data_8TQ7 # _model_server_result.job_id Igxi9z1Oey2kh9WHr0CE8w _model_server_result.datetime_utc '2024-11-22 04:19:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tq7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":301}' # _entry.id 8TQ7 # _exptl.entry_id 8TQ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 6 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8TQ7 _cell.length_a 87.587 _cell.length_b 113.326 _cell.length_c 196.369 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TQ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 100 A CYS 101 1_555 A SG CYS 163 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 202 A CYS 203 1_555 A SG CYS 258 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 25 B CYS 25 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 C SG CYS 100 C CYS 101 1_555 C SG CYS 163 C CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 C SG CYS 202 C CYS 203 1_555 C SG CYS 258 C CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 D SG CYS 25 D CYS 25 1_555 D SG CYS 80 D CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 F SG CYS 22 F CYS 22 1_555 F SG CYS 96 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf8 F SG CYS 144 F CYS 144 1_555 F SG CYS 199 F CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf9 G SG CYS 22 G CYS 23 1_555 G SG CYS 87 G CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf10 G SG CYS 133 G CYS 134 1_555 G SG CYS 193 G CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf11 H SG CYS 22 H CYS 22 1_555 H SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf12 H SG CYS 144 H CYS 144 1_555 H SG CYS 199 H CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf13 I SG CYS 22 L CYS 23 1_555 I SG CYS 87 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf14 I SG CYS 133 L CYS 134 1_555 I SG CYS 193 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8TQ7 _atom_sites.fract_transf_matrix[1][1] 0.011417 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005092 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 6 EDO C 1 301 2 EDO EDO . L 7 GOL F 1 301 1 GOL GOL . M 8 HOH A 1 301 25 HOH HOH . M 8 HOH A 2 302 98 HOH HOH . M 8 HOH A 3 303 48 HOH HOH . M 8 HOH A 4 304 27 HOH HOH . M 8 HOH A 5 305 74 HOH HOH . M 8 HOH A 6 306 99 HOH HOH . M 8 HOH A 7 307 83 HOH HOH . M 8 HOH A 8 308 52 HOH HOH . M 8 HOH A 9 309 106 HOH HOH . M 8 HOH A 10 310 89 HOH HOH . M 8 HOH A 11 311 81 HOH HOH . M 8 HOH A 12 312 42 HOH HOH . M 8 HOH A 13 313 43 HOH HOH . M 8 HOH A 14 314 57 HOH HOH . M 8 HOH A 15 315 109 HOH HOH . M 8 HOH A 16 316 110 HOH HOH . M 8 HOH A 17 317 60 HOH HOH . M 8 HOH A 18 318 77 HOH HOH . M 8 HOH A 19 319 9 HOH HOH . M 8 HOH A 20 320 90 HOH HOH . M 8 HOH A 21 321 119 HOH HOH . M 8 HOH A 22 322 128 HOH HOH . M 8 HOH A 23 323 121 HOH HOH . N 8 HOH B 1 101 44 HOH HOH . N 8 HOH B 2 102 45 HOH HOH . N 8 HOH B 3 103 105 HOH HOH . N 8 HOH B 4 104 24 HOH HOH . N 8 HOH B 5 105 29 HOH HOH . N 8 HOH B 6 106 87 HOH HOH . N 8 HOH B 7 107 58 HOH HOH . N 8 HOH B 8 108 41 HOH HOH . N 8 HOH B 9 109 28 HOH HOH . N 8 HOH B 10 110 39 HOH HOH . N 8 HOH B 11 111 10 HOH HOH . N 8 HOH B 12 112 16 HOH HOH . N 8 HOH B 13 113 54 HOH HOH . N 8 HOH B 14 114 73 HOH HOH . N 8 HOH B 15 115 2 HOH HOH . N 8 HOH B 16 116 51 HOH HOH . N 8 HOH B 17 117 118 HOH HOH . N 8 HOH B 18 118 95 HOH HOH . N 8 HOH B 19 119 64 HOH HOH . O 8 HOH C 1 401 37 HOH HOH . O 8 HOH C 2 402 80 HOH HOH . O 8 HOH C 3 403 21 HOH HOH . O 8 HOH C 4 404 31 HOH HOH . O 8 HOH C 5 405 13 HOH HOH . O 8 HOH C 6 406 111 HOH HOH . O 8 HOH C 7 407 30 HOH HOH . O 8 HOH C 8 408 107 HOH HOH . O 8 HOH C 9 409 91 HOH HOH . O 8 HOH C 10 410 86 HOH HOH . O 8 HOH C 11 411 17 HOH HOH . O 8 HOH C 12 412 85 HOH HOH . O 8 HOH C 13 413 82 HOH HOH . P 8 HOH D 1 101 72 HOH HOH . P 8 HOH D 2 102 84 HOH HOH . P 8 HOH D 3 103 130 HOH HOH . Q 8 HOH E 1 101 5 HOH HOH . Q 8 HOH E 2 102 40 HOH HOH . Q 8 HOH E 3 103 61 HOH HOH . R 8 HOH F 1 401 114 HOH HOH . R 8 HOH F 2 402 59 HOH HOH . R 8 HOH F 3 403 67 HOH HOH . R 8 HOH F 4 404 47 HOH HOH . R 8 HOH F 5 405 68 HOH HOH . R 8 HOH F 6 406 18 HOH HOH . R 8 HOH F 7 407 79 HOH HOH . R 8 HOH F 8 408 102 HOH HOH . R 8 HOH F 9 409 20 HOH HOH . R 8 HOH F 10 410 63 HOH HOH . R 8 HOH F 11 411 33 HOH HOH . R 8 HOH F 12 412 56 HOH HOH . R 8 HOH F 13 413 8 HOH HOH . R 8 HOH F 14 414 94 HOH HOH . R 8 HOH F 15 415 65 HOH HOH . R 8 HOH F 16 416 26 HOH HOH . R 8 HOH F 17 417 34 HOH HOH . R 8 HOH F 18 418 92 HOH HOH . R 8 HOH F 19 419 15 HOH HOH . R 8 HOH F 20 420 104 HOH HOH . R 8 HOH F 21 421 124 HOH HOH . R 8 HOH F 22 422 113 HOH HOH . R 8 HOH F 23 423 125 HOH HOH . R 8 HOH F 24 424 126 HOH HOH . R 8 HOH F 25 425 122 HOH HOH . R 8 HOH F 26 426 123 HOH HOH . S 8 HOH G 1 301 108 HOH HOH . S 8 HOH G 2 302 6 HOH HOH . S 8 HOH G 3 303 14 HOH HOH . T 8 HOH H 1 301 7 HOH HOH . T 8 HOH H 2 302 88 HOH HOH . T 8 HOH H 3 303 35 HOH HOH . T 8 HOH H 4 304 71 HOH HOH . T 8 HOH H 5 305 3 HOH HOH . T 8 HOH H 6 306 46 HOH HOH . T 8 HOH H 7 307 12 HOH HOH . T 8 HOH H 8 308 36 HOH HOH . T 8 HOH H 9 309 103 HOH HOH . T 8 HOH H 10 310 76 HOH HOH . T 8 HOH H 11 311 11 HOH HOH . T 8 HOH H 12 312 4 HOH HOH . T 8 HOH H 13 313 62 HOH HOH . T 8 HOH H 14 314 19 HOH HOH . T 8 HOH H 15 315 97 HOH HOH . T 8 HOH H 16 316 1 HOH HOH . T 8 HOH H 17 317 101 HOH HOH . T 8 HOH H 18 318 50 HOH HOH . T 8 HOH H 19 319 38 HOH HOH . T 8 HOH H 20 320 100 HOH HOH . T 8 HOH H 21 321 93 HOH HOH . T 8 HOH H 22 322 55 HOH HOH . T 8 HOH H 23 323 117 HOH HOH . T 8 HOH H 24 324 78 HOH HOH . T 8 HOH H 25 325 32 HOH HOH . T 8 HOH H 26 326 75 HOH HOH . T 8 HOH H 27 327 112 HOH HOH . T 8 HOH H 28 328 49 HOH HOH . T 8 HOH H 29 329 69 HOH HOH . T 8 HOH H 30 330 127 HOH HOH . T 8 HOH H 31 331 129 HOH HOH . T 8 HOH H 32 332 66 HOH HOH . T 8 HOH H 33 333 115 HOH HOH . T 8 HOH H 34 334 116 HOH HOH . U 8 HOH L 1 301 70 HOH HOH . U 8 HOH L 2 302 22 HOH HOH . U 8 HOH L 3 303 120 HOH HOH . U 8 HOH L 4 304 53 HOH HOH . U 8 HOH L 5 305 23 HOH HOH . U 8 HOH L 6 306 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . K 6 6.373 56.285 49.024 1 64.8 ? C1 EDO 301 C 1 HETATM 2 O O1 EDO . . . K 6 7.298 56.432 47.943 1 66.05 ? O1 EDO 301 C 1 HETATM 3 C C2 EDO . . . K 6 4.953 56.546 48.532 1 62.99 ? C2 EDO 301 C 1 HETATM 4 O O2 EDO . . . K 6 4.605 55.584 47.53 1 68.24 ? O2 EDO 301 C 1 # _model_server_stats.io_time_ms 201 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #