data_8TOR # _model_server_result.job_id SvssJ5X3npjurw2BCxcnIw _model_server_result.datetime_utc '2025-01-05 02:27:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tor # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":805}' # _entry.id 8TOR # _exptl.entry_id 8TOR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8TOR _cell.length_a 180.199 _cell.length_b 180.199 _cell.length_c 70.068 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TOR _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall 'R 3' _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 3 1 FUC NAG C1 O1 . O6 HO6 . sing 3 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C NAG 1 B 1 NAG A 1704 NAG 3 n C NAG 2 B 2 NAG A 1705 NAG 3 n C FUC 3 B 3 FUC A 1706 FUC 4 n D NAG 1 C 1 NAG A 1707 NAG 4 n D NAG 2 C 2 NAG A 1708 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 116 A CYS 133 1_555 A SG CYS 124 A CYS 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 A SG CYS 327 A CYS 344 1_555 A SG CYS 344 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 513 A CYS 530 1_555 A SG CYS 525 A CYS 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A ND2 ASN 73 A ASN 90 1_555 D C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.419 ? covale ? covale2 A ND2 ASN 86 A ASN 103 1_555 C C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.386 ? covale ? covale3 A ND2 ASN 529 A ASN 546 1_555 F C1 NAG . A NAG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.46 ? covale ? covale4 B C ACE 1 E ACE 0 1_555 B N TYR 2 E TYR 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 B CH3 ACE 1 E ACE 0 1_555 B SG CYS 14 E CYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale6 B C CYS 14 E CYS 13 1_555 B N NH2 15 E NH2 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.413 ? covale ? covale7 C O4 NAG . B NAG 1 1_555 C C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale8 C O6 NAG . B NAG 1 1_555 C C1 FUC . B FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.423 ? covale ? covale9 D O4 NAG . C NAG 1 1_555 D C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? metalc ? metalc1 A NE2 HIS 357 A HIS 374 1_555 J ZN ZN . A ZN 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc2 A NE2 HIS 361 A HIS 378 1_555 J ZN ZN . A ZN 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc3 A OE1 GLU 385 A GLU 402 1_555 J ZN ZN . A ZN 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc4 A OE2 GLU 385 A GLU 402 1_555 J ZN ZN . A ZN 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc5 J ZN ZN . A ZN 806 1_555 K O HOH . A HOH 941 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8TOR _atom_sites.fract_transf_matrix[1][1] 0.005549 _atom_sites.fract_transf_matrix[1][2] 0.003204 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006408 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014272 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 GOL A 1 801 801 GOL GOL . F 6 NAG A 1 802 1546 NAG NAG . G 5 GOL A 1 803 1601 GOL GOL . H 5 GOL A 1 804 1701 GOL GOL . I 7 CL A 1 805 1 CL CL . J 8 ZN A 1 806 1 ZN ZN . K 9 HOH A 1 901 3 HOH HOH . K 9 HOH A 2 902 2 HOH HOH . K 9 HOH A 3 903 70 HOH HOH . K 9 HOH A 4 904 30 HOH HOH . K 9 HOH A 5 905 20 HOH HOH . K 9 HOH A 6 906 42 HOH HOH . K 9 HOH A 7 907 10 HOH HOH . K 9 HOH A 8 908 54 HOH HOH . K 9 HOH A 9 909 6 HOH HOH . K 9 HOH A 10 910 50 HOH HOH . K 9 HOH A 11 911 40 HOH HOH . K 9 HOH A 12 912 44 HOH HOH . K 9 HOH A 13 913 47 HOH HOH . K 9 HOH A 14 914 21 HOH HOH . K 9 HOH A 15 915 64 HOH HOH . K 9 HOH A 16 916 53 HOH HOH . K 9 HOH A 17 917 19 HOH HOH . K 9 HOH A 18 918 1 HOH HOH . K 9 HOH A 19 919 69 HOH HOH . K 9 HOH A 20 920 62 HOH HOH . K 9 HOH A 21 921 22 HOH HOH . K 9 HOH A 22 922 18 HOH HOH . K 9 HOH A 23 923 16 HOH HOH . K 9 HOH A 24 924 43 HOH HOH . K 9 HOH A 25 925 4 HOH HOH . K 9 HOH A 26 926 15 HOH HOH . K 9 HOH A 27 927 36 HOH HOH . K 9 HOH A 28 928 24 HOH HOH . K 9 HOH A 29 929 52 HOH HOH . K 9 HOH A 30 930 23 HOH HOH . K 9 HOH A 31 931 45 HOH HOH . K 9 HOH A 32 932 9 HOH HOH . K 9 HOH A 33 933 51 HOH HOH . K 9 HOH A 34 934 34 HOH HOH . K 9 HOH A 35 935 37 HOH HOH . K 9 HOH A 36 936 33 HOH HOH . K 9 HOH A 37 937 11 HOH HOH . K 9 HOH A 38 938 41 HOH HOH . K 9 HOH A 39 939 67 HOH HOH . K 9 HOH A 40 940 26 HOH HOH . K 9 HOH A 41 941 68 HOH HOH . K 9 HOH A 42 942 35 HOH HOH . K 9 HOH A 43 943 28 HOH HOH . K 9 HOH A 44 944 38 HOH HOH . K 9 HOH A 45 945 25 HOH HOH . K 9 HOH A 46 946 13 HOH HOH . K 9 HOH A 47 947 58 HOH HOH . K 9 HOH A 48 948 59 HOH HOH . K 9 HOH A 49 949 31 HOH HOH . K 9 HOH A 50 950 8 HOH HOH . K 9 HOH A 51 951 5 HOH HOH . K 9 HOH A 52 952 27 HOH HOH . K 9 HOH A 53 953 17 HOH HOH . K 9 HOH A 54 954 56 HOH HOH . K 9 HOH A 55 955 71 HOH HOH . K 9 HOH A 56 956 61 HOH HOH . K 9 HOH A 57 957 48 HOH HOH . K 9 HOH A 58 958 7 HOH HOH . K 9 HOH A 59 959 32 HOH HOH . K 9 HOH A 60 960 49 HOH HOH . K 9 HOH A 61 961 65 HOH HOH . K 9 HOH A 62 962 55 HOH HOH . K 9 HOH A 63 963 12 HOH HOH . K 9 HOH A 64 964 29 HOH HOH . K 9 HOH A 65 965 46 HOH HOH . K 9 HOH A 66 966 57 HOH HOH . K 9 HOH A 67 967 60 HOH HOH . K 9 HOH A 68 968 72 HOH HOH . K 9 HOH A 69 969 66 HOH HOH . K 9 HOH A 70 970 14 HOH HOH . K 9 HOH A 71 971 63 HOH HOH . L 9 HOH E 1 101 39 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 7 _atom_site.Cartn_x -39.846 _atom_site.Cartn_y -1.452 _atom_site.Cartn_z -16.933 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.56 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 805 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #