data_8TQA
#
_model_server_result.job_id            '_jpJCY8R280t2HuowIIbGQ' 
_model_server_result.datetime_utc      '2024-11-22 07:14:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8tqa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":301}' 
#
_entry.id    8TQA 
#
_exptl.entry_id    8TQA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98 
_cell.angle_gamma         90 
_cell.entry_id            8TQA 
_cell.length_a            71.387 
_cell.length_b            70.185 
_cell.length_c            94.34 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8TQA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      8 
_struct_asym.id                             K 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 100 A CYS 101 1_555 A SG CYS 163 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
disulf ? disulf2 A SG CYS 202 A CYS 203 1_555 A SG CYS 258 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 B SG CYS 25 B CYS 25 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf4 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf5 C SG CYS 143 H CYS 143 1_555 C SG CYS 198 H CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf6 D SG CYS 23 L CYS 23 1_555 D SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
disulf ? disulf7 D SG CYS 134 L CYS 134 1_555 D SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 259 n n 
C1 O1 NAG sing 260 n n 
C1 O5 NAG sing 261 n n 
C1 H1 NAG sing 262 n n 
C2 C3 NAG sing 263 n n 
C2 N2 NAG sing 264 n n 
C2 H2 NAG sing 265 n n 
C3 C4 NAG sing 266 n n 
C3 O3 NAG sing 267 n n 
C3 H3 NAG sing 268 n n 
C4 C5 NAG sing 269 n n 
C4 O4 NAG sing 270 n n 
C4 H4 NAG sing 271 n n 
C5 C6 NAG sing 272 n n 
C5 O5 NAG sing 273 n n 
C5 H5 NAG sing 274 n n 
C6 O6 NAG sing 275 n n 
C6 H61 NAG sing 276 n n 
C6 H62 NAG sing 277 n n 
C7 C8 NAG sing 278 n n 
C7 N2 NAG sing 279 n n 
C7 O7 NAG doub 280 n n 
C8 H81 NAG sing 281 n n 
C8 H82 NAG sing 282 n n 
C8 H83 NAG sing 283 n n 
N2 HN2 NAG sing 284 n n 
O1 HO1 NAG sing 285 n n 
O3 HO3 NAG sing 286 n n 
O4 HO4 NAG sing 287 n n 
O6 HO6 NAG sing 288 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     8TQA 
_atom_sites.fract_transf_matrix[1][1]    0.014008 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001969 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014248 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010704 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 GOL A 1 301 1 GOL GOL . 
G 7 EDO A 1 302 2 EDO EDO . 
H 6 GOL A 1 303 8 GOL GOL . 
I 7 EDO B 1 101 6 EDO EDO . 
J 7 EDO B 1 102 7 EDO EDO . 
K 8 NAG H 1 301 301 NAG NAG . 
L 7 EDO H 1 302 5 EDO EDO . 
M 7 EDO L 1 301 3 EDO EDO . 
N 7 EDO L 1 302 4 EDO EDO . 
O 7 EDO L 1 303 9 EDO EDO . 
P 7 EDO L 1 304 11 EDO EDO . 
Q 7 EDO P 1 101 10 EDO EDO . 
R 9 HOH A 1 401 11 HOH HOH . 
R 9 HOH A 2 402 24 HOH HOH . 
R 9 HOH A 3 403 66 HOH HOH . 
R 9 HOH A 4 404 52 HOH HOH . 
R 9 HOH A 5 405 25 HOH HOH . 
R 9 HOH A 6 406 61 HOH HOH . 
R 9 HOH A 7 407 3 HOH HOH . 
R 9 HOH A 8 408 33 HOH HOH . 
R 9 HOH A 9 409 31 HOH HOH . 
R 9 HOH A 10 410 36 HOH HOH . 
R 9 HOH A 11 411 50 HOH HOH . 
R 9 HOH A 12 412 6 HOH HOH . 
R 9 HOH A 13 413 18 HOH HOH . 
R 9 HOH A 14 414 1 HOH HOH . 
R 9 HOH A 15 415 27 HOH HOH . 
R 9 HOH A 16 416 8 HOH HOH . 
R 9 HOH A 17 417 2 HOH HOH . 
R 9 HOH A 18 418 13 HOH HOH . 
R 9 HOH A 19 419 14 HOH HOH . 
R 9 HOH A 20 420 64 HOH HOH . 
R 9 HOH A 21 421 63 HOH HOH . 
R 9 HOH A 22 422 44 HOH HOH . 
R 9 HOH A 23 423 65 HOH HOH . 
R 9 HOH A 24 424 62 HOH HOH . 
S 9 HOH B 1 201 59 HOH HOH . 
S 9 HOH B 2 202 38 HOH HOH . 
S 9 HOH B 3 203 46 HOH HOH . 
T 9 HOH H 1 401 58 HOH HOH . 
T 9 HOH H 2 402 19 HOH HOH . 
T 9 HOH H 3 403 7 HOH HOH . 
T 9 HOH H 4 404 16 HOH HOH . 
T 9 HOH H 5 405 45 HOH HOH . 
T 9 HOH H 6 406 35 HOH HOH . 
T 9 HOH H 7 407 15 HOH HOH . 
T 9 HOH H 8 408 26 HOH HOH . 
T 9 HOH H 9 409 47 HOH HOH . 
T 9 HOH H 10 410 17 HOH HOH . 
T 9 HOH H 11 411 30 HOH HOH . 
T 9 HOH H 12 412 53 HOH HOH . 
T 9 HOH H 13 413 9 HOH HOH . 
T 9 HOH H 14 414 40 HOH HOH . 
T 9 HOH H 15 415 32 HOH HOH . 
T 9 HOH H 16 416 41 HOH HOH . 
T 9 HOH H 17 417 55 HOH HOH . 
T 9 HOH H 18 418 54 HOH HOH . 
T 9 HOH H 19 419 51 HOH HOH . 
T 9 HOH H 20 420 60 HOH HOH . 
T 9 HOH H 21 421 56 HOH HOH . 
T 9 HOH H 22 422 57 HOH HOH . 
U 9 HOH L 1 401 49 HOH HOH . 
U 9 HOH L 2 402 20 HOH HOH . 
U 9 HOH L 3 403 34 HOH HOH . 
U 9 HOH L 4 404 29 HOH HOH . 
U 9 HOH L 5 405 12 HOH HOH . 
U 9 HOH L 6 406 28 HOH HOH . 
U 9 HOH L 7 407 21 HOH HOH . 
U 9 HOH L 8 408 4 HOH HOH . 
U 9 HOH L 9 409 43 HOH HOH . 
U 9 HOH L 10 410 5 HOH HOH . 
U 9 HOH L 11 411 23 HOH HOH . 
U 9 HOH L 12 412 10 HOH HOH . 
U 9 HOH L 13 413 37 HOH HOH . 
U 9 HOH L 14 414 42 HOH HOH . 
U 9 HOH L 15 415 22 HOH HOH . 
U 9 HOH L 16 416 48 HOH HOH . 
U 9 HOH L 17 417 39 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . K 8 -0.169 31.021 -25.02 1 88.95 ? C1 NAG 301 H 1 
HETATM 2 C C2 NAG . . . K 8 0.155 32.125 -24.021 1 78.82 ? C2 NAG 301 H 1 
HETATM 3 C C3 NAG . . . K 8 0.252 33.473 -24.731 1 71.62 ? C3 NAG 301 H 1 
HETATM 4 C C4 NAG . . . K 8 0.499 33.263 -26.218 1 77.93 ? C4 NAG 301 H 1 
HETATM 5 C C5 NAG . . . K 8 -0.705 32.543 -26.832 1 86.66 ? C5 NAG 301 H 1 
HETATM 6 C C6 NAG . . . K 8 -0.417 31.897 -28.171 1 79.36 ? C6 NAG 301 H 1 
HETATM 7 C C7 NAG . . . K 8 -0.549 31.914 -21.685 1 80.13 ? C7 NAG 301 H 1 
HETATM 8 C C8 NAG . . . K 8 -1.695 31.982 -20.715 1 90.13 ? C8 NAG 301 H 1 
HETATM 9 N N2 NAG . . . K 8 -0.844 32.168 -22.964 1 79.53 ? N2 NAG 301 H 1 
HETATM 10 O O3 NAG . . . K 8 1.317 34.236 -24.174 1 71.58 ? O3 NAG 301 H 1 
HETATM 11 O O4 NAG . . . K 8 0.734 34.519 -26.85 1 70.75 ? O4 NAG 301 H 1 
HETATM 12 O O5 NAG . . . K 8 -1.147 31.49 -25.962 1 87.6 ? O5 NAG 301 H 1 
HETATM 13 O O6 NAG . . . K 8 0.794 32.374 -28.748 1 76.44 ? O6 NAG 301 H 1 
HETATM 14 O O7 NAG . . . K 8 0.595 31.644 -21.326 1 74.46 ? O7 NAG 301 H 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#