data_8TO3 # _model_server_result.job_id 6rpMYNe8PUBXxVSzflvYvA _model_server_result.datetime_utc '2024-11-16 08:00:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8to3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1101}' # _entry.id 8TO3 # _exptl.entry_id 8TO3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.6 _cell.angle_gamma 90 _cell.entry_id 8TO3 _cell.length_a 56.999 _cell.length_b 73.369 _cell.length_c 150.591 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TO3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,L 1 1 B,G,M 2 1 C,H,I,N 3 1 D,J,K,O 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 148 D ASN 842 1_555 E MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc2 A OD2 ASP 161 D ASP 855 1_555 E MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc3 E MG MG . D MG 1101 1_555 F O1G ANP . D ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc4 E MG MG . D MG 1101 1_555 F O1B ANP . D ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc5 E MG MG . D MG 1101 1_555 F O2A ANP . D ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc6 C OD1 ASN 148 B ASN 842 1_555 H MG MG . B MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc7 C OD2 ASP 161 B ASP 855 1_555 H MG MG . B MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc8 H MG MG . B MG 1101 1_555 I O1B ANP . B ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc9 H MG MG . B MG 1101 1_555 I O1A ANP . B ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc10 H MG MG . B MG 1101 1_555 I O2G ANP . B ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc11 D OD1 ASN 148 C ASN 842 1_555 J MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc12 D OD2 ASP 161 C ASP 855 1_555 J MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc13 J MG MG . C MG 1101 1_555 K O1G ANP . C ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc14 J MG MG . C MG 1101 1_555 K O1B ANP . C ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc15 J MG MG . C MG 1101 1_555 K O1A ANP . C ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8TO3 _atom_sites.fract_transf_matrix[1][1] 0.017544 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002967 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01363 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006735 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG D 1 1101 1 MG MG . F 3 ANP D 1 1102 1101 ANP ANP . G 4 IXC A 1 1101 1101 IXC LIG . H 2 MG B 1 1101 2 MG MG . I 3 ANP B 1 1102 1101 ANP ANP . J 2 MG C 1 1101 3 MG MG . K 3 ANP C 1 1102 1101 ANP ANP . L 5 HOH D 1 1201 155 HOH HOH . L 5 HOH D 2 1202 165 HOH HOH . L 5 HOH D 3 1203 96 HOH HOH . L 5 HOH D 4 1204 105 HOH HOH . L 5 HOH D 5 1205 157 HOH HOH . L 5 HOH D 6 1206 159 HOH HOH . L 5 HOH D 7 1207 5 HOH HOH . L 5 HOH D 8 1208 74 HOH HOH . L 5 HOH D 9 1209 3 HOH HOH . L 5 HOH D 10 1210 24 HOH HOH . L 5 HOH D 11 1211 168 HOH HOH . L 5 HOH D 12 1212 35 HOH HOH . L 5 HOH D 13 1213 167 HOH HOH . L 5 HOH D 14 1214 12 HOH HOH . L 5 HOH D 15 1215 140 HOH HOH . L 5 HOH D 16 1216 110 HOH HOH . L 5 HOH D 17 1217 95 HOH HOH . L 5 HOH D 18 1218 70 HOH HOH . L 5 HOH D 19 1219 76 HOH HOH . L 5 HOH D 20 1220 130 HOH HOH . L 5 HOH D 21 1221 176 HOH HOH . L 5 HOH D 22 1222 101 HOH HOH . L 5 HOH D 23 1223 54 HOH HOH . L 5 HOH D 24 1224 46 HOH HOH . L 5 HOH D 25 1225 128 HOH HOH . L 5 HOH D 26 1226 177 HOH HOH . L 5 HOH D 27 1227 141 HOH HOH . L 5 HOH D 28 1228 136 HOH HOH . L 5 HOH D 29 1229 91 HOH HOH . L 5 HOH D 30 1230 81 HOH HOH . L 5 HOH D 31 1231 166 HOH HOH . L 5 HOH D 32 1232 98 HOH HOH . M 5 HOH A 1 1201 161 HOH HOH . M 5 HOH A 2 1202 58 HOH HOH . M 5 HOH A 3 1203 2 HOH HOH . M 5 HOH A 4 1204 1 HOH HOH . M 5 HOH A 5 1205 44 HOH HOH . M 5 HOH A 6 1206 106 HOH HOH . M 5 HOH A 7 1207 19 HOH HOH . M 5 HOH A 8 1208 126 HOH HOH . M 5 HOH A 9 1209 50 HOH HOH . M 5 HOH A 10 1210 122 HOH HOH . M 5 HOH A 11 1211 29 HOH HOH . M 5 HOH A 12 1212 108 HOH HOH . M 5 HOH A 13 1213 66 HOH HOH . M 5 HOH A 14 1214 143 HOH HOH . M 5 HOH A 15 1215 172 HOH HOH . M 5 HOH A 16 1216 156 HOH HOH . M 5 HOH A 17 1217 51 HOH HOH . N 5 HOH B 1 1201 8 HOH HOH . N 5 HOH B 2 1202 162 HOH HOH . N 5 HOH B 3 1203 171 HOH HOH . N 5 HOH B 4 1204 151 HOH HOH . N 5 HOH B 5 1205 23 HOH HOH . N 5 HOH B 6 1206 170 HOH HOH . N 5 HOH B 7 1207 160 HOH HOH . N 5 HOH B 8 1208 36 HOH HOH . N 5 HOH B 9 1209 38 HOH HOH . N 5 HOH B 10 1210 55 HOH HOH . N 5 HOH B 11 1211 37 HOH HOH . N 5 HOH B 12 1212 15 HOH HOH . N 5 HOH B 13 1213 32 HOH HOH . N 5 HOH B 14 1214 27 HOH HOH . N 5 HOH B 15 1215 48 HOH HOH . N 5 HOH B 16 1216 138 HOH HOH . N 5 HOH B 17 1217 65 HOH HOH . N 5 HOH B 18 1218 174 HOH HOH . N 5 HOH B 19 1219 11 HOH HOH . N 5 HOH B 20 1220 80 HOH HOH . N 5 HOH B 21 1221 7 HOH HOH . N 5 HOH B 22 1222 82 HOH HOH . N 5 HOH B 23 1223 99 HOH HOH . N 5 HOH B 24 1224 118 HOH HOH . N 5 HOH B 25 1225 100 HOH HOH . N 5 HOH B 26 1226 93 HOH HOH . N 5 HOH B 27 1227 158 HOH HOH . O 5 HOH C 1 1201 39 HOH HOH . O 5 HOH C 2 1202 17 HOH HOH . O 5 HOH C 3 1203 42 HOH HOH . O 5 HOH C 4 1204 87 HOH HOH . O 5 HOH C 5 1205 145 HOH HOH . O 5 HOH C 6 1206 137 HOH HOH . O 5 HOH C 7 1207 34 HOH HOH . O 5 HOH C 8 1208 129 HOH HOH . O 5 HOH C 9 1209 124 HOH HOH . O 5 HOH C 10 1210 20 HOH HOH . O 5 HOH C 11 1211 64 HOH HOH . O 5 HOH C 12 1212 10 HOH HOH . O 5 HOH C 13 1213 30 HOH HOH . O 5 HOH C 14 1214 31 HOH HOH . O 5 HOH C 15 1215 75 HOH HOH . O 5 HOH C 16 1216 33 HOH HOH . O 5 HOH C 17 1217 173 HOH HOH . O 5 HOH C 18 1218 175 HOH HOH . O 5 HOH C 19 1219 150 HOH HOH . O 5 HOH C 20 1220 57 HOH HOH . O 5 HOH C 21 1221 149 HOH HOH . O 5 HOH C 22 1222 28 HOH HOH . O 5 HOH C 23 1223 169 HOH HOH . O 5 HOH C 24 1224 132 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 11.633 _atom_site.Cartn_y -1.189 _atom_site.Cartn_z -54.237 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.89 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1101 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #