data_8TU9 # _model_server_result.job_id 4j4wE3NoH2CPM6aXQjMz6g _model_server_result.datetime_utc '2024-12-26 18:40:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tu9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 8TU9 # _exptl.entry_id 8TU9 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8TU9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TU9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 344 A CYS 76 1_555 A SG CYS 347 A CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 602 A CYS 334 1_555 B SG CYS 602 B CYS 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf3 A SG CYS 683 A CYS 415 1_555 A SG CYS 702 A CYS 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf4 B SG CYS 344 B CYS 76 1_555 B SG CYS 347 B CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 B SG CYS 683 B CYS 415 1_555 B SG CYS 702 B CYS 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? covale ? covale1 A ND2 ASN 382 A ASN 114 1_555 F C1 NAG . A NAG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.467 ? covale ? covale2 A ND2 ASN 402 A ASN 134 1_555 D C1 NAG . A NAG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale3 A ND2 ASN 701 A ASN 433 1_555 E C1 NAG . A NAG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale4 B ND2 ASN 382 B ASN 114 1_555 J C1 NAG . B NAG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.466 ? covale ? covale5 B ND2 ASN 402 B ASN 134 1_555 H C1 NAG . B NAG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale6 B ND2 ASN 701 B ASN 433 1_555 I C1 NAG . B NAG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 8TU9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACO A 1 701 701 ACO ACO . D 3 NAG A 1 702 702 NAG NAG . E 3 NAG A 1 703 703 NAG NAG . F 3 NAG A 1 704 704 NAG NAG . G 2 ACO B 1 701 701 ACO ACO . H 3 NAG B 1 702 702 NAG NAG . I 3 NAG B 1 703 703 NAG NAG . J 3 NAG B 1 704 704 NAG NAG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . C 2 157.429 173.749 169.157 1 12.22 ? N1A ACO 701 A 1 HETATM 2 C C2A ACO . . . C 2 158.449 173.04 169.652 1 12.22 ? C2A ACO 701 A 1 HETATM 3 N N3A ACO . . . C 2 159.139 172.055 169.073 1 12.22 ? N3A ACO 701 A 1 HETATM 4 C C4A ACO . . . C 2 158.687 171.808 167.839 1 12.22 ? C4A ACO 701 A 1 HETATM 5 C C5A ACO . . . C 2 157.646 172.453 167.193 1 12.22 ? C5A ACO 701 A 1 HETATM 6 C C6A ACO . . . C 2 156.993 173.476 167.907 1 12.22 ? C6A ACO 701 A 1 HETATM 7 N N6A ACO . . . C 2 155.972 174.188 167.42 1 12.22 ? N6A ACO 701 A 1 HETATM 8 N N7A ACO . . . C 2 157.457 171.93 165.923 1 12.22 ? N7A ACO 701 A 1 HETATM 9 C C8A ACO . . . C 2 158.374 170.997 165.833 1 12.22 ? C8A ACO 701 A 1 HETATM 10 N N9A ACO . . . C 2 159.152 170.867 166.954 1 12.22 ? N9A ACO 701 A 1 HETATM 11 C C1B ACO . . . C 2 160.25 169.931 167.168 1 12.22 ? C1B ACO 701 A 1 HETATM 12 C C2B ACO . . . C 2 159.819 168.483 167.386 1 12.22 ? C2B ACO 701 A 1 HETATM 13 O O2B ACO . . . C 2 159.462 168.262 168.746 1 12.22 ? O2B ACO 701 A 1 HETATM 14 C C3B ACO . . . C 2 161.123 167.768 167.039 1 12.22 ? C3B ACO 701 A 1 HETATM 15 O O3B ACO . . . C 2 162.011 167.822 168.177 1 12.22 ? O3B ACO 701 A 1 HETATM 16 P P3B ACO . . . C 2 162.517 166.509 168.878 1 12.22 ? P3B ACO 701 A 1 HETATM 17 O O7A ACO . . . C 2 162.711 165.472 167.826 1 12.22 ? O7A ACO 701 A 1 HETATM 18 O O8A ACO . . . C 2 161.469 166.112 169.918 1 12.22 ? O8A ACO 701 A 1 HETATM 19 O O9A ACO . . . C 2 163.812 166.856 169.618 1 12.22 ? O9A ACO 701 A 1 HETATM 20 C C4B ACO . . . C 2 161.702 168.613 165.903 1 12.22 ? C4B ACO 701 A 1 HETATM 21 O O4B ACO . . . C 2 161.064 169.916 166.013 1 12.22 ? O4B ACO 701 A 1 HETATM 22 C C5B ACO . . . C 2 161.49 168.055 164.518 1 12.22 ? C5B ACO 701 A 1 HETATM 23 O O5B ACO . . . C 2 160.508 168.847 163.819 1 12.22 ? O5B ACO 701 A 1 HETATM 24 P P1A ACO . . . C 2 159.427 168.173 162.887 1 12.22 ? P1A ACO 701 A 1 HETATM 25 O O1A ACO . . . C 2 158.142 168.001 163.593 1 12.22 ? O1A ACO 701 A 1 HETATM 26 O O2A ACO . . . C 2 160.015 166.876 162.337 1 12.22 ? O2A ACO 701 A 1 HETATM 27 O O3A ACO . . . C 2 159.297 169.18 161.661 1 12.22 ? O3A ACO 701 A 1 HETATM 28 P P2A ACO . . . C 2 160.076 170.456 161.111 1 12.22 ? P2A ACO 701 A 1 HETATM 29 O O4A ACO . . . C 2 159.452 171.713 161.57 1 12.22 ? O4A ACO 701 A 1 HETATM 30 O O5A ACO . . . C 2 161.546 170.293 161.496 1 12.22 ? O5A ACO 701 A 1 HETATM 31 O O6A ACO . . . C 2 159.946 170.301 159.543 1 12.22 ? O6A ACO 701 A 1 HETATM 32 C CBP ACO . . . C 2 160.287 168.32 158.168 1 12.22 ? CBP ACO 701 A 1 HETATM 33 C CCP ACO . . . C 2 160.913 169.321 159.134 1 12.22 ? CCP ACO 701 A 1 HETATM 34 C CDP ACO . . . C 2 161.409 167.665 157.355 1 12.22 ? CDP ACO 701 A 1 HETATM 35 C CEP ACO . . . C 2 159.557 167.245 158.981 1 12.22 ? CEP ACO 701 A 1 HETATM 36 C CAP ACO . . . C 2 159.284 169.025 157.215 1 12.22 ? CAP ACO 701 A 1 HETATM 37 O OAP ACO . . . C 2 159.728 170.331 156.887 1 12.22 ? OAP ACO 701 A 1 HETATM 38 C C9P ACO . . . C 2 158.946 168.248 155.948 1 12.22 ? C9P ACO 701 A 1 HETATM 39 O O9P ACO . . . C 2 158.177 167.294 156.001 1 12.22 ? O9P ACO 701 A 1 HETATM 40 N N8P ACO . . . C 2 159.501 168.66 154.808 1 12.22 ? N8P ACO 701 A 1 HETATM 41 C C7P ACO . . . C 2 159.26 167.991 153.538 1 12.22 ? C7P ACO 701 A 1 HETATM 42 C C6P ACO . . . C 2 159.013 168.971 152.411 1 12.22 ? C6P ACO 701 A 1 HETATM 43 C C5P ACO . . . C 2 157.541 169.249 152.214 1 12.22 ? C5P ACO 701 A 1 HETATM 44 O O5P ACO . . . C 2 156.692 168.587 152.803 1 12.22 ? O5P ACO 701 A 1 HETATM 45 N N4P ACO . . . C 2 157.226 170.225 151.36 1 12.22 ? N4P ACO 701 A 1 HETATM 46 C C3P ACO . . . C 2 158.209 171.023 150.639 1 12.22 ? C3P ACO 701 A 1 HETATM 47 C C2P ACO . . . C 2 158.09 170.85 149.137 1 12.22 ? C2P ACO 701 A 1 HETATM 48 S S1P ACO . . . C 2 157.313 172.331 148.425 1 12.22 ? S1P ACO 701 A 1 HETATM 49 C C ACO . . . C 2 156.778 171.721 146.857 1 12.22 ? C ACO 701 A 1 HETATM 50 O O ACO . . . C 2 156.646 170.552 146.622 1 12.22 ? O ACO 701 A 1 HETATM 51 C CH3 ACO . . . C 2 156.504 172.815 145.868 1 12.22 ? CH3 ACO 701 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 51 #