data_8TWT
#
_model_server_result.job_id            aESDHAr3l-Sijk6YaDQeBA 
_model_server_result.datetime_utc      '2025-01-07 05:51:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8twt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":302}' 
#
_entry.id    8TWT 
#
_exptl.entry_id    8TWT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              134.087 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            D-MALATE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8TWT 
_cell.length_a            65.916 
_cell.length_b            86.089 
_cell.length_c            101.779 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8TWT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A ND1 HIS 100 A HIS 79 1_555 F FE FE . A FE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc2 A NE2 HIS 193 A HIS 172 1_555 F FE FE . A FE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
metalc ? metalc3 A OE2 GLU 197 A GLU 176 1_555 F FE FE . A FE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? 
metalc ? metalc4 C O 67I . A 67I 301 1_555 F FE FE . A FE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? 
metalc ? metalc5 C N 67I . A 67I 301 1_555 F FE FE . A FE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
metalc ? metalc6 F FE FE . A FE 304 1_555 L O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? 
metalc ? metalc7 B OD1 ASP 97 B ASP 76 1_555 K FE FE . B FE 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc8 B ND1 HIS 100 B HIS 79 1_555 J FE FE . B FE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc9 B OE1 GLU 161 B GLU 140 1_555 K FE FE . B FE 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? 
metalc ? metalc10 B NE2 HIS 193 B HIS 172 1_555 J FE FE . B FE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? 
metalc ? metalc11 B OE2 GLU 197 B GLU 176 1_555 J FE FE . B FE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
metalc ? metalc12 B OE1 GLU 197 B GLU 176 1_555 K FE FE . B FE 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc13 G OXT 67I . B 67I 301 1_555 J FE FE . B FE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc14 G N 67I . B 67I 301 1_555 J FE FE . B FE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc15 J FE FE . B FE 304 1_555 M O HOH . B HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? 
metalc ? metalc16 K FE FE . B FE 305 1_555 M O HOH . B HOH 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? 
#
_chem_comp.formula           'C4 H6 O5' 
_chem_comp.formula_weight    134.087 
_chem_comp.id                MLT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              D-MALATE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '(2R)-2-HYDROXYBUTANEDIOIC ACID;2-HYDROXY-SUCCINIC ACID' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 MLT doub 278 n n 
C1 O2 MLT sing 279 n n 
C1 C2 MLT sing 280 n n 
C2 O3 MLT sing 281 n n 
C2 C3 MLT sing 282 n n 
C2 H2 MLT sing 283 n n 
O3 HO3 MLT sing 284 n n 
C3 C4 MLT sing 285 n n 
C3 H31 MLT sing 286 n n 
C3 H32 MLT sing 287 n n 
C4 O4 MLT doub 288 n n 
C4 O5 MLT sing 289 n n 
O5 HO5 MLT sing 290 n n 
O2 H6 MLT sing 291 n n 
#
_atom_sites.entry_id                     8TWT 
_atom_sites.fract_transf_matrix[1][1]    0.015171 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011616 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009825 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 67I A 1 301 282 67I NYR . 
D 3 MLT A 1 302 286 MLT MLT . 
E 4 SIN A 1 303 287 SIN SIN . 
F 5 FE A 1 304 3 FE FE . 
G 2 67I B 1 301 283 67I NYR . 
H 3 MLT B 1 302 289 MLT MLT . 
I 6 GOL B 1 303 290 GOL GOL . 
J 5 FE B 1 304 1 FE FE . 
K 5 FE B 1 305 2 FE FE . 
L 7 HOH A 1 401 114 HOH HOH . 
L 7 HOH A 2 402 38 HOH HOH . 
L 7 HOH A 3 403 125 HOH HOH . 
L 7 HOH A 4 404 45 HOH HOH . 
L 7 HOH A 5 405 29 HOH HOH . 
L 7 HOH A 6 406 129 HOH HOH . 
L 7 HOH A 7 407 71 HOH HOH . 
L 7 HOH A 8 408 172 HOH HOH . 
L 7 HOH A 9 409 122 HOH HOH . 
L 7 HOH A 10 410 78 HOH HOH . 
L 7 HOH A 11 411 28 HOH HOH . 
L 7 HOH A 12 412 138 HOH HOH . 
L 7 HOH A 13 413 1 HOH HOH . 
L 7 HOH A 14 414 60 HOH HOH . 
L 7 HOH A 15 415 55 HOH HOH . 
L 7 HOH A 16 416 51 HOH HOH . 
L 7 HOH A 17 417 52 HOH HOH . 
L 7 HOH A 18 418 83 HOH HOH . 
L 7 HOH A 19 419 94 HOH HOH . 
L 7 HOH A 20 420 44 HOH HOH . 
L 7 HOH A 21 421 31 HOH HOH . 
L 7 HOH A 22 422 84 HOH HOH . 
L 7 HOH A 23 423 22 HOH HOH . 
L 7 HOH A 24 424 53 HOH HOH . 
L 7 HOH A 25 425 108 HOH HOH . 
L 7 HOH A 26 426 152 HOH HOH . 
L 7 HOH A 27 427 81 HOH HOH . 
L 7 HOH A 28 428 115 HOH HOH . 
L 7 HOH A 29 429 4 HOH HOH . 
L 7 HOH A 30 430 7 HOH HOH . 
L 7 HOH A 31 431 180 HOH HOH . 
L 7 HOH A 32 432 8 HOH HOH . 
L 7 HOH A 33 433 82 HOH HOH . 
L 7 HOH A 34 434 26 HOH HOH . 
L 7 HOH A 35 435 18 HOH HOH . 
L 7 HOH A 36 436 48 HOH HOH . 
L 7 HOH A 37 437 49 HOH HOH . 
L 7 HOH A 38 438 37 HOH HOH . 
L 7 HOH A 39 439 72 HOH HOH . 
L 7 HOH A 40 440 131 HOH HOH . 
L 7 HOH A 41 441 135 HOH HOH . 
L 7 HOH A 42 442 5 HOH HOH . 
L 7 HOH A 43 443 65 HOH HOH . 
L 7 HOH A 44 444 177 HOH HOH . 
L 7 HOH A 45 445 123 HOH HOH . 
L 7 HOH A 46 446 130 HOH HOH . 
L 7 HOH A 47 447 164 HOH HOH . 
L 7 HOH A 48 448 69 HOH HOH . 
L 7 HOH A 49 449 27 HOH HOH . 
L 7 HOH A 50 450 58 HOH HOH . 
L 7 HOH A 51 451 179 HOH HOH . 
L 7 HOH A 52 452 139 HOH HOH . 
L 7 HOH A 53 453 107 HOH HOH . 
L 7 HOH A 54 454 92 HOH HOH . 
L 7 HOH A 55 455 88 HOH HOH . 
L 7 HOH A 56 456 149 HOH HOH . 
L 7 HOH A 57 457 98 HOH HOH . 
L 7 HOH A 58 458 15 HOH HOH . 
L 7 HOH A 59 459 136 HOH HOH . 
L 7 HOH A 60 460 42 HOH HOH . 
L 7 HOH A 61 461 134 HOH HOH . 
L 7 HOH A 62 462 10 HOH HOH . 
L 7 HOH A 63 463 9 HOH HOH . 
L 7 HOH A 64 464 124 HOH HOH . 
L 7 HOH A 65 465 174 HOH HOH . 
L 7 HOH A 66 466 89 HOH HOH . 
L 7 HOH A 67 467 173 HOH HOH . 
L 7 HOH A 68 468 119 HOH HOH . 
L 7 HOH A 69 469 35 HOH HOH . 
L 7 HOH A 70 470 36 HOH HOH . 
L 7 HOH A 71 471 133 HOH HOH . 
L 7 HOH A 72 472 3 HOH HOH . 
L 7 HOH A 73 473 128 HOH HOH . 
L 7 HOH A 74 474 91 HOH HOH . 
L 7 HOH A 75 475 127 HOH HOH . 
L 7 HOH A 76 476 34 HOH HOH . 
L 7 HOH A 77 477 70 HOH HOH . 
L 7 HOH A 78 478 140 HOH HOH . 
L 7 HOH A 79 479 126 HOH HOH . 
L 7 HOH A 80 480 176 HOH HOH . 
L 7 HOH A 81 481 137 HOH HOH . 
L 7 HOH A 82 482 116 HOH HOH . 
L 7 HOH A 83 483 112 HOH HOH . 
L 7 HOH A 84 484 93 HOH HOH . 
L 7 HOH A 85 485 57 HOH HOH . 
L 7 HOH A 86 486 90 HOH HOH . 
L 7 HOH A 87 487 156 HOH HOH . 
L 7 HOH A 88 488 161 HOH HOH . 
L 7 HOH A 89 489 66 HOH HOH . 
L 7 HOH A 90 490 121 HOH HOH . 
L 7 HOH A 91 491 97 HOH HOH . 
L 7 HOH A 92 492 109 HOH HOH . 
L 7 HOH A 93 493 106 HOH HOH . 
L 7 HOH A 94 494 178 HOH HOH . 
L 7 HOH A 95 495 96 HOH HOH . 
L 7 HOH A 96 496 157 HOH HOH . 
L 7 HOH A 97 497 99 HOH HOH . 
L 7 HOH A 98 498 111 HOH HOH . 
L 7 HOH A 99 499 80 HOH HOH . 
M 7 HOH B 1 401 102 HOH HOH . 
M 7 HOH B 2 402 39 HOH HOH . 
M 7 HOH B 3 403 41 HOH HOH . 
M 7 HOH B 4 404 100 HOH HOH . 
M 7 HOH B 5 405 74 HOH HOH . 
M 7 HOH B 6 406 56 HOH HOH . 
M 7 HOH B 7 407 87 HOH HOH . 
M 7 HOH B 8 408 103 HOH HOH . 
M 7 HOH B 9 409 162 HOH HOH . 
M 7 HOH B 10 410 170 HOH HOH . 
M 7 HOH B 11 411 132 HOH HOH . 
M 7 HOH B 12 412 32 HOH HOH . 
M 7 HOH B 13 413 40 HOH HOH . 
M 7 HOH B 14 414 168 HOH HOH . 
M 7 HOH B 15 415 47 HOH HOH . 
M 7 HOH B 16 416 20 HOH HOH . 
M 7 HOH B 17 417 13 HOH HOH . 
M 7 HOH B 18 418 46 HOH HOH . 
M 7 HOH B 19 419 159 HOH HOH . 
M 7 HOH B 20 420 12 HOH HOH . 
M 7 HOH B 21 421 43 HOH HOH . 
M 7 HOH B 22 422 95 HOH HOH . 
M 7 HOH B 23 423 169 HOH HOH . 
M 7 HOH B 24 424 160 HOH HOH . 
M 7 HOH B 25 425 77 HOH HOH . 
M 7 HOH B 26 426 21 HOH HOH . 
M 7 HOH B 27 427 165 HOH HOH . 
M 7 HOH B 28 428 101 HOH HOH . 
M 7 HOH B 29 429 113 HOH HOH . 
M 7 HOH B 30 430 11 HOH HOH . 
M 7 HOH B 31 431 30 HOH HOH . 
M 7 HOH B 32 432 59 HOH HOH . 
M 7 HOH B 33 433 171 HOH HOH . 
M 7 HOH B 34 434 153 HOH HOH . 
M 7 HOH B 35 435 146 HOH HOH . 
M 7 HOH B 36 436 33 HOH HOH . 
M 7 HOH B 37 437 68 HOH HOH . 
M 7 HOH B 38 438 17 HOH HOH . 
M 7 HOH B 39 439 14 HOH HOH . 
M 7 HOH B 40 440 79 HOH HOH . 
M 7 HOH B 41 441 19 HOH HOH . 
M 7 HOH B 42 442 2 HOH HOH . 
M 7 HOH B 43 443 73 HOH HOH . 
M 7 HOH B 44 444 76 HOH HOH . 
M 7 HOH B 45 445 24 HOH HOH . 
M 7 HOH B 46 446 63 HOH HOH . 
M 7 HOH B 47 447 25 HOH HOH . 
M 7 HOH B 48 448 64 HOH HOH . 
M 7 HOH B 49 449 117 HOH HOH . 
M 7 HOH B 50 450 67 HOH HOH . 
M 7 HOH B 51 451 16 HOH HOH . 
M 7 HOH B 52 452 148 HOH HOH . 
M 7 HOH B 53 453 6 HOH HOH . 
M 7 HOH B 54 454 85 HOH HOH . 
M 7 HOH B 55 455 105 HOH HOH . 
M 7 HOH B 56 456 155 HOH HOH . 
M 7 HOH B 57 457 50 HOH HOH . 
M 7 HOH B 58 458 167 HOH HOH . 
M 7 HOH B 59 459 54 HOH HOH . 
M 7 HOH B 60 460 145 HOH HOH . 
M 7 HOH B 61 461 118 HOH HOH . 
M 7 HOH B 62 462 86 HOH HOH . 
M 7 HOH B 63 463 158 HOH HOH . 
M 7 HOH B 64 464 151 HOH HOH . 
M 7 HOH B 65 465 143 HOH HOH . 
M 7 HOH B 66 466 75 HOH HOH . 
M 7 HOH B 67 467 141 HOH HOH . 
M 7 HOH B 68 468 62 HOH HOH . 
M 7 HOH B 69 469 147 HOH HOH . 
M 7 HOH B 70 470 23 HOH HOH . 
M 7 HOH B 71 471 104 HOH HOH . 
M 7 HOH B 72 472 142 HOH HOH . 
M 7 HOH B 73 473 166 HOH HOH . 
M 7 HOH B 74 474 154 HOH HOH . 
M 7 HOH B 75 475 144 HOH HOH . 
M 7 HOH B 76 476 110 HOH HOH . 
M 7 HOH B 77 477 175 HOH HOH . 
M 7 HOH B 78 478 61 HOH HOH . 
M 7 HOH B 79 479 150 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MLT . . . H 3 39.402 -13.74 -2.111 1 32.65 ? C1 MLT 302 B 1 
HETATM 2 O O1 MLT . . . H 3 39.086 -12.529 -2.168 1 32.84 ? O1 MLT 302 B 1 
HETATM 3 O O2 MLT . . . H 3 39.682 -14.27 -1.014 1 32.88 ? O2 MLT 302 B 1 
HETATM 4 C C2 MLT . . . H 3 39.384 -14.57 -3.355 1 31.08 ? C2 MLT 302 B 1 
HETATM 5 O O3 MLT . . . H 3 38.854 -13.826 -4.425 1 29.68 ? O3 MLT 302 B 1 
HETATM 6 C C3 MLT . . . H 3 38.56 -15.825 -3.102 1 34.19 ? C3 MLT 302 B 1 
HETATM 7 C C4 MLT . . . H 3 38.445 -16.573 -4.409 1 34.33 ? C4 MLT 302 B 1 
HETATM 8 O O4 MLT . . . H 3 37.403 -16.534 -5.105 1 34.35 ? O4 MLT 302 B 1 
HETATM 9 O O5 MLT . . . H 3 39.414 -17.253 -4.805 1 33.16 ? O5 MLT 302 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           9 
#