data_8TQ8
#
_model_server_result.job_id            LYLdak2-MFFLRE0TOmfAFQ 
_model_server_result.datetime_utc      '2024-11-21 14:20:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8tq8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":101}' 
#
_entry.id    8TQ8 
#
_exptl.entry_id    8TQ8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8TQ8 
_cell.length_a            87.087 
_cell.length_b            50.892 
_cell.length_c            224.825 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8TQ8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        3 
_symmetry.space_group_name_Hall    'P 2y' 
_symmetry.space_group_name_H-M     'P 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? pentameric 5 author_defined_assembly 1 
? pentameric 5 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,K,L,M,N,S,T,U,V 1 1 
F,G,H,I,J,O,P,Q,R,W,X,Y,Z,AA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 K N N 
? 6 L N N 
? 6 N N N 
? 6 P N N 
? 6 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 100 A CYS 101 1_555 A SG CYS 163 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf2 A SG CYS 202 A CYS 203 1_555 A SG CYS 258 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf3 B SG CYS 25 B CYS 25 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf4 D SG CYS 22 H CYS 22 1_555 D SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf5 D SG CYS 146 H CYS 146 1_555 D SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf6 E SG CYS 23 L CYS 23 1_555 E SG CYS 92 L CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf7 E SG CYS 139 L CYS 139 1_555 E SG CYS 199 L CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf8 F SG CYS 100 C CYS 101 1_555 F SG CYS 163 C CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf9 F SG CYS 202 C CYS 203 1_555 F SG CYS 258 C CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf10 G SG CYS 25 D CYS 25 1_555 G SG CYS 80 D CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf11 I SG CYS 22 F CYS 22 1_555 I SG CYS 96 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf12 I SG CYS 146 F CYS 146 1_555 I SG CYS 201 F CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf13 J SG CYS 23 G CYS 23 1_555 J SG CYS 92 G CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf14 J SG CYS 139 G CYS 139 1_555 J SG CYS 199 G CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 138 n n 
C1 C2 GOL sing 139 n n 
C1 H11 GOL sing 140 n n 
C1 H12 GOL sing 141 n n 
O1 HO1 GOL sing 142 n n 
C2 O2 GOL sing 143 n n 
C2 C3 GOL sing 144 n n 
C2 H2 GOL sing 145 n n 
O2 HO2 GOL sing 146 n n 
C3 O3 GOL sing 147 n n 
C3 H31 GOL sing 148 n n 
C3 H32 GOL sing 149 n n 
O3 HO3 GOL sing 150 n n 
#
_atom_sites.entry_id                     8TQ8 
_atom_sites.fract_transf_matrix[1][1]    0.011483 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019649 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004448 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 6 GOL A 1 301 1 GOL GOL . 
L 6 GOL A 1 302 2 GOL GOL . 
M 7 EDO B 1 101 6 EDO EDO . 
N 6 GOL H 1 301 5 GOL GOL . 
O 7 EDO C 1 301 4 EDO EDO . 
P 6 GOL D 1 101 3 GOL GOL . 
Q 6 GOL D 1 102 8 GOL GOL . 
R 7 EDO F 1 301 7 EDO EDO . 
S 8 HOH A 1 401 119 HOH HOH . 
S 8 HOH A 2 402 73 HOH HOH . 
S 8 HOH A 3 403 117 HOH HOH . 
S 8 HOH A 4 404 3 HOH HOH . 
S 8 HOH A 5 405 122 HOH HOH . 
S 8 HOH A 6 406 90 HOH HOH . 
S 8 HOH A 7 407 30 HOH HOH . 
S 8 HOH A 8 408 79 HOH HOH . 
S 8 HOH A 9 409 84 HOH HOH . 
S 8 HOH A 10 410 60 HOH HOH . 
S 8 HOH A 11 411 59 HOH HOH . 
S 8 HOH A 12 412 54 HOH HOH . 
S 8 HOH A 13 413 71 HOH HOH . 
S 8 HOH A 14 414 94 HOH HOH . 
S 8 HOH A 15 415 55 HOH HOH . 
S 8 HOH A 16 416 87 HOH HOH . 
S 8 HOH A 17 417 8 HOH HOH . 
S 8 HOH A 18 418 78 HOH HOH . 
S 8 HOH A 19 419 67 HOH HOH . 
S 8 HOH A 20 420 49 HOH HOH . 
S 8 HOH A 21 421 4 HOH HOH . 
S 8 HOH A 22 422 96 HOH HOH . 
S 8 HOH A 23 423 110 HOH HOH . 
S 8 HOH A 24 424 51 HOH HOH . 
S 8 HOH A 25 425 99 HOH HOH . 
S 8 HOH A 26 426 43 HOH HOH . 
S 8 HOH A 27 427 52 HOH HOH . 
S 8 HOH A 28 428 26 HOH HOH . 
S 8 HOH A 29 429 116 HOH HOH . 
S 8 HOH A 30 430 111 HOH HOH . 
S 8 HOH A 31 431 93 HOH HOH . 
S 8 HOH A 32 432 118 HOH HOH . 
S 8 HOH A 33 433 98 HOH HOH . 
T 8 HOH B 1 201 45 HOH HOH . 
T 8 HOH B 2 202 28 HOH HOH . 
T 8 HOH B 3 203 40 HOH HOH . 
T 8 HOH B 4 204 32 HOH HOH . 
T 8 HOH B 5 205 2 HOH HOH . 
T 8 HOH B 6 206 36 HOH HOH . 
T 8 HOH B 7 207 22 HOH HOH . 
T 8 HOH B 8 208 15 HOH HOH . 
U 8 HOH H 1 401 29 HOH HOH . 
U 8 HOH H 2 402 101 HOH HOH . 
U 8 HOH H 3 403 85 HOH HOH . 
U 8 HOH H 4 404 12 HOH HOH . 
U 8 HOH H 5 405 89 HOH HOH . 
U 8 HOH H 6 406 7 HOH HOH . 
U 8 HOH H 7 407 107 HOH HOH . 
U 8 HOH H 8 408 6 HOH HOH . 
U 8 HOH H 9 409 112 HOH HOH . 
U 8 HOH H 10 410 92 HOH HOH . 
U 8 HOH H 11 411 42 HOH HOH . 
U 8 HOH H 12 412 31 HOH HOH . 
V 8 HOH L 1 301 74 HOH HOH . 
V 8 HOH L 2 302 33 HOH HOH . 
V 8 HOH L 3 303 83 HOH HOH . 
V 8 HOH L 4 304 38 HOH HOH . 
V 8 HOH L 5 305 103 HOH HOH . 
V 8 HOH L 6 306 25 HOH HOH . 
V 8 HOH L 7 307 70 HOH HOH . 
V 8 HOH L 8 308 34 HOH HOH . 
V 8 HOH L 9 309 88 HOH HOH . 
W 8 HOH C 1 401 69 HOH HOH . 
W 8 HOH C 2 402 104 HOH HOH . 
W 8 HOH C 3 403 61 HOH HOH . 
W 8 HOH C 4 404 19 HOH HOH . 
W 8 HOH C 5 405 17 HOH HOH . 
W 8 HOH C 6 406 24 HOH HOH . 
W 8 HOH C 7 407 11 HOH HOH . 
W 8 HOH C 8 408 41 HOH HOH . 
W 8 HOH C 9 409 50 HOH HOH . 
W 8 HOH C 10 410 35 HOH HOH . 
W 8 HOH C 11 411 121 HOH HOH . 
W 8 HOH C 12 412 9 HOH HOH . 
W 8 HOH C 13 413 10 HOH HOH . 
W 8 HOH C 14 414 64 HOH HOH . 
W 8 HOH C 15 415 46 HOH HOH . 
W 8 HOH C 16 416 18 HOH HOH . 
W 8 HOH C 17 417 63 HOH HOH . 
W 8 HOH C 18 418 72 HOH HOH . 
W 8 HOH C 19 419 13 HOH HOH . 
W 8 HOH C 20 420 20 HOH HOH . 
W 8 HOH C 21 421 65 HOH HOH . 
W 8 HOH C 22 422 53 HOH HOH . 
W 8 HOH C 23 423 21 HOH HOH . 
W 8 HOH C 24 424 100 HOH HOH . 
W 8 HOH C 25 425 58 HOH HOH . 
X 8 HOH D 1 201 91 HOH HOH . 
X 8 HOH D 2 202 109 HOH HOH . 
X 8 HOH D 3 203 114 HOH HOH . 
X 8 HOH D 4 204 76 HOH HOH . 
X 8 HOH D 5 205 62 HOH HOH . 
X 8 HOH D 6 206 1 HOH HOH . 
X 8 HOH D 7 207 120 HOH HOH . 
X 8 HOH D 8 208 123 HOH HOH . 
X 8 HOH D 9 209 57 HOH HOH . 
X 8 HOH D 10 210 102 HOH HOH . 
X 8 HOH D 11 211 66 HOH HOH . 
X 8 HOH D 12 212 82 HOH HOH . 
X 8 HOH D 13 213 86 HOH HOH . 
X 8 HOH D 14 214 106 HOH HOH . 
Y 8 HOH E 1 101 81 HOH HOH . 
Z 8 HOH F 1 401 75 HOH HOH . 
Z 8 HOH F 2 402 39 HOH HOH . 
Z 8 HOH F 3 403 68 HOH HOH . 
Z 8 HOH F 4 404 27 HOH HOH . 
Z 8 HOH F 5 405 5 HOH HOH . 
Z 8 HOH F 6 406 23 HOH HOH . 
Z 8 HOH F 7 407 77 HOH HOH . 
Z 8 HOH F 8 408 113 HOH HOH . 
Z 8 HOH F 9 409 44 HOH HOH . 
Z 8 HOH F 10 410 115 HOH HOH . 
Z 8 HOH F 11 411 14 HOH HOH . 
Z 8 HOH F 12 412 48 HOH HOH . 
Z 8 HOH F 13 413 95 HOH HOH . 
Z 8 HOH F 14 414 108 HOH HOH . 
Z 8 HOH F 15 415 56 HOH HOH . 
Z 8 HOH F 16 416 16 HOH HOH . 
Z 8 HOH F 17 417 37 HOH HOH . 
Z 8 HOH F 18 418 47 HOH HOH . 
AA 8 HOH G 1 301 80 HOH HOH . 
AA 8 HOH G 2 302 105 HOH HOH . 
AA 8 HOH G 3 303 97 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . P 6 78.482 -13.39 71.583 1 20.62 ? C1 GOL 101 D 1 
HETATM 2 O O1 GOL . . . P 6 79.777 -13.632 71.13 1 27.14 ? O1 GOL 101 D 1 
HETATM 3 C C2 GOL . . . P 6 78.591 -12.419 72.784 1 25.46 ? C2 GOL 101 D 1 
HETATM 4 O O2 GOL . . . P 6 77.417 -12.396 73.522 1 16.92 ? O2 GOL 101 D 1 
HETATM 5 C C3 GOL . . . P 6 78.945 -11.036 72.156 1 80.65 ? C3 GOL 101 D 1 
HETATM 6 O O3 GOL . . . P 6 79.014 -10.101 73.193 1 25.64 ? O3 GOL 101 D 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           247 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#