data_8TRG # _model_server_result.job_id h7zEAsEfvorpDREfjnVYeA _model_server_result.datetime_utc '2024-10-24 04:34:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8trg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":402}' # _entry.id 8TRG # _exptl.entry_id 8TRG _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8TRG _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TRG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 11-meric _pdbx_struct_assembly.oligomeric_count 11 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 M N N ? 5 O N N ? 5 Q N N ? 5 S N N ? 5 U N N ? 5 W N N ? 5 Y N N ? 5 AA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 100 A THR 73 1_555 M MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc2 L O2G AGS . A AGS 401 1_555 M MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc3 L O1B AGS . A AGS 401 1_555 M MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? metalc ? metalc4 B OG1 THR 100 B THR 73 1_555 O MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc5 N O2G AGS . B AGS 401 1_555 O MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc6 N O2B AGS . B AGS 401 1_555 O MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? metalc ? metalc7 C OG1 THR 100 C THR 73 1_555 Q MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc8 P O2G AGS . C AGS 401 1_555 Q MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? metalc ? metalc9 P O2B AGS . C AGS 401 1_555 Q MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? metalc ? metalc10 D OG1 THR 100 D THR 73 1_555 S MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc11 R O3B AGS . D AGS 401 1_555 S MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.949 ? metalc ? metalc12 E OG1 THR 100 E THR 73 1_555 U MG MG . E MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? metalc ? metalc13 T O2G AGS . E AGS 401 1_555 U MG MG . E MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? metalc ? metalc14 T O2B AGS . E AGS 401 1_555 U MG MG . E MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc15 T O3B AGS . E AGS 401 1_555 U MG MG . E MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.949 ? metalc ? metalc16 F OG1 THR 100 F THR 73 1_555 W MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc17 V O3B AGS . F AGS 401 1_555 W MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? metalc ? metalc18 G OG1 THR 100 G THR 73 1_555 Y MG MG . G MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc19 X O2G AGS . G AGS 401 1_555 Y MG MG . G MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc20 X O2B AGS . G AGS 401 1_555 Y MG MG . G MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? metalc ? metalc21 Z O2G AGS . H AGS 401 1_555 AA MG MG . H MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc22 Z O2B AGS . H AGS 401 1_555 AA MG MG . H MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? metalc ? metalc23 Z O3B AGS . H AGS 401 1_555 AA MG MG . H MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8TRG _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code L 4 AGS A 1 401 8 AGS ATP . M 5 MG A 1 402 1 MG MG . N 4 AGS B 1 401 7 AGS ATP . O 5 MG B 1 402 2 MG MG . P 4 AGS C 1 401 14 AGS ATP . Q 5 MG C 1 402 8 MG MG . R 4 AGS D 1 401 9 AGS ATP . S 5 MG D 1 402 3 MG MG . T 4 AGS E 1 401 12 AGS ATP . U 5 MG E 1 402 6 MG MG . V 4 AGS F 1 401 13 AGS ATP . W 5 MG F 1 402 7 MG MG . X 4 AGS G 1 401 10 AGS ATP . Y 5 MG G 1 402 4 MG MG . Z 4 AGS H 1 401 11 AGS ATP . AA 5 MG H 1 402 5 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 5 _atom_site.Cartn_x 202.565 _atom_site.Cartn_y 170.353 _atom_site.Cartn_z 121.558 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 65 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #