data_8TUP # _model_server_result.job_id x9cgXxxj3xVdF691lMIOlg _model_server_result.datetime_utc '2025-07-08 15:28:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tup # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 8TUP # _exptl.entry_id 8TUP _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8TUP _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TUP _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8TUP _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 MG A 1 501 3 MG MG . G 2 MG A 1 502 4 MG MG . H 2 MG B 1 501 2 MG MG . I 3 HOH A 1 601 602 HOH HOH . I 3 HOH A 2 602 627 HOH HOH . I 3 HOH A 3 603 601 HOH HOH . I 3 HOH A 4 604 614 HOH HOH . I 3 HOH A 5 605 612 HOH HOH . I 3 HOH A 6 606 624 HOH HOH . I 3 HOH A 7 607 5 HOH HOH . I 3 HOH A 8 608 617 HOH HOH . I 3 HOH A 9 609 604 HOH HOH . I 3 HOH A 10 610 618 HOH HOH . I 3 HOH A 11 611 603 HOH HOH . I 3 HOH A 12 612 622 HOH HOH . I 3 HOH A 13 613 613 HOH HOH . I 3 HOH A 14 614 605 HOH HOH . J 3 HOH B 1 601 602 HOH HOH . J 3 HOH B 2 602 627 HOH HOH . J 3 HOH B 3 603 601 HOH HOH . J 3 HOH B 4 604 614 HOH HOH . J 3 HOH B 5 605 612 HOH HOH . J 3 HOH B 6 606 624 HOH HOH . J 3 HOH B 7 607 617 HOH HOH . J 3 HOH B 8 608 604 HOH HOH . J 3 HOH B 9 609 618 HOH HOH . J 3 HOH B 10 610 603 HOH HOH . J 3 HOH B 11 611 622 HOH HOH . J 3 HOH B 12 612 613 HOH HOH . J 3 HOH B 13 613 605 HOH HOH . K 3 HOH C 1 501 602 HOH HOH . K 3 HOH C 2 502 627 HOH HOH . K 3 HOH C 3 503 601 HOH HOH . K 3 HOH C 4 504 614 HOH HOH . K 3 HOH C 5 505 612 HOH HOH . K 3 HOH C 6 506 624 HOH HOH . K 3 HOH C 7 507 617 HOH HOH . K 3 HOH C 8 508 604 HOH HOH . K 3 HOH C 9 509 618 HOH HOH . K 3 HOH C 10 510 603 HOH HOH . K 3 HOH C 11 511 622 HOH HOH . K 3 HOH C 12 512 613 HOH HOH . K 3 HOH C 13 513 605 HOH HOH . L 3 HOH D 1 501 602 HOH HOH . L 3 HOH D 2 502 627 HOH HOH . L 3 HOH D 3 503 601 HOH HOH . L 3 HOH D 4 504 614 HOH HOH . L 3 HOH D 5 505 612 HOH HOH . L 3 HOH D 6 506 624 HOH HOH . L 3 HOH D 7 507 617 HOH HOH . L 3 HOH D 8 508 604 HOH HOH . L 3 HOH D 9 509 618 HOH HOH . L 3 HOH D 10 510 603 HOH HOH . L 3 HOH D 11 511 622 HOH HOH . L 3 HOH D 12 512 613 HOH HOH . L 3 HOH D 13 513 605 HOH HOH . M 3 HOH E 1 501 602 HOH HOH . M 3 HOH E 2 502 627 HOH HOH . M 3 HOH E 3 503 601 HOH HOH . M 3 HOH E 4 504 614 HOH HOH . M 3 HOH E 5 505 612 HOH HOH . M 3 HOH E 6 506 624 HOH HOH . M 3 HOH E 7 507 617 HOH HOH . M 3 HOH E 8 508 604 HOH HOH . M 3 HOH E 9 509 618 HOH HOH . M 3 HOH E 10 510 603 HOH HOH . M 3 HOH E 11 511 622 HOH HOH . M 3 HOH E 12 512 613 HOH HOH . M 3 HOH E 13 513 605 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 132.798 _atom_site.Cartn_y 132.807 _atom_site.Cartn_z 172.875 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #