data_8TVI # _model_server_result.job_id 9bUMCDEBYJ_zwwv8Yl1oLQ _model_server_result.datetime_utc '2024-11-16 07:41:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tvi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":702}' # _entry.id 8TVI # _exptl.entry_id 8TVI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 180 A CYS 188 1_555 A SG CYS 596 A CYS 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 211 A CYS 219 1_555 A SG CYS 235 A CYS 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf3 A SG CYS 277 A CYS 285 1_555 A SG CYS 290 A CYS 298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 A SG CYS 371 A CYS 379 1_555 A SG CYS 388 A CYS 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf5 A SG CYS 376 A CYS 384 1_555 A SG CYS 494 A CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 A SG CYS 486 A CYS 494 1_555 A SG CYS 498 A CYS 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf7 A SG CYS 560 A CYS 568 1_555 A SG CYS 569 A CYS 577 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf8 B SG CYS 180 B CYS 188 1_555 B SG CYS 596 B CYS 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf9 B SG CYS 211 B CYS 219 1_555 B SG CYS 235 B CYS 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf10 B SG CYS 277 B CYS 285 1_555 B SG CYS 290 B CYS 298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf11 B SG CYS 371 B CYS 379 1_555 B SG CYS 388 B CYS 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf12 B SG CYS 376 B CYS 384 1_555 B SG CYS 494 B CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf13 B SG CYS 486 B CYS 494 1_555 B SG CYS 498 B CYS 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf14 B SG CYS 560 B CYS 568 1_555 B SG CYS 569 B CYS 577 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf15 C SG CYS 180 C CYS 188 1_555 C SG CYS 596 C CYS 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf16 C SG CYS 211 C CYS 219 1_555 C SG CYS 235 C CYS 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf17 C SG CYS 277 C CYS 285 1_555 C SG CYS 290 C CYS 298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf18 C SG CYS 371 C CYS 379 1_555 C SG CYS 388 C CYS 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf19 C SG CYS 376 C CYS 384 1_555 C SG CYS 494 C CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf20 C SG CYS 486 C CYS 494 1_555 C SG CYS 498 C CYS 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf21 C SG CYS 560 C CYS 568 1_555 C SG CYS 569 C CYS 577 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf22 D SG CYS 180 D CYS 188 1_555 D SG CYS 596 D CYS 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf23 D SG CYS 211 D CYS 219 1_555 D SG CYS 235 D CYS 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf24 D SG CYS 277 D CYS 285 1_555 D SG CYS 290 D CYS 298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf25 D SG CYS 371 D CYS 379 1_555 D SG CYS 388 D CYS 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf26 D SG CYS 376 D CYS 384 1_555 D SG CYS 494 D CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf27 D SG CYS 486 D CYS 494 1_555 D SG CYS 498 D CYS 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf28 D SG CYS 560 D CYS 568 1_555 D SG CYS 569 D CYS 577 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? covale ? covale1 A ND2 ASN 181 A ASN 189 1_555 E C1 NAG . A NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.494 ? covale ? covale2 B ND2 ASN 181 B ASN 189 1_555 G C1 NAG . B NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.494 ? covale ? covale3 C ND2 ASN 181 C ASN 189 1_555 I C1 NAG . C NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.494 ? covale ? covale4 D ND2 ASN 181 D ASN 189 1_555 K C1 NAG . D NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.494 ? metalc ? metalc1 A NE2 HIS 186 A HIS 194 1_555 F ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc2 A OD2 ASP 536 A ASP 544 1_555 F ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? metalc ? metalc3 A ND1 HIS 540 A HIS 548 1_555 F ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc4 B NE2 HIS 186 B HIS 194 1_555 H ZN ZN . B ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc5 B OD2 ASP 536 B ASP 544 1_555 H ZN ZN . B ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? metalc ? metalc6 B ND1 HIS 540 B HIS 548 1_555 H ZN ZN . B ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc7 C NE2 HIS 186 C HIS 194 1_555 J ZN ZN . C ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc8 C OD2 ASP 536 C ASP 544 1_555 J ZN ZN . C ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? metalc ? metalc9 C ND1 HIS 540 C HIS 548 1_555 J ZN ZN . C ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc10 D NE2 HIS 186 D HIS 194 1_555 L ZN ZN . D ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc11 D OD2 ASP 536 D ASP 544 1_555 L ZN ZN . D ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? metalc ? metalc12 D ND1 HIS 540 D HIS 548 1_555 L ZN ZN . D ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8TVI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAG A 1 701 608 NAG NAG . F 3 ZN A 1 702 1 ZN ZN . G 2 NAG B 1 701 608 NAG NAG . H 3 ZN B 1 702 2 ZN ZN . I 2 NAG C 1 701 608 NAG NAG . J 3 ZN C 1 702 3 ZN ZN . K 2 NAG D 1 701 608 NAG NAG . L 3 ZN D 1 702 4 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 234.353 _atom_site.Cartn_y 178.43 _atom_site.Cartn_z 165.763 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 702 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #