data_8TSD
#
_model_server_result.job_id            OBLkvXHEQBQim644K5MGxw 
_model_server_result.datetime_utc      '2024-11-28 19:03:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8tsd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1101}' 
#
_entry.id    8TSD 
#
_exptl.entry_id    8TSD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              608.905 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-{(3R,6M)-3-(2-chloro-5-fluorophenyl)-6-[(4S)-5-cyano[1,2,4]triazolo[1,5-a]pyridin-6-yl]-1-oxo-2,3-dihydro-1H-isoindol-4-yl}-3-fluoro-5-(trifluoromethyl)benzamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8TSD 
_cell.length_a            86.902 
_cell.length_b            121.522 
_cell.length_c            192.652 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8TSD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C29 H14 Cl F5 N6 O2' 
_chem_comp.formula_weight    608.905 
_chem_comp.id                XUZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-{(3R,6M)-3-(2-chloro-5-fluorophenyl)-6-[(4S)-5-cyano[1,2,4]triazolo[1,5-a]pyridin-6-yl]-1-oxo-2,3-dihydro-1H-isoindol-4-yl}-3-fluoro-5-(trifluoromethyl)benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     RLY-2608 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C02 F01 XUZ sing 374 n n 
C03 C02 XUZ doub 375 n y 
C04 C03 XUZ sing 376 n y 
C05 C04 XUZ doub 377 n y 
CL06 C05 XUZ sing 378 n n 
C07 C05 XUZ sing 379 n y 
C08 C07 XUZ doub 380 n y 
C09 C07 XUZ sing 381 n n 
N10 C09 XUZ sing 382 n n 
C11 N10 XUZ sing 383 n n 
O12 C11 XUZ doub 384 n n 
C13 C11 XUZ sing 385 n n 
C14 C13 XUZ doub 386 n y 
C15 C14 XUZ sing 387 n y 
C17 C16 XUZ sing 388 n y 
C19 N18 XUZ sing 389 n n 
O20 C19 XUZ doub 390 n n 
C21 C19 XUZ sing 391 n n 
C22 C21 XUZ doub 392 n y 
C23 C22 XUZ sing 393 n y 
F24 C23 XUZ sing 394 n n 
C25 C23 XUZ doub 395 n y 
C26 C25 XUZ sing 396 n y 
C27 C26 XUZ doub 397 n y 
C28 C26 XUZ sing 398 n n 
F29 C28 XUZ sing 399 n n 
F30 C28 XUZ sing 400 n n 
F31 C28 XUZ sing 401 n n 
N18 C17 XUZ sing 402 n n 
C32 C17 XUZ doub 403 n y 
C16 C15 XUZ doub 404 n y 
C33 C15 XUZ sing 405 n n 
C34 C33 XUZ sing 406 n y 
C35 C34 XUZ doub 407 n y 
C36 C35 XUZ sing 408 n y 
N37 C36 XUZ doub 409 n y 
C38 N37 XUZ sing 410 n y 
N39 C38 XUZ doub 411 n y 
N40 N39 XUZ sing 412 n y 
C41 N40 XUZ sing 413 n y 
C42 C41 XUZ sing 414 n n 
N43 C42 XUZ trip 415 n n 
C02 C08 XUZ sing 416 n y 
C09 C32 XUZ sing 417 n n 
C13 C32 XUZ sing 418 n y 
C21 C27 XUZ sing 419 n y 
C33 C41 XUZ doub 420 n y 
C36 N40 XUZ sing 421 n y 
C22 H221 XUZ sing 422 n n 
C03 H031 XUZ sing 423 n n 
C04 H041 XUZ sing 424 n n 
C08 H081 XUZ sing 425 n n 
C09 H091 XUZ sing 426 n n 
C14 H141 XUZ sing 427 n n 
C16 H161 XUZ sing 428 n n 
C25 H251 XUZ sing 429 n n 
C27 H271 XUZ sing 430 n n 
C34 H341 XUZ sing 431 n n 
C35 H351 XUZ sing 432 n n 
C38 H381 XUZ sing 433 n n 
N10 H101 XUZ sing 434 n n 
N18 H181 XUZ sing 435 n n 
#
_atom_sites.entry_id                     8TSD 
_atom_sites.fract_transf_matrix[1][1]    0.011507 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008229 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005191 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          C 
_pdbx_nonpoly_scheme.entity_id        3 
_pdbx_nonpoly_scheme.mon_id           XUZ 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      1101 
_pdbx_nonpoly_scheme.auth_seq_num     1101 
_pdbx_nonpoly_scheme.pdb_mon_id       XUZ 
_pdbx_nonpoly_scheme.auth_mon_id      LIG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 XUZ . . . C 3 17.112 -17.519 -32.513 1 102.76 ? C13 XUZ 1101 A 1 
HETATM 2 C C15 XUZ . . . C 3 15.656 -17.596 -34.503 1 101.17 ? C15 XUZ 1101 A 1 
HETATM 3 C C17 XUZ . . . C 3 15.748 -15.566 -33.068 1 96.52 ? C17 XUZ 1101 A 1 
HETATM 4 C C21 XUZ . . . C 3 14.483 -12.166 -31.339 1 96.58 ? C21 XUZ 1101 A 1 
HETATM 5 C C22 XUZ . . . C 3 14.933 -11.179 -32.224 1 86.02 ? C22 XUZ 1101 A 1 
HETATM 6 C C26 XUZ . . . C 3 13.399 -10.395 -30.038 1 87.96 ? C26 XUZ 1101 A 1 
HETATM 7 C C28 XUZ . . . C 3 12.545 -9.986 -28.809 1 90.45 ? C28 XUZ 1101 A 1 
HETATM 8 C C02 XUZ . . . C 3 19.144 -12.593 -32.517 1 90.11 ? C02 XUZ 1101 A 1 
HETATM 9 C C03 XUZ . . . C 3 19.124 -11.691 -31.447 1 92.11 ? C03 XUZ 1101 A 1 
HETATM 10 C C04 XUZ . . . C 3 18.548 -12.08 -30.241 1 97.32 ? C04 XUZ 1101 A 1 
HETATM 11 C C05 XUZ . . . C 3 17.995 -13.35 -30.089 1 101.8 ? C05 XUZ 1101 A 1 
HETATM 12 C C07 XUZ . . . C 3 18.007 -14.282 -31.127 1 101.78 ? C07 XUZ 1101 A 1 
HETATM 13 C C08 XUZ . . . C 3 18.579 -13.873 -32.347 1 92.17 ? C08 XUZ 1101 A 1 
HETATM 14 C C09 XUZ . . . C 3 17.372 -15.678 -30.933 1 100.39 ? C09 XUZ 1101 A 1 
HETATM 15 C C11 XUZ . . . C 3 18.115 -17.913 -31.423 1 94.78 ? C11 XUZ 1101 A 1 
HETATM 16 C C14 XUZ . . . C 3 16.605 -18.203 -33.629 1 92.06 ? C14 XUZ 1101 A 1 
HETATM 17 C C16 XUZ . . . C 3 15.252 -16.282 -34.201 1 109.62 ? C16 XUZ 1101 A 1 
HETATM 18 C C19 XUZ . . . C 3 14.818 -13.687 -31.529 1 98.14 ? C19 XUZ 1101 A 1 
HETATM 19 C C23 XUZ . . . C 3 14.621 -9.818 -32.026 1 95.91 ? C23 XUZ 1101 A 1 
HETATM 20 C C25 XUZ . . . C 3 13.847 -9.419 -30.923 1 98.18 ? C25 XUZ 1101 A 1 
HETATM 21 C C27 XUZ . . . C 3 13.713 -11.741 -30.244 1 97.38 ? C27 XUZ 1101 A 1 
HETATM 22 C C32 XUZ . . . C 3 16.684 -16.202 -32.237 1 95.87 ? C32 XUZ 1101 A 1 
HETATM 23 C C33 XUZ . . . C 3 15.112 -18.346 -35.717 1 112.75 ? C33 XUZ 1101 A 1 
HETATM 24 C C34 XUZ . . . C 3 16.041 -19.003 -36.612 1 118.84 ? C34 XUZ 1101 A 1 
HETATM 25 C C35 XUZ . . . C 3 15.63 -19.692 -37.717 1 128.17 ? C35 XUZ 1101 A 1 
HETATM 26 C C36 XUZ . . . C 3 14.241 -19.777 -38.04 1 116.72 ? C36 XUZ 1101 A 1 
HETATM 27 C C38 XUZ . . . C 3 12.217 -20.101 -38.804 1 118.4 ? C38 XUZ 1101 A 1 
HETATM 28 C C41 XUZ . . . C 3 13.751 -18.421 -36.02 1 115.54 ? C41 XUZ 1101 A 1 
HETATM 29 C C42 XUZ . . . C 3 12.745 -17.803 -35.199 1 114.4 ? C42 XUZ 1101 A 1 
HETATM 30 F F01 XUZ . . . C 3 19.695 -12.217 -33.666 1 93.65 ? F01 XUZ 1101 A 1 
HETATM 31 F F24 XUZ . . . C 3 15.061 -8.904 -32.887 1 95.09 ? F24 XUZ 1101 A 1 
HETATM 32 F F29 XUZ . . . C 3 13.248 -9.396 -27.829 1 92.64 ? F29 XUZ 1101 A 1 
HETATM 33 F F30 XUZ . . . C 3 11.569 -9.12 -29.109 1 104.11 ? F30 XUZ 1101 A 1 
HETATM 34 F F31 XUZ . . . C 3 11.92 -11.019 -28.23 1 93.52 ? F31 XUZ 1101 A 1 
HETATM 35 N N10 XUZ . . . C 3 18.258 -16.813 -30.549 1 109.35 ? N10 XUZ 1101 A 1 
HETATM 36 N N18 XUZ . . . C 3 15.348 -14.194 -32.753 1 95.12 ? N18 XUZ 1101 A 1 
HETATM 37 N N37 XUZ . . . C 3 13.565 -20.385 -39.063 1 122.87 ? N37 XUZ 1101 A 1 
HETATM 38 N N39 XUZ . . . C 3 12.029 -19.346 -37.669 1 124.59 ? N39 XUZ 1101 A 1 
HETATM 39 N N40 XUZ . . . C 3 13.312 -19.134 -37.174 1 110.78 ? N40 XUZ 1101 A 1 
HETATM 40 N N43 XUZ . . . C 3 11.939 -17.302 -34.537 1 123.6 ? N43 XUZ 1101 A 1 
HETATM 41 O O12 XUZ . . . C 3 18.74 -18.95 -31.261 1 100.96 ? O12 XUZ 1101 A 1 
HETATM 42 O O20 XUZ . . . C 3 14.628 -14.474 -30.621 1 101.41 ? O20 XUZ 1101 A 1 
HETATM 43 CL CL06 XUZ . . . C 3 17.283 -13.764 -28.519 1 175.88 ? CL06 XUZ 1101 A 1 
HETATM 44 H H221 XUZ . . . C 3 15.449 -11.407 -32.962 1 103.7 ? H221 XUZ 1101 A 1 
HETATM 45 H H031 XUZ . . . C 3 19.49 -10.842 -31.539 1 111.02 ? H031 XUZ 1101 A 1 
HETATM 46 H H041 XUZ . . . C 3 18.536 -11.481 -29.532 1 117.27 ? H041 XUZ 1101 A 1 
HETATM 47 H H081 XUZ . . . C 3 18.585 -14.465 -33.062 1 111.09 ? H081 XUZ 1101 A 1 
HETATM 48 H H091 XUZ . . . C 3 16.78 -15.607 -30.208 1 120.96 ? H091 XUZ 1101 A 1 
HETATM 49 H H141 XUZ . . . C 3 16.879 -19.07 -33.822 1 110.96 ? H141 XUZ 1101 A 1 
HETATM 50 H H161 XUZ . . . C 3 14.64 -15.858 -34.757 1 132.03 ? H161 XUZ 1101 A 1 
HETATM 51 H H251 XUZ . . . C 3 13.64 -8.524 -30.788 1 118.31 ? H251 XUZ 1101 A 1 
HETATM 52 H H271 XUZ . . . C 3 13.396 -12.362 -29.629 1 117.34 ? H271 XUZ 1101 A 1 
HETATM 53 H H341 XUZ . . . C 3 16.955 -18.967 -36.446 1 143.09 ? H341 XUZ 1101 A 1 
HETATM 54 H H351 XUZ . . . C 3 16.237 -20.116 -38.278 1 154.29 ? H351 XUZ 1101 A 1 
HETATM 55 H H381 XUZ . . . C 3 11.513 -20.388 -39.339 1 142.57 ? H381 XUZ 1101 A 1 
HETATM 56 H H101 XUZ . . . C 3 18.8 -16.804 -29.871 1 131.7 ? H101 XUZ 1101 A 1 
HETATM 57 H H181 XUZ . . . C 3 15.719 -13.553 -33.206 1 114.63 ? H181 XUZ 1101 A 1 
#
_model_server_stats.io_time_ms              262 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           57 
#