data_8TWN # _model_server_result.job_id 5Eaq1mnBRa81n3omiNfsAg _model_server_result.datetime_utc '2025-01-05 13:19:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8twn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 8TWN # _exptl.entry_id 8TWN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 134.087 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-MALATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8TWN _cell.length_a 101.554 _cell.length_b 101.554 _cell.length_c 129.094 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TWN _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall 'P 65 2 (x,y,z+1/12)' _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 20 A HIS -1 1_555 A N MSE 21 A MSE 0 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 21 A MSE 0 1_555 A N MSE 22 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C MSE 22 A MSE 1 1_555 A N LYS 23 A LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale4 A C THR 116 A THR 95 1_555 A N MSE 117 A MSE 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C MSE 117 A MSE 96 1_555 A N ARG 118 A ARG 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale6 A C VAL 151 A VAL 130 1_555 A N MSE 152 A MSE 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 A C MSE 152 A MSE 131 1_555 A N LYS 153 A LYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale8 A C LYS 153 A LYS 132 1_555 A N MSE 154 A MSE 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale9 A C MSE 154 A MSE 133 1_555 A N VAL 155 A VAL 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale10 A C ALA 159 A ALA 138 1_555 A N MSE 160 A MSE 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale11 A C MSE 160 A MSE 139 1_555 A N GLU 161 A GLU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'C4 H6 O5' _chem_comp.formula_weight 134.087 _chem_comp.id MLT _chem_comp.mon_nstd_flag . _chem_comp.name D-MALATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(2R)-2-HYDROXYBUTANEDIOIC ACID;2-HYDROXY-SUCCINIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MLT doub 246 n n C1 O2 MLT sing 247 n n C1 C2 MLT sing 248 n n C2 O3 MLT sing 249 n n C2 C3 MLT sing 250 n n C2 H2 MLT sing 251 n n O3 HO3 MLT sing 252 n n C3 C4 MLT sing 253 n n C3 H31 MLT sing 254 n n C3 H32 MLT sing 255 n n C4 O4 MLT doub 256 n n C4 O5 MLT sing 257 n n O5 HO5 MLT sing 258 n n O2 H6 MLT sing 259 n n # _atom_sites.entry_id 8TWN _atom_sites.fract_transf_matrix[1][1] 0.009847 _atom_sites.fract_transf_matrix[1][2] 0.005685 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01137 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007746 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 67I A 1 301 282 67I NYR . C 3 MLT A 1 302 283 MLT MLT . D 4 HOH A 1 401 91 HOH HOH . D 4 HOH A 2 402 69 HOH HOH . D 4 HOH A 3 403 17 HOH HOH . D 4 HOH A 4 404 88 HOH HOH . D 4 HOH A 5 405 65 HOH HOH . D 4 HOH A 6 406 76 HOH HOH . D 4 HOH A 7 407 56 HOH HOH . D 4 HOH A 8 408 79 HOH HOH . D 4 HOH A 9 409 11 HOH HOH . D 4 HOH A 10 410 41 HOH HOH . D 4 HOH A 11 411 86 HOH HOH . D 4 HOH A 12 412 77 HOH HOH . D 4 HOH A 13 413 5 HOH HOH . D 4 HOH A 14 414 36 HOH HOH . D 4 HOH A 15 415 44 HOH HOH . D 4 HOH A 16 416 35 HOH HOH . D 4 HOH A 17 417 40 HOH HOH . D 4 HOH A 18 418 87 HOH HOH . D 4 HOH A 19 419 81 HOH HOH . D 4 HOH A 20 420 84 HOH HOH . D 4 HOH A 21 421 52 HOH HOH . D 4 HOH A 22 422 32 HOH HOH . D 4 HOH A 23 423 96 HOH HOH . D 4 HOH A 24 424 61 HOH HOH . D 4 HOH A 25 425 71 HOH HOH . D 4 HOH A 26 426 7 HOH HOH . D 4 HOH A 27 427 64 HOH HOH . D 4 HOH A 28 428 48 HOH HOH . D 4 HOH A 29 429 50 HOH HOH . D 4 HOH A 30 430 22 HOH HOH . D 4 HOH A 31 431 33 HOH HOH . D 4 HOH A 32 432 82 HOH HOH . D 4 HOH A 33 433 92 HOH HOH . D 4 HOH A 34 434 25 HOH HOH . D 4 HOH A 35 435 55 HOH HOH . D 4 HOH A 36 436 10 HOH HOH . D 4 HOH A 37 437 98 HOH HOH . D 4 HOH A 38 438 13 HOH HOH . D 4 HOH A 39 439 37 HOH HOH . D 4 HOH A 40 440 75 HOH HOH . D 4 HOH A 41 441 38 HOH HOH . D 4 HOH A 42 442 58 HOH HOH . D 4 HOH A 43 443 20 HOH HOH . D 4 HOH A 44 444 16 HOH HOH . D 4 HOH A 45 445 66 HOH HOH . D 4 HOH A 46 446 31 HOH HOH . D 4 HOH A 47 447 30 HOH HOH . D 4 HOH A 48 448 9 HOH HOH . D 4 HOH A 49 449 3 HOH HOH . D 4 HOH A 50 450 24 HOH HOH . D 4 HOH A 51 451 54 HOH HOH . D 4 HOH A 52 452 89 HOH HOH . D 4 HOH A 53 453 70 HOH HOH . D 4 HOH A 54 454 45 HOH HOH . D 4 HOH A 55 455 46 HOH HOH . D 4 HOH A 56 456 18 HOH HOH . D 4 HOH A 57 457 47 HOH HOH . D 4 HOH A 58 458 95 HOH HOH . D 4 HOH A 59 459 49 HOH HOH . D 4 HOH A 60 460 19 HOH HOH . D 4 HOH A 61 461 26 HOH HOH . D 4 HOH A 62 462 42 HOH HOH . D 4 HOH A 63 463 12 HOH HOH . D 4 HOH A 64 464 62 HOH HOH . D 4 HOH A 65 465 34 HOH HOH . D 4 HOH A 66 466 6 HOH HOH . D 4 HOH A 67 467 15 HOH HOH . D 4 HOH A 68 468 60 HOH HOH . D 4 HOH A 69 469 4 HOH HOH . D 4 HOH A 70 470 85 HOH HOH . D 4 HOH A 71 471 21 HOH HOH . D 4 HOH A 72 472 8 HOH HOH . D 4 HOH A 73 473 94 HOH HOH . D 4 HOH A 74 474 78 HOH HOH . D 4 HOH A 75 475 90 HOH HOH . D 4 HOH A 76 476 14 HOH HOH . D 4 HOH A 77 477 51 HOH HOH . D 4 HOH A 78 478 28 HOH HOH . D 4 HOH A 79 479 80 HOH HOH . D 4 HOH A 80 480 1 HOH HOH . D 4 HOH A 81 481 67 HOH HOH . D 4 HOH A 82 482 23 HOH HOH . D 4 HOH A 83 483 93 HOH HOH . D 4 HOH A 84 484 39 HOH HOH . D 4 HOH A 85 485 53 HOH HOH . D 4 HOH A 86 486 63 HOH HOH . D 4 HOH A 87 487 59 HOH HOH . D 4 HOH A 88 488 2 HOH HOH . D 4 HOH A 89 489 57 HOH HOH . D 4 HOH A 90 490 43 HOH HOH . D 4 HOH A 91 491 97 HOH HOH . D 4 HOH A 92 492 29 HOH HOH . D 4 HOH A 93 493 27 HOH HOH . D 4 HOH A 94 494 73 HOH HOH . D 4 HOH A 95 495 68 HOH HOH . D 4 HOH A 96 496 74 HOH HOH . D 4 HOH A 97 497 72 HOH HOH . D 4 HOH A 98 498 83 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MLT . . . C 3 52.738 -24.112 -27.034 1 51.79 ? C1 MLT 302 A 1 HETATM 2 O O1 MLT . . . C 3 53.006 -23.182 -27.827 1 72.8 ? O1 MLT 302 A 1 HETATM 3 O O2 MLT . . . C 3 53.53 -24.371 -26.102 1 59.97 ? O2 MLT 302 A 1 HETATM 4 C C2 MLT . . . C 3 51.477 -24.916 -27.143 1 48.84 ? C2 MLT 302 A 1 HETATM 5 O O3 MLT . . . C 3 51.302 -25.439 -25.849 1 46.09 ? O3 MLT 302 A 1 HETATM 6 C C3 MLT . . . C 3 51.582 -26.087 -28.133 1 47.84 ? C3 MLT 302 A 1 HETATM 7 C C4 MLT . . . C 3 50.31 -26.928 -28.104 1 51.12 ? C4 MLT 302 A 1 HETATM 8 O O4 MLT . . . C 3 49.186 -26.388 -28.255 1 45.32 ? O4 MLT 302 A 1 HETATM 9 O O5 MLT . . . C 3 50.356 -28.177 -27.927 1 58.31 ? O5 MLT 302 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 9 #