data_8TPG # _model_server_result.job_id CS0jxRvxn-JVxTxQw8ewng _model_server_result.datetime_utc '2024-11-21 17:35:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tpg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 8TPG # _exptl.entry_id 8TPG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 451.601 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R)-N-(4-tert-butylphenyl)-N-[(1R)-2-(cyclohexylamino)-2-oxo-1-(pyridin-3-yl)ethyl]-3-hydroxybutanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.13 _cell.angle_gamma 90 _cell.entry_id 8TPG _cell.length_a 114.268 _cell.length_b 53.304 _cell.length_c 44.967 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TPG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H37 N3 O3' _chem_comp.formula_weight 451.601 _chem_comp.id JKL _chem_comp.mon_nstd_flag . _chem_comp.name (3R)-N-(4-tert-butylphenyl)-N-[(1R)-2-(cyclohexylamino)-2-oxo-1-(pyridin-3-yl)ethyl]-3-hydroxybutanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C21 N22 JKL doub 173 n y C21 C20 JKL sing 174 n y N22 C23 JKL sing 175 n y C20 C19 JKL doub 176 n y C23 C18 JKL doub 177 n y C19 C18 JKL sing 178 n y C18 C08 JKL sing 179 n n O06 C05 JKL doub 180 n n C04 C05 JKL sing 181 n n C04 C02 JKL sing 182 n n C05 N07 JKL sing 183 n n O10 C09 JKL doub 184 n n O03 C02 JKL sing 185 n n N07 C08 JKL sing 186 n n N07 C24 JKL sing 187 n n C25 C24 JKL doub 188 n y C25 C26 JKL sing 189 n y C08 C09 JKL sing 190 n n C02 C01 JKL sing 191 n n C09 N11 JKL sing 192 n n C24 C29 JKL sing 193 n y C26 C27 JKL doub 194 n y N11 C12 JKL sing 195 n n C12 C13 JKL sing 196 n n C12 C17 JKL sing 197 n n C13 C14 JKL sing 198 n n C29 C28 JKL doub 199 n y C31 C30 JKL sing 200 n n C27 C28 JKL sing 201 n y C27 C30 JKL sing 202 n n C14 C15 JKL sing 203 n n C17 C16 JKL sing 204 n n C15 C16 JKL sing 205 n n C30 C33 JKL sing 206 n n C30 C32 JKL sing 207 n n C13 H1 JKL sing 208 n n C13 H2 JKL sing 209 n n C15 H3 JKL sing 210 n n C15 H4 JKL sing 211 n n C17 H5 JKL sing 212 n n C17 H6 JKL sing 213 n n C20 H7 JKL sing 214 n n C21 H8 JKL sing 215 n n C26 H9 JKL sing 216 n n C28 H10 JKL sing 217 n n C01 H11 JKL sing 218 n n C01 H12 JKL sing 219 n n C01 H13 JKL sing 220 n n C02 H14 JKL sing 221 n n C04 H15 JKL sing 222 n n C04 H16 JKL sing 223 n n C08 H17 JKL sing 224 n n C12 H18 JKL sing 225 n n C14 H19 JKL sing 226 n n C14 H20 JKL sing 227 n n C16 H21 JKL sing 228 n n C16 H22 JKL sing 229 n n C19 H23 JKL sing 230 n n C23 H24 JKL sing 231 n n C25 H25 JKL sing 232 n n C29 H26 JKL sing 233 n n C31 H27 JKL sing 234 n n C31 H28 JKL sing 235 n n C31 H29 JKL sing 236 n n C32 H30 JKL sing 237 n n C32 H31 JKL sing 238 n n C32 H32 JKL sing 239 n n C33 H33 JKL sing 240 n n C33 H34 JKL sing 241 n n C33 H35 JKL sing 242 n n N11 H36 JKL sing 243 n n O03 H37 JKL sing 244 n n # _atom_sites.entry_id 8TPG _atom_sites.fract_transf_matrix[1][1] 0.008751 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00188 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01876 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022746 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JKL A 1 500 500 JKL LIG . C 3 HOH A 1 601 172 HOH HOH . C 3 HOH A 2 602 98 HOH HOH . C 3 HOH A 3 603 12 HOH HOH . C 3 HOH A 4 604 157 HOH HOH . C 3 HOH A 5 605 166 HOH HOH . C 3 HOH A 6 606 51 HOH HOH . C 3 HOH A 7 607 92 HOH HOH . C 3 HOH A 8 608 95 HOH HOH . C 3 HOH A 9 609 120 HOH HOH . C 3 HOH A 10 610 28 HOH HOH . C 3 HOH A 11 611 17 HOH HOH . C 3 HOH A 12 612 87 HOH HOH . C 3 HOH A 13 613 141 HOH HOH . C 3 HOH A 14 614 90 HOH HOH . C 3 HOH A 15 615 31 HOH HOH . C 3 HOH A 16 616 5 HOH HOH . C 3 HOH A 17 617 163 HOH HOH . C 3 HOH A 18 618 9 HOH HOH . C 3 HOH A 19 619 39 HOH HOH . C 3 HOH A 20 620 25 HOH HOH . C 3 HOH A 21 621 32 HOH HOH . C 3 HOH A 22 622 79 HOH HOH . C 3 HOH A 23 623 127 HOH HOH . C 3 HOH A 24 624 53 HOH HOH . C 3 HOH A 25 625 174 HOH HOH . C 3 HOH A 26 626 148 HOH HOH . C 3 HOH A 27 627 179 HOH HOH . C 3 HOH A 28 628 18 HOH HOH . C 3 HOH A 29 629 70 HOH HOH . C 3 HOH A 30 630 65 HOH HOH . C 3 HOH A 31 631 137 HOH HOH . C 3 HOH A 32 632 61 HOH HOH . C 3 HOH A 33 633 135 HOH HOH . C 3 HOH A 34 634 47 HOH HOH . C 3 HOH A 35 635 76 HOH HOH . C 3 HOH A 36 636 34 HOH HOH . C 3 HOH A 37 637 15 HOH HOH . C 3 HOH A 38 638 165 HOH HOH . C 3 HOH A 39 639 156 HOH HOH . C 3 HOH A 40 640 27 HOH HOH . C 3 HOH A 41 641 167 HOH HOH . C 3 HOH A 42 642 33 HOH HOH . C 3 HOH A 43 643 159 HOH HOH . C 3 HOH A 44 644 54 HOH HOH . C 3 HOH A 45 645 158 HOH HOH . C 3 HOH A 46 646 3 HOH HOH . C 3 HOH A 47 647 80 HOH HOH . C 3 HOH A 48 648 2 HOH HOH . C 3 HOH A 49 649 82 HOH HOH . C 3 HOH A 50 650 136 HOH HOH . C 3 HOH A 51 651 10 HOH HOH . C 3 HOH A 52 652 78 HOH HOH . C 3 HOH A 53 653 128 HOH HOH . C 3 HOH A 54 654 19 HOH HOH . C 3 HOH A 55 655 149 HOH HOH . C 3 HOH A 56 656 6 HOH HOH . C 3 HOH A 57 657 26 HOH HOH . C 3 HOH A 58 658 38 HOH HOH . C 3 HOH A 59 659 45 HOH HOH . C 3 HOH A 60 660 7 HOH HOH . C 3 HOH A 61 661 67 HOH HOH . C 3 HOH A 62 662 111 HOH HOH . C 3 HOH A 63 663 132 HOH HOH . C 3 HOH A 64 664 147 HOH HOH . C 3 HOH A 65 665 66 HOH HOH . C 3 HOH A 66 666 44 HOH HOH . C 3 HOH A 67 667 85 HOH HOH . C 3 HOH A 68 668 4 HOH HOH . C 3 HOH A 69 669 152 HOH HOH . C 3 HOH A 70 670 88 HOH HOH . C 3 HOH A 71 671 192 HOH HOH . C 3 HOH A 72 672 104 HOH HOH . C 3 HOH A 73 673 36 HOH HOH . C 3 HOH A 74 674 8 HOH HOH . C 3 HOH A 75 675 189 HOH HOH . C 3 HOH A 76 676 155 HOH HOH . C 3 HOH A 77 677 30 HOH HOH . C 3 HOH A 78 678 118 HOH HOH . C 3 HOH A 79 679 106 HOH HOH . C 3 HOH A 80 680 57 HOH HOH . C 3 HOH A 81 681 103 HOH HOH . C 3 HOH A 82 682 73 HOH HOH . C 3 HOH A 83 683 16 HOH HOH . C 3 HOH A 84 684 1 HOH HOH . C 3 HOH A 85 685 107 HOH HOH . C 3 HOH A 86 686 22 HOH HOH . C 3 HOH A 87 687 101 HOH HOH . C 3 HOH A 88 688 142 HOH HOH . C 3 HOH A 89 689 14 HOH HOH . C 3 HOH A 90 690 177 HOH HOH . C 3 HOH A 91 691 49 HOH HOH . C 3 HOH A 92 692 62 HOH HOH . C 3 HOH A 93 693 99 HOH HOH . C 3 HOH A 94 694 50 HOH HOH . C 3 HOH A 95 695 52 HOH HOH . C 3 HOH A 96 696 89 HOH HOH . C 3 HOH A 97 697 121 HOH HOH . C 3 HOH A 98 698 131 HOH HOH . C 3 HOH A 99 699 37 HOH HOH . C 3 HOH A 100 700 24 HOH HOH . C 3 HOH A 101 701 13 HOH HOH . C 3 HOH A 102 702 72 HOH HOH . C 3 HOH A 103 703 75 HOH HOH . C 3 HOH A 104 704 55 HOH HOH . C 3 HOH A 105 705 178 HOH HOH . C 3 HOH A 106 706 56 HOH HOH . C 3 HOH A 107 707 48 HOH HOH . C 3 HOH A 108 708 96 HOH HOH . C 3 HOH A 109 709 170 HOH HOH . C 3 HOH A 110 710 20 HOH HOH . C 3 HOH A 111 711 191 HOH HOH . C 3 HOH A 112 712 74 HOH HOH . C 3 HOH A 113 713 180 HOH HOH . C 3 HOH A 114 714 169 HOH HOH . C 3 HOH A 115 715 21 HOH HOH . C 3 HOH A 116 716 133 HOH HOH . C 3 HOH A 117 717 139 HOH HOH . C 3 HOH A 118 718 129 HOH HOH . C 3 HOH A 119 719 68 HOH HOH . C 3 HOH A 120 720 110 HOH HOH . C 3 HOH A 121 721 43 HOH HOH . C 3 HOH A 122 722 188 HOH HOH . C 3 HOH A 123 723 193 HOH HOH . C 3 HOH A 124 724 146 HOH HOH . C 3 HOH A 125 725 134 HOH HOH . C 3 HOH A 126 726 160 HOH HOH . C 3 HOH A 127 727 84 HOH HOH . C 3 HOH A 128 728 109 HOH HOH . C 3 HOH A 129 729 185 HOH HOH . C 3 HOH A 130 730 35 HOH HOH . C 3 HOH A 131 731 41 HOH HOH . C 3 HOH A 132 732 83 HOH HOH . C 3 HOH A 133 733 162 HOH HOH . C 3 HOH A 134 734 161 HOH HOH . C 3 HOH A 135 735 119 HOH HOH . C 3 HOH A 136 736 91 HOH HOH . C 3 HOH A 137 737 187 HOH HOH . C 3 HOH A 138 738 71 HOH HOH . C 3 HOH A 139 739 144 HOH HOH . C 3 HOH A 140 740 100 HOH HOH . C 3 HOH A 141 741 184 HOH HOH . C 3 HOH A 142 742 150 HOH HOH . C 3 HOH A 143 743 138 HOH HOH . C 3 HOH A 144 744 123 HOH HOH . C 3 HOH A 145 745 11 HOH HOH . C 3 HOH A 146 746 168 HOH HOH . C 3 HOH A 147 747 176 HOH HOH . C 3 HOH A 148 748 64 HOH HOH . C 3 HOH A 149 749 23 HOH HOH . C 3 HOH A 150 750 153 HOH HOH . C 3 HOH A 151 751 115 HOH HOH . C 3 HOH A 152 752 125 HOH HOH . C 3 HOH A 153 753 175 HOH HOH . C 3 HOH A 154 754 108 HOH HOH . C 3 HOH A 155 755 126 HOH HOH . C 3 HOH A 156 756 197 HOH HOH . C 3 HOH A 157 757 154 HOH HOH . C 3 HOH A 158 758 182 HOH HOH . C 3 HOH A 159 759 81 HOH HOH . C 3 HOH A 160 760 190 HOH HOH . C 3 HOH A 161 761 194 HOH HOH . C 3 HOH A 162 762 183 HOH HOH . C 3 HOH A 163 763 42 HOH HOH . C 3 HOH A 164 764 116 HOH HOH . C 3 HOH A 165 765 60 HOH HOH . C 3 HOH A 166 766 151 HOH HOH . C 3 HOH A 167 767 69 HOH HOH . C 3 HOH A 168 768 173 HOH HOH . C 3 HOH A 169 769 140 HOH HOH . C 3 HOH A 170 770 105 HOH HOH . C 3 HOH A 171 771 102 HOH HOH . C 3 HOH A 172 772 195 HOH HOH . C 3 HOH A 173 773 29 HOH HOH . C 3 HOH A 174 774 112 HOH HOH . C 3 HOH A 175 775 113 HOH HOH . C 3 HOH A 176 776 117 HOH HOH . C 3 HOH A 177 777 186 HOH HOH . C 3 HOH A 178 778 124 HOH HOH . C 3 HOH A 179 779 58 HOH HOH . C 3 HOH A 180 780 63 HOH HOH . C 3 HOH A 181 781 40 HOH HOH . C 3 HOH A 182 782 59 HOH HOH . C 3 HOH A 183 783 196 HOH HOH . C 3 HOH A 184 784 145 HOH HOH . C 3 HOH A 185 785 130 HOH HOH . C 3 HOH A 186 786 114 HOH HOH . C 3 HOH A 187 787 94 HOH HOH . C 3 HOH A 188 788 93 HOH HOH . C 3 HOH A 189 789 171 HOH HOH . C 3 HOH A 190 790 97 HOH HOH . C 3 HOH A 191 791 86 HOH HOH . C 3 HOH A 192 792 164 HOH HOH . C 3 HOH A 193 793 143 HOH HOH . C 3 HOH A 194 794 122 HOH HOH . C 3 HOH A 195 795 77 HOH HOH . C 3 HOH A 196 796 181 HOH HOH . C 3 HOH A 197 797 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 JKL . . . B 2 8.565 4.499 23.034 1 61.71 ? C13 JKL 500 A 1 HETATM 2 C C15 JKL . . . B 2 10.887 5.098 23.942 1 68.59 ? C15 JKL 500 A 1 HETATM 3 C C17 JKL . . . B 2 10.217 2.632 23.789 1 58.05 ? C17 JKL 500 A 1 HETATM 4 C C20 JKL . . . B 2 4.831 1.688 18.58 1 48.69 ? C20 JKL 500 A 1 HETATM 5 C C21 JKL . . . B 2 5.599 1.388 17.461 1 58.29 ? C21 JKL 500 A 1 HETATM 6 C C24 JKL . . . B 2 8.893 -1.326 21.885 1 64.33 ? C24 JKL 500 A 1 HETATM 7 C C26 JKL . . . B 2 11.298 -1.572 22.01 1 59.54 ? C26 JKL 500 A 1 HETATM 8 C C28 JKL . . . B 2 10.012 -1.472 24.032 1 65.46 ? C28 JKL 500 A 1 HETATM 9 C C01 JKL . . . B 2 6.975 -4.135 22.591 1 75.41 ? C01 JKL 500 A 1 HETATM 10 C C02 JKL . . . B 2 7.819 -4.47 21.374 1 77.45 ? C02 JKL 500 A 1 HETATM 11 C C04 JKL . . . B 2 7.363 -3.614 20.204 1 59.03 ? C04 JKL 500 A 1 HETATM 12 C C05 JKL . . . B 2 6.865 -2.194 20.469 1 69.32 ? C05 JKL 500 A 1 HETATM 13 C C08 JKL . . . B 2 7.054 0.192 21.279 1 62.89 ? C08 JKL 500 A 1 HETATM 14 C C09 JKL . . . B 2 8.165 1.232 21.504 1 62.97 ? C09 JKL 500 A 1 HETATM 15 C C12 JKL . . . B 2 9.207 3.132 22.749 1 56.39 ? C12 JKL 500 A 1 HETATM 16 C C14 JKL . . . B 2 9.514 5.606 23.496 1 64.9 ? C14 JKL 500 A 1 HETATM 17 C C16 JKL . . . B 2 10.791 3.749 24.657 1 64.39 ? C16 JKL 500 A 1 HETATM 18 C C18 JKL . . . B 2 6.489 0.643 19.927 1 60.11 ? C18 JKL 500 A 1 HETATM 19 C C19 JKL . . . B 2 5.271 1.315 19.841 1 55.58 ? C19 JKL 500 A 1 HETATM 20 C C23 JKL . . . B 2 7.193 0.386 18.745 1 53 ? C23 JKL 500 A 1 HETATM 21 C C25 JKL . . . B 2 10.133 -1.436 21.251 1 53.02 ? C25 JKL 500 A 1 HETATM 22 C C27 JKL . . . B 2 11.242 -1.597 23.4 1 66.1 ? C27 JKL 500 A 1 HETATM 23 C C29 JKL . . . B 2 8.853 -1.335 23.281 1 64.27 ? C29 JKL 500 A 1 HETATM 24 C C30 JKL . . . B 2 12.522 -1.743 24.248 1 73.04 ? C30 JKL 500 A 1 HETATM 25 C C31 JKL . . . B 2 13.725 -2.024 23.349 1 73.26 ? C31 JKL 500 A 1 HETATM 26 C C32 JKL . . . B 2 12.388 -2.895 25.246 1 77.42 ? C32 JKL 500 A 1 HETATM 27 C C33 JKL . . . B 2 12.764 -0.447 25.027 1 71.14 ? C33 JKL 500 A 1 HETATM 28 N N07 JKL . . . B 2 7.612 -1.146 21.185 1 67.67 ? N07 JKL 500 A 1 HETATM 29 N N11 JKL . . . B 2 8.121 2.163 22.623 1 64.67 ? N11 JKL 500 A 1 HETATM 30 N N22 JKL . . . B 2 6.751 0.746 17.556 1 45.02 ? N22 JKL 500 A 1 HETATM 31 O O03 JKL . . . B 2 7.579 -5.81 21.002 1 91.31 ? O03 JKL 500 A 1 HETATM 32 O O06 JKL . . . B 2 5.844 -1.976 19.933 1 78.93 ? O06 JKL 500 A 1 HETATM 33 O O10 JKL . . . B 2 9.092 1.311 20.75 1 42.13 ? O10 JKL 500 A 1 # _model_server_stats.io_time_ms 79 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #