13 513 73 HOH HOH . OA 10 HOH E 14 514 25 HOH HOH . OA 10 HOH E 15 515 23 HOH HOH . OA 10 HOH E 16 516 114 HOH HOH . PA 10 HOH F 1 301 8 HOH HOH . PA 10 HOH F 2 302 55 HOH HOH . PA 10 HOH F 3 303 86 HOH HOH . PA 10 HOH F 4 304 9 HOH HOH . PA 10 HOH F 5 305 69 HOH HOH . PA 10 HOH F 6 306 15 HOH HOH . PA 10 HOH F 7 307 77 HOH HOH . PA 10 HOH F 8 308 53 HOH HOH . PA 10 HOH F 9 309 37 HOH HOH . PA 10 HOH F 10 310 16 HOH HOH . PA 10 HOH F 11 311 75 HOH HOH . PA 10 HOH F 12 312 99 HOH HOH . PA 10 HOH F 13 313 26 HOH HOH . PA 10 HOH F 14 314 44 HOH HOH . PA 10 HOH F 15 315 45 HOH HOH . PA 10 HOH F 16 316 71 HOH HOH . PA 10 HOH F 17 317 43 HOH HOH . PA 10 HOH F 18 318 111 HOH HOH . PA 10 HOH F 19 319 107 HOH HOH . PA 10 HOH F 20 320 65 HOH HOH . PA 10 HOH F 21 321 66 HOH HOH . PA 10 HOH F 22 322 112 HOH HOH . PA 10 HOH F 23 323 113 HOH HOH . PA 10 HOH F 24 324 42 HOH HOH . PA 10 HOH F 25 325 64 HOH HOH . PA 10 HOH F 26 326 28 HOH HOH . PA 10 HOH F 27 327 54 HOH HOH . PA 10 HOH F 28 328 67 HOH HOH . PA 10 HOH F 29 329 70 HOH HOH . PA 10 HOH F 30 330 41 HOH HOH . PA 10 HOH F 31 331 108 HOH HOH . QA 10 HOH G 1 501 33 HOH HOH . QA 10 HOH G 2 502 21 HOH HOH . QA 10 HOH G 3 503 105 HOH HOH . QA 10 HOH G 4 504 18 HOH HOH . RA 10 HOH H 1 301 17 HOH HOH . RA 10 HOH H 2 302 76 HOH HOH . RA 10 HOH H 3 303 38 HOH HOH . RA 10 HOH H 4 304 97 HOH HOH . RA 10 HOH H 5 305 98 HOH HOH . RA 10 HOH H 6 306 58 HOH HOH . RA 10 HOH H 7 307 6 HOH HOH . RA 10 HOH H 8 308 116 HOH HOH . RA 10 HOH H 9 309 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . Z 9 -72.674 138.992 151.968 1 84.41 ? C1 NAG 401 C 1 HETATM 2 C C2 NAG . . . Z 9 -73.398 139.995 151.058 1 84.69 ? C2 NAG 401 C 1 HETATM 3 C C3 NAG . . . Z 9 -73.077 141.434 151.47 1 81.14 ? C3 NAG 401 C 1 HETATM 4 C C4 NAG . . . Z 9 -73.291 141.638 152.963 1 90.51 ? C4 NAG 401 C 1 HETATM 5 C C5 NAG . . . Z 9 -72.521 140.582 153.743 1 89.78 ? C5 NAG 401 C 1 HETATM 6 C C6 NAG . . . Z 9 -72.727 140.668 155.237 1 87.72 ? C6 NAG 401 C 1 HETATM 7 C C7 NAG . . . Z 9 -73.811 139.127 148.793 1 89.3 ? C7 NAG 401 C 1 HETATM 8 C C8 NAG . . . Z 9 -73.265 138.992 147.403 1 82.44 ? C8 NAG 401 C 1 HETATM 9 N N2 NAG . . . Z 9 -73.032 139.774 149.667 1 83.66 ? N2 NAG 401 C 1 HETATM 10 O O3 NAG . . . Z 9 -73.914 142.328 150.746 1 85.13 ? O3 NAG 401 C 1 HETATM 11 O O4 NAG . . . Z 9 -72.839 142.933 153.343 1 99.6 ? O4 NAG 401 C 1 HETATM 12 O O5 NAG . . . Z 9 -72.964 139.282 153.335 1 91.65 ? O5 NAG 401 C 1 HETATM 13 O O6 NAG . . . Z 9 -71.573 140.23 155.94 1 94.91 ? O6 NAG 401 C 1 HETATM 14 O O7 NAG . . . Z 9 -74.906 138.673 149.108 1 97.12 ? O7 NAG 401 C 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 14 #