data_8TQG
#
_model_server_result.job_id            KRQM5kDTBCsb4pVNGyTJeA 
_model_server_result.datetime_utc      '2025-01-25 13:00:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8tqg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1801}' 
#
_entry.id    8TQG 
#
_exptl.entry_id    8TQG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              625.717 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-benzyl-2-{4-[4-(4,5-dimethoxy-1H-indole-2-carbonyl)piperazine-1-carbonyl]piperidin-1-yl}-6-methylpyrimidine-4-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8TQG 
_cell.length_a            66.626 
_cell.length_b            66.626 
_cell.length_c            129.953 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8TQG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    'P 4abw 2nw' 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C34 H39 N7 O5' 
_chem_comp.formula_weight    625.717 
_chem_comp.id                JR0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-benzyl-2-{4-[4-(4,5-dimethoxy-1H-indole-2-carbonyl)piperazine-1-carbonyl]piperidin-1-yl}-6-methylpyrimidine-4-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O02 C01 JR0 sing 173 n n 
C03 O02 JR0 sing 174 n n 
C04 C03 JR0 doub 175 n y 
C06 O05 JR0 sing 176 n n 
O05 C04 JR0 sing 177 n n 
C07 C04 JR0 sing 178 n y 
C08 C07 JR0 doub 179 n y 
C10 N09 JR0 sing 180 n y 
C11 C10 JR0 doub 181 n y 
C12 C10 JR0 sing 182 n n 
O13 C12 JR0 doub 183 n n 
N14 C12 JR0 sing 184 n n 
C15 N14 JR0 sing 185 n n 
C16 C15 JR0 sing 186 n n 
N17 C16 JR0 sing 187 n n 
C19 C18 JR0 sing 188 n n 
C18 N17 JR0 sing 189 n n 
C20 N17 JR0 sing 190 n n 
O21 C20 JR0 doub 191 n n 
C22 C20 JR0 sing 192 n n 
C23 C22 JR0 sing 193 n n 
C24 C23 JR0 sing 194 n n 
N25 C24 JR0 sing 195 n n 
C27 C26 JR0 sing 196 n n 
C26 N25 JR0 sing 197 n n 
C28 N25 JR0 sing 198 n n 
N29 C28 JR0 doub 199 n y 
C30 N29 JR0 sing 200 n y 
C31 C30 JR0 sing 201 n n 
C32 C30 JR0 doub 202 n y 
C33 C32 JR0 sing 203 n y 
N34 C33 JR0 doub 204 n y 
C35 C33 JR0 sing 205 n n 
O36 C35 JR0 doub 206 n n 
N37 C35 JR0 sing 207 n n 
C38 N37 JR0 sing 208 n n 
C39 C38 JR0 sing 209 n n 
C40 C39 JR0 doub 210 n y 
C41 C40 JR0 sing 211 n y 
C42 C41 JR0 doub 212 n y 
C43 C42 JR0 sing 213 n y 
C44 C43 JR0 doub 214 n y 
N09 C08 JR0 sing 215 n y 
C45 C08 JR0 sing 216 n y 
C46 C45 JR0 doub 217 n y 
C03 C46 JR0 sing 218 n y 
C07 C11 JR0 sing 219 n y 
N14 C19 JR0 sing 220 n n 
C22 C27 JR0 sing 221 n n 
C28 N34 JR0 sing 222 n y 
C39 C44 JR0 sing 223 n y 
C15 H151 JR0 sing 224 n n 
C15 H152 JR0 sing 225 n n 
C22 H221 JR0 sing 226 n n 
C24 H242 JR0 sing 227 n n 
C24 H241 JR0 sing 228 n n 
C26 H262 JR0 sing 229 n n 
C26 H261 JR0 sing 230 n n 
C01 H011 JR0 sing 231 n n 
C01 H012 JR0 sing 232 n n 
C01 H013 JR0 sing 233 n n 
C06 H061 JR0 sing 234 n n 
C06 H062 JR0 sing 235 n n 
C06 H063 JR0 sing 236 n n 
C11 H111 JR0 sing 237 n n 
C16 H161 JR0 sing 238 n n 
C16 H162 JR0 sing 239 n n 
C18 H182 JR0 sing 240 n n 
C18 H181 JR0 sing 241 n n 
C19 H191 JR0 sing 242 n n 
C19 H192 JR0 sing 243 n n 
C23 H231 JR0 sing 244 n n 
C23 H232 JR0 sing 245 n n 
C27 H272 JR0 sing 246 n n 
C27 H271 JR0 sing 247 n n 
C31 H313 JR0 sing 248 n n 
C31 H311 JR0 sing 249 n n 
C31 H312 JR0 sing 250 n n 
C32 H321 JR0 sing 251 n n 
C38 H381 JR0 sing 252 n n 
C38 H382 JR0 sing 253 n n 
C40 H401 JR0 sing 254 n n 
C41 H411 JR0 sing 255 n n 
C42 H421 JR0 sing 256 n n 
C43 H431 JR0 sing 257 n n 
C44 H441 JR0 sing 258 n n 
C45 H451 JR0 sing 259 n n 
C46 H461 JR0 sing 260 n n 
N09 H091 JR0 sing 261 n n 
N37 H371 JR0 sing 262 n n 
#
_atom_sites.entry_id                     8TQG 
_atom_sites.fract_transf_matrix[1][1]    0.015009 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015009 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007695 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 JR0 A 1 1801 1801 JR0 LIG . 
C 3 SO4 A 1 1802 1 SO4 SO4 . 
D 3 SO4 A 1 1803 2 SO4 SO4 . 
E 4 HOH A 1 1901 22 HOH HOH . 
E 4 HOH A 2 1902 1 HOH HOH . 
E 4 HOH A 3 1903 21 HOH HOH . 
E 4 HOH A 4 1904 3 HOH HOH . 
E 4 HOH A 5 1905 25 HOH HOH . 
E 4 HOH A 6 1906 17 HOH HOH . 
E 4 HOH A 7 1907 5 HOH HOH . 
E 4 HOH A 8 1908 4 HOH HOH . 
E 4 HOH A 9 1909 9 HOH HOH . 
E 4 HOH A 10 1910 15 HOH HOH . 
E 4 HOH A 11 1911 11 HOH HOH . 
E 4 HOH A 12 1912 10 HOH HOH . 
E 4 HOH A 13 1913 7 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 JR0 . . . B 2 -26.572 10.717 4.703 1 66.89 ? C10 JR0 1801 A 1 
HETATM 2 C C15 JR0 . . . B 2 -26.963 8.926 8.202 1 71.99 ? C15 JR0 1801 A 1 
HETATM 3 C C20 JR0 . . . B 2 -24.779 9.553 10.94 1 73.59 ? C20 JR0 1801 A 1 
HETATM 4 C C22 JR0 . . . B 2 -23.302 9.834 11.138 1 75.27 ? C22 JR0 1801 A 1 
HETATM 5 C C24 JR0 . . . B 2 -21.023 9.057 10.937 1 80.6 ? C24 JR0 1801 A 1 
HETATM 6 C C26 JR0 . . . B 2 -21.716 10.595 12.797 1 80.16 ? C26 JR0 1801 A 1 
HETATM 7 C C28 JR0 . . . B 2 -20.09 8.645 13.331 1 86.47 ? C28 JR0 1801 A 1 
HETATM 8 C C01 JR0 . . . B 2 -24.318 13.237 -1.35 1 80.39 ? C01 JR0 1801 A 1 
HETATM 9 C C03 JR0 . . . B 2 -24.828 12.221 0.699 1 73.1 ? C03 JR0 1801 A 1 
HETATM 10 C C04 JR0 . . . B 2 -24.502 11.373 1.744 1 70.91 ? C04 JR0 1801 A 1 
HETATM 11 C C06 JR0 . . . B 2 -23.368 9.326 1.595 1 62.33 ? C06 JR0 1801 A 1 
HETATM 12 C C07 JR0 . . . B 2 -25.406 11.202 2.831 1 72.25 ? C07 JR0 1801 A 1 
HETATM 13 C C08 JR0 . . . B 2 -26.602 11.875 2.832 1 74 ? C08 JR0 1801 A 1 
HETATM 14 C C11 JR0 . . . B 2 -25.395 10.441 4.03 1 66.17 ? C11 JR0 1801 A 1 
HETATM 15 C C12 JR0 . . . B 2 -27.056 10.062 5.996 1 66.93 ? C12 JR0 1801 A 1 
HETATM 16 C C16 JR0 . . . B 2 -26.813 9.73 9.466 1 73.6 ? C16 JR0 1801 A 1 
HETATM 17 C C18 JR0 . . . B 2 -24.716 10.595 8.599 1 73.12 ? C18 JR0 1801 A 1 
HETATM 18 C C19 JR0 . . . B 2 -24.853 9.733 7.345 1 68.5 ? C19 JR0 1801 A 1 
HETATM 19 C C23 JR0 . . . B 2 -22.493 8.703 10.74 1 78.6 ? C23 JR0 1801 A 1 
HETATM 20 C C27 JR0 . . . B 2 -23.147 10.169 12.532 1 80.01 ? C27 JR0 1801 A 1 
HETATM 21 C C30 JR0 . . . B 2 -19.585 8.102 15.516 1 87.67 ? C30 JR0 1801 A 1 
HETATM 22 C C31 JR0 . . . B 2 -19.692 8.39 17.013 1 88.8 ? C31 JR0 1801 A 1 
HETATM 23 C C32 JR0 . . . B 2 -18.865 7.014 15.048 1 84.37 ? C32 JR0 1801 A 1 
HETATM 24 C C33 JR0 . . . B 2 -18.808 6.81 13.68 1 88.82 ? C33 JR0 1801 A 1 
HETATM 25 C C35 JR0 . . . B 2 -18.045 5.665 13.062 1 86.88 ? C35 JR0 1801 A 1 
HETATM 26 C C38 JR0 . . . B 2 -16.89 4.78 11.027 1 89.3 ? C38 JR0 1801 A 1 
HETATM 27 C C39 JR0 . . . B 2 -15.439 5.234 10.933 1 94.34 ? C39 JR0 1801 A 1 
HETATM 28 C C40 JR0 . . . B 2 -14.691 5.382 12.094 1 93.09 ? C40 JR0 1801 A 1 
HETATM 29 C C41 JR0 . . . B 2 -13.369 5.796 12.028 1 90.83 ? C41 JR0 1801 A 1 
HETATM 30 C C42 JR0 . . . B 2 -12.801 6.064 10.792 1 97.1 ? C42 JR0 1801 A 1 
HETATM 31 C C43 JR0 . . . B 2 -13.553 5.921 9.64 1 95.61 ? C43 JR0 1801 A 1 
HETATM 32 C C44 JR0 . . . B 2 -14.873 5.504 9.699 1 93.13 ? C44 JR0 1801 A 1 
HETATM 33 C C45 JR0 . . . B 2 -26.939 12.739 1.754 1 73.74 ? C45 JR0 1801 A 1 
HETATM 34 C C46 JR0 . . . B 2 -26.045 12.91 0.699 1 73.24 ? C46 JR0 1801 A 1 
HETATM 35 N N09 JR0 . . . B 2 -27.294 11.553 3.963 1 70.31 ? N09 JR0 1801 A 1 
HETATM 36 N N14 JR0 . . . B 2 -26.271 9.579 7.108 1 68.17 ? N14 JR0 1801 A 1 
HETATM 37 N N17 JR0 . . . B 2 -25.408 9.966 9.714 1 75.15 ? N17 JR0 1801 A 1 
HETATM 38 N N25 JR0 . . . B 2 -20.735 9.518 12.362 1 81.27 ? N25 JR0 1801 A 1 
HETATM 39 N N29 JR0 . . . B 2 -20.175 8.884 14.631 1 85.88 ? N29 JR0 1801 A 1 
HETATM 40 N N34 JR0 . . . B 2 -19.416 7.633 12.856 1 85.92 ? N34 JR0 1801 A 1 
HETATM 41 N N37 JR0 . . . B 2 -17.636 5.819 11.693 1 84.6 ? N37 JR0 1801 A 1 
HETATM 42 O O02 JR0 . . . B 2 -23.905 12.367 -0.342 1 78.92 ? O02 JR0 1801 A 1 
HETATM 43 O O05 JR0 . . . B 2 -23.269 10.712 1.707 1 63.29 ? O05 JR0 1801 A 1 
HETATM 44 O O13 JR0 . . . B 2 -28.199 9.806 6.045 1 66.65 ? O13 JR0 1801 A 1 
HETATM 45 O O21 JR0 . . . B 2 -25.412 9.037 11.785 1 67.25 ? O21 JR0 1801 A 1 
HETATM 46 O O36 JR0 . . . B 2 -17.792 4.691 13.681 1 95.86 ? O36 JR0 1801 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           364 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           46 
#