data_8TO4
#
_model_server_result.job_id            nb-lqG8RuITQ4HpPpyXGPw 
_model_server_result.datetime_utc      '2024-11-16 07:49:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8to4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":1103}' 
#
_entry.id    8TO4 
#
_exptl.entry_id    8TO4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              363.39 
_entity.id                          4 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            (2R)-2-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-2-phenyl-N-(1,3-thiazol-2-yl)acetamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.24 
_cell.angle_gamma         90 
_cell.entry_id            8TO4 
_cell.length_a            72.346 
_cell.length_b            103.109 
_cell.length_c            86.867 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8TO4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,O 1 1 
B,H,I,P 2 1 
C,J,K,Q 3 1 
D,L,M,N,R 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 148 D ASN 842 1_555 E MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? 
metalc ? metalc2 A OD2 ASP 161 D ASP 855 1_555 E MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc3 E MG MG . D MG 1101 1_555 F O1A ANP . D ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.843 ? 
metalc ? metalc4 E MG MG . D MG 1101 1_555 F O3A ANP . D ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? 
metalc ? metalc5 E MG MG . D MG 1101 1_555 F O2G ANP . D ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? 
metalc ? metalc6 E MG MG . D MG 1101 1_555 O O HOH . D HOH 1209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc7 B OD1 ASN 148 A ASN 842 1_555 H MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc8 B OD2 ASP 161 A ASP 855 1_555 H MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.796 ? 
metalc ? metalc9 H MG MG . A MG 1101 1_555 I O2G ANP . A ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.911 ? 
metalc ? metalc10 H MG MG . A MG 1101 1_555 I O2A ANP . A ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? 
metalc ? metalc11 H MG MG . A MG 1101 1_555 P O HOH . A HOH 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? 
metalc ? metalc12 C OD1 ASN 148 B ASN 842 1_555 J MG MG . B MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc13 C OD2 ASP 161 B ASP 855 1_555 J MG MG . B MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? 
metalc ? metalc14 J MG MG . B MG 1101 1_555 K O1G ANP . B ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.941 ? 
metalc ? metalc15 J MG MG . B MG 1101 1_555 K O1A ANP . B ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.872 ? 
metalc ? metalc16 D OD1 ASN 148 C ASN 842 1_555 L MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? 
metalc ? metalc17 D OD2 ASP 161 C ASP 855 1_555 L MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.784 ? 
metalc ? metalc18 L MG MG . C MG 1101 1_555 M O2A ANP . C ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? 
metalc ? metalc19 L MG MG . C MG 1101 1_555 M O3A ANP . C ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc20 L MG MG . C MG 1101 1_555 M O3G ANP . C ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? 
metalc ? metalc21 L MG MG . C MG 1101 1_555 R O HOH . C HOH 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.759 ? 
#
_chem_comp.formula           'C19 H13 N3 O3 S' 
_chem_comp.formula_weight    363.39 
_chem_comp.id                IXR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2R)-2-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-2-phenyl-N-(1,3-thiazol-2-yl)acetamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 S19 IXR sing 223 n y 
C18 C17 IXR doub 224 n y 
S19 C15 IXR sing 225 n y 
C17 N16 IXR sing 226 n y 
C25 C26 IXR doub 227 n y 
C25 C24 IXR sing 228 n y 
O20 C13 IXR doub 229 n n 
O01 C02 IXR doub 230 n n 
C15 N16 IXR doub 231 n y 
C15 N14 IXR sing 232 n n 
C26 C21 IXR sing 233 n y 
C24 C23 IXR doub 234 n y 
C04 C03 IXR doub 235 n y 
C04 C05 IXR sing 236 n y 
C13 N14 IXR sing 237 n n 
C13 C12 IXR sing 238 n n 
C02 C03 IXR sing 239 n n 
C02 N11 IXR sing 240 n n 
C03 C08 IXR sing 241 n y 
C05 C06 IXR doub 242 n y 
C21 C12 IXR sing 243 n n 
C21 C22 IXR doub 244 n y 
C23 C22 IXR sing 245 n y 
N11 C12 IXR sing 246 n n 
N11 C09 IXR sing 247 n n 
C08 C09 IXR sing 248 n n 
C08 C07 IXR doub 249 n y 
C06 C07 IXR sing 250 n y 
C09 O10 IXR doub 251 n n 
C17 H1 IXR sing 252 n n 
C22 H2 IXR sing 253 n n 
C24 H3 IXR sing 254 n n 
C26 H4 IXR sing 255 n n 
C04 H5 IXR sing 256 n n 
C05 H6 IXR sing 257 n n 
C06 H7 IXR sing 258 n n 
C07 H8 IXR sing 259 n n 
C12 H9 IXR sing 260 n n 
C18 H10 IXR sing 261 n n 
C23 H11 IXR sing 262 n n 
C25 H12 IXR sing 263 n n 
N14 H13 IXR sing 264 n n 
#
_atom_sites.entry_id                     8TO4 
_atom_sites.fract_transf_matrix[1][1]    0.013823 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002747 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009698 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011737 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 MG D 1 1101 4 MG MG . 
F 3 ANP D 1 1102 1 ANP ANP . 
G 4 IXR D 1 1103 1101 IXR LIG . 
H 2 MG A 1 1101 7 MG MG . 
I 3 ANP A 1 1102 4 ANP ANP . 
J 2 MG B 1 1101 6 MG MG . 
K 3 ANP B 1 1102 3 ANP ANP . 
L 2 MG C 1 1101 5 MG MG . 
M 3 ANP C 1 1102 2 ANP ANP . 
N 4 IXR C 1 1103 1101 IXR LIG . 
O 5 HOH D 1 1201 20 HOH HOH . 
O 5 HOH D 2 1202 12 HOH HOH . 
O 5 HOH D 3 1203 73 HOH HOH . 
O 5 HOH D 4 1204 67 HOH HOH . 
O 5 HOH D 5 1205 57 HOH HOH . 
O 5 HOH D 6 1206 84 HOH HOH . 
O 5 HOH D 7 1207 64 HOH HOH . 
O 5 HOH D 8 1208 83 HOH HOH . 
O 5 HOH D 9 1209 92 HOH HOH . 
O 5 HOH D 10 1210 14 HOH HOH . 
O 5 HOH D 11 1211 80 HOH HOH . 
O 5 HOH D 12 1212 18 HOH HOH . 
O 5 HOH D 13 1213 62 HOH HOH . 
O 5 HOH D 14 1214 4 HOH HOH . 
O 5 HOH D 15 1215 17 HOH HOH . 
O 5 HOH D 16 1216 77 HOH HOH . 
O 5 HOH D 17 1217 68 HOH HOH . 
O 5 HOH D 18 1218 55 HOH HOH . 
P 5 HOH A 1 1201 93 HOH HOH . 
P 5 HOH A 2 1202 60 HOH HOH . 
P 5 HOH A 3 1203 74 HOH HOH . 
P 5 HOH A 4 1204 89 HOH HOH . 
P 5 HOH A 5 1205 87 HOH HOH . 
P 5 HOH A 6 1206 59 HOH HOH . 
P 5 HOH A 7 1207 95 HOH HOH . 
P 5 HOH A 8 1208 70 HOH HOH . 
P 5 HOH A 9 1209 49 HOH HOH . 
P 5 HOH A 10 1210 8 HOH HOH . 
P 5 HOH A 11 1211 82 HOH HOH . 
P 5 HOH A 12 1212 25 HOH HOH . 
P 5 HOH A 13 1213 23 HOH HOH . 
P 5 HOH A 14 1214 21 HOH HOH . 
P 5 HOH A 15 1215 69 HOH HOH . 
P 5 HOH A 16 1216 85 HOH HOH . 
P 5 HOH A 17 1217 81 HOH HOH . 
P 5 HOH A 18 1218 22 HOH HOH . 
Q 5 HOH B 1 1201 94 HOH HOH . 
Q 5 HOH B 2 1202 13 HOH HOH . 
Q 5 HOH B 3 1203 33 HOH HOH . 
Q 5 HOH B 4 1204 75 HOH HOH . 
Q 5 HOH B 5 1205 30 HOH HOH . 
Q 5 HOH B 6 1206 76 HOH HOH . 
Q 5 HOH B 7 1207 71 HOH HOH . 
Q 5 HOH B 8 1208 29 HOH HOH . 
Q 5 HOH B 9 1209 34 HOH HOH . 
Q 5 HOH B 10 1210 56 HOH HOH . 
Q 5 HOH B 11 1211 86 HOH HOH . 
R 5 HOH C 1 1201 91 HOH HOH . 
R 5 HOH C 2 1202 53 HOH HOH . 
R 5 HOH C 3 1203 72 HOH HOH . 
R 5 HOH C 4 1204 43 HOH HOH . 
R 5 HOH C 5 1205 88 HOH HOH . 
R 5 HOH C 6 1206 78 HOH HOH . 
R 5 HOH C 7 1207 47 HOH HOH . 
R 5 HOH C 8 1208 61 HOH HOH . 
R 5 HOH C 9 1209 3 HOH HOH . 
R 5 HOH C 10 1210 51 HOH HOH . 
R 5 HOH C 11 1211 46 HOH HOH . 
R 5 HOH C 12 1212 37 HOH HOH . 
R 5 HOH C 13 1213 39 HOH HOH . 
R 5 HOH C 14 1214 35 HOH HOH . 
R 5 HOH C 15 1215 27 HOH HOH . 
R 5 HOH C 16 1216 45 HOH HOH . 
R 5 HOH C 17 1217 9 HOH HOH . 
R 5 HOH C 18 1218 79 HOH HOH . 
R 5 HOH C 19 1219 26 HOH HOH . 
R 5 HOH C 20 1220 63 HOH HOH . 
R 5 HOH C 21 1221 58 HOH HOH . 
R 5 HOH C 22 1222 7 HOH HOH . 
R 5 HOH C 23 1223 42 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 IXR . . . N 4 40.378 18.665 30.92 1 52.34 ? C13 IXR 1103 C 1 
HETATM 2 C C15 IXR . . . N 4 38.471 17.223 30.118 1 63.12 ? C15 IXR 1103 C 1 
HETATM 3 C C17 IXR . . . N 4 36.427 16.377 29.312 1 34.63 ? C17 IXR 1103 C 1 
HETATM 4 C C21 IXR . . . N 4 42.745 17.927 31.447 1 51.79 ? C21 IXR 1103 C 1 
HETATM 5 C C22 IXR . . . N 4 43.936 17.962 32.155 1 44.02 ? C22 IXR 1103 C 1 
HETATM 6 C C24 IXR . . . N 4 44.772 16.165 30.786 1 37.82 ? C24 IXR 1103 C 1 
HETATM 7 C C26 IXR . . . N 4 42.587 17.015 30.417 1 40.48 ? C26 IXR 1103 C 1 
HETATM 8 C C02 IXR . . . N 4 41.685 21.342 32.537 1 62.96 ? C02 IXR 1103 C 1 
HETATM 9 C C03 IXR . . . N 4 42.429 22.623 32.102 1 58.53 ? C03 IXR 1103 C 1 
HETATM 10 C C04 IXR . . . N 4 42.397 23.942 32.597 1 62.72 ? C04 IXR 1103 C 1 
HETATM 11 C C05 IXR . . . N 4 43.191 24.934 32.021 1 52.06 ? C05 IXR 1103 C 1 
HETATM 12 C C06 IXR . . . N 4 44.02 24.603 30.949 1 53.79 ? C06 IXR 1103 C 1 
HETATM 13 C C07 IXR . . . N 4 44.059 23.296 30.464 1 50.94 ? C07 IXR 1103 C 1 
HETATM 14 C C08 IXR . . . N 4 43.258 22.304 31.04 1 51.72 ? C08 IXR 1103 C 1 
HETATM 15 C C09 IXR . . . N 4 43.09 20.807 30.724 1 64.69 ? C09 IXR 1103 C 1 
HETATM 16 C C12 IXR . . . N 4 41.608 18.888 31.799 1 52.79 ? C12 IXR 1103 C 1 
HETATM 17 C C18 IXR . . . N 4 36.844 17.268 28.296 1 36.24 ? C18 IXR 1103 C 1 
HETATM 18 C C23 IXR . . . N 4 44.944 17.081 31.813 1 44.99 ? C23 IXR 1103 C 1 
HETATM 19 C C25 IXR . . . N 4 43.59 16.13 30.088 1 31.64 ? C25 IXR 1103 C 1 
HETATM 20 N N11 IXR . . . N 4 42.108 20.258 31.674 1 65.22 ? N11 IXR 1103 C 1 
HETATM 21 N N14 IXR . . . N 4 39.625 17.422 30.992 1 54 ? N14 IXR 1103 C 1 
HETATM 22 N N16 IXR . . . N 4 37.413 16.362 30.395 1 52.79 ? N16 IXR 1103 C 1 
HETATM 23 O O01 IXR . . . N 4 40.903 21.254 33.427 1 66.84 ? O01 IXR 1103 C 1 
HETATM 24 O O10 IXR . . . N 4 43.682 20.246 29.851 1 61.54 ? O10 IXR 1103 C 1 
HETATM 25 O O20 IXR . . . N 4 40.045 19.524 30.169 1 57.87 ? O20 IXR 1103 C 1 
HETATM 26 S S19 IXR . . . N 4 38.245 17.946 28.665 1 36.2 ? S19 IXR 1103 C 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    33 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           26 
#