data_8TXY # _model_server_result.job_id DJtCrVyN-SxuUwSOz0ATgQ _model_server_result.datetime_utc '2024-11-20 02:39:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8txy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":402}' # _entry.id 8TXY # _exptl.entry_id 8TXY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 416.476 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(5P,8R)-5-(2-cyano-5-{[(3R)-1-methylpyrrolidin-3-yl]methoxy}pyridin-4-yl)pyrazolo[1,5-a]pyridin-2-yl]cyclopropanecarboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8TXY _cell.length_a 121.43 _cell.length_b 121.43 _cell.length_c 99.64 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TXY _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,I 1 1 B,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 164 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 210 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 164 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 210 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.042 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C23 H24 N6 O2' _chem_comp.formula_weight 416.476 _chem_comp.id SJ0 _chem_comp.mon_nstd_flag . _chem_comp.name N-[(5P,8R)-5-(2-cyano-5-{[(3R)-1-methylpyrrolidin-3-yl]methoxy}pyridin-4-yl)pyrazolo[1,5-a]pyridin-2-yl]cyclopropanecarboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C SJ0 doub 306 n n C N SJ0 sing 307 n n N C1 SJ0 sing 308 n n C1 N1 SJ0 doub 309 n y N1 N2 SJ0 sing 310 n y N2 C2 SJ0 sing 311 n y C3 C2 SJ0 doub 312 n y C1 C3 SJ0 sing 313 n y C2 C4 SJ0 sing 314 n y C4 C5 SJ0 doub 315 n y C5 C6 SJ0 sing 316 n n C6 C7 SJ0 doub 317 n y O1 C7 SJ0 sing 318 n n C8 O1 SJ0 sing 319 n n C9 C8 SJ0 sing 320 n n C9 C10 SJ0 sing 321 n n C10 N3 SJ0 sing 322 n n C11 N3 SJ0 sing 323 n n N3 C12 SJ0 sing 324 n n C12 C13 SJ0 sing 325 n n C13 C9 SJ0 sing 326 n n C7 C14 SJ0 sing 327 n y C14 N4 SJ0 doub 328 n y N4 C15 SJ0 sing 329 n y C15 C16 SJ0 sing 330 n n C16 N5 SJ0 trip 331 n n C17 C15 SJ0 doub 332 n y C6 C17 SJ0 sing 333 n y C18 C5 SJ0 sing 334 n y C19 C18 SJ0 doub 335 n y N2 C19 SJ0 sing 336 n y C20 C SJ0 sing 337 n n C20 C21 SJ0 sing 338 n n C21 C22 SJ0 sing 339 n n C22 C20 SJ0 sing 340 n n C4 H3 SJ0 sing 341 n n C14 H15 SJ0 sing 342 n n C8 H4 SJ0 sing 343 n n C8 H5 SJ0 sing 344 n n C9 H SJ0 sing 345 n n C13 H13 SJ0 sing 346 n n C13 H14 SJ0 sing 347 n n C12 H11 SJ0 sing 348 n n C12 H12 SJ0 sing 349 n n C11 H8 SJ0 sing 350 n n C11 H10 SJ0 sing 351 n n C11 H9 SJ0 sing 352 n n C10 H6 SJ0 sing 353 n n C10 H7 SJ0 sing 354 n n C17 H16 SJ0 sing 355 n n C18 H17 SJ0 sing 356 n n C19 H18 SJ0 sing 357 n n C3 H2 SJ0 sing 358 n n N H1 SJ0 sing 359 n n C20 H19 SJ0 sing 360 n n C22 H22 SJ0 sing 361 n n C22 H23 SJ0 sing 362 n n C21 H20 SJ0 sing 363 n n C21 H21 SJ0 sing 364 n n # _atom_sites.entry_id 8TXY _atom_sites.fract_transf_matrix[1][1] 0.008235 _atom_sites.fract_transf_matrix[1][2] 0.004755 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009509 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010036 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG A 1 401 401 PEG PEG . D 2 PEG A 1 402 501 PEG PEG . E 3 SJ0 A 1 403 1 SJ0 BRD . F 4 SO4 A 1 404 1 SO4 SO4 . G 2 PEG B 1 401 401 PEG PEG . H 3 SJ0 B 1 402 1 SJ0 BRD . I 5 HOH A 1 501 73 HOH HOH . I 5 HOH A 2 502 14 HOH HOH . I 5 HOH A 3 503 29 HOH HOH . I 5 HOH A 4 504 11 HOH HOH . I 5 HOH A 5 505 98 HOH HOH . I 5 HOH A 6 506 20 HOH HOH . I 5 HOH A 7 507 89 HOH HOH . I 5 HOH A 8 508 83 HOH HOH . I 5 HOH A 9 509 70 HOH HOH . I 5 HOH A 10 510 3 HOH HOH . I 5 HOH A 11 511 39 HOH HOH . I 5 HOH A 12 512 88 HOH HOH . I 5 HOH A 13 513 32 HOH HOH . I 5 HOH A 14 514 4 HOH HOH . I 5 HOH A 15 515 100 HOH HOH . I 5 HOH A 16 516 80 HOH HOH . I 5 HOH A 17 517 99 HOH HOH . I 5 HOH A 18 518 50 HOH HOH . I 5 HOH A 19 519 61 HOH HOH . I 5 HOH A 20 520 23 HOH HOH . I 5 HOH A 21 521 8 HOH HOH . I 5 HOH A 22 522 38 HOH HOH . I 5 HOH A 23 523 21 HOH HOH . I 5 HOH A 24 524 22 HOH HOH . I 5 HOH A 25 525 82 HOH HOH . I 5 HOH A 26 526 45 HOH HOH . I 5 HOH A 27 527 93 HOH HOH . I 5 HOH A 28 528 49 HOH HOH . I 5 HOH A 29 529 35 HOH HOH . I 5 HOH A 30 530 47 HOH HOH . I 5 HOH A 31 531 2 HOH HOH . I 5 HOH A 32 532 77 HOH HOH . I 5 HOH A 33 533 26 HOH HOH . I 5 HOH A 34 534 19 HOH HOH . I 5 HOH A 35 535 95 HOH HOH . I 5 HOH A 36 536 69 HOH HOH . I 5 HOH A 37 537 97 HOH HOH . I 5 HOH A 38 538 34 HOH HOH . I 5 HOH A 39 539 15 HOH HOH . I 5 HOH A 40 540 41 HOH HOH . I 5 HOH A 41 541 74 HOH HOH . I 5 HOH A 42 542 51 HOH HOH . I 5 HOH A 43 543 86 HOH HOH . I 5 HOH A 44 544 48 HOH HOH . I 5 HOH A 45 545 68 HOH HOH . I 5 HOH A 46 546 18 HOH HOH . I 5 HOH A 47 547 78 HOH HOH . I 5 HOH A 48 548 92 HOH HOH . I 5 HOH A 49 549 66 HOH HOH . I 5 HOH A 50 550 42 HOH HOH . I 5 HOH A 51 551 7 HOH HOH . I 5 HOH A 52 552 54 HOH HOH . I 5 HOH A 53 553 67 HOH HOH . I 5 HOH A 54 554 59 HOH HOH . I 5 HOH A 55 555 85 HOH HOH . J 5 HOH B 1 501 16 HOH HOH . J 5 HOH B 2 502 79 HOH HOH . J 5 HOH B 3 503 96 HOH HOH . J 5 HOH B 4 504 60 HOH HOH . J 5 HOH B 5 505 40 HOH HOH . J 5 HOH B 6 506 25 HOH HOH . J 5 HOH B 7 507 62 HOH HOH . J 5 HOH B 8 508 36 HOH HOH . J 5 HOH B 9 509 71 HOH HOH . J 5 HOH B 10 510 52 HOH HOH . J 5 HOH B 11 511 10 HOH HOH . J 5 HOH B 12 512 56 HOH HOH . J 5 HOH B 13 513 5 HOH HOH . J 5 HOH B 14 514 90 HOH HOH . J 5 HOH B 15 515 12 HOH HOH . J 5 HOH B 16 516 57 HOH HOH . J 5 HOH B 17 517 6 HOH HOH . J 5 HOH B 18 518 58 HOH HOH . J 5 HOH B 19 519 1 HOH HOH . J 5 HOH B 20 520 33 HOH HOH . J 5 HOH B 21 521 43 HOH HOH . J 5 HOH B 22 522 87 HOH HOH . J 5 HOH B 23 523 13 HOH HOH . J 5 HOH B 24 524 63 HOH HOH . J 5 HOH B 25 525 17 HOH HOH . J 5 HOH B 26 526 9 HOH HOH . J 5 HOH B 27 527 28 HOH HOH . J 5 HOH B 28 528 94 HOH HOH . J 5 HOH B 29 529 72 HOH HOH . J 5 HOH B 30 530 31 HOH HOH . J 5 HOH B 31 531 24 HOH HOH . J 5 HOH B 32 532 44 HOH HOH . J 5 HOH B 33 533 55 HOH HOH . J 5 HOH B 34 534 53 HOH HOH . J 5 HOH B 35 535 81 HOH HOH . J 5 HOH B 36 536 75 HOH HOH . J 5 HOH B 37 537 84 HOH HOH . J 5 HOH B 38 538 37 HOH HOH . J 5 HOH B 39 539 91 HOH HOH . J 5 HOH B 40 540 30 HOH HOH . J 5 HOH B 41 541 76 HOH HOH . J 5 HOH B 42 542 64 HOH HOH . J 5 HOH B 43 543 46 HOH HOH . J 5 HOH B 44 544 65 HOH HOH . J 5 HOH B 45 545 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 SJ0 . . . H 3 -42.189 33.528 -34.053 0.7 68.38 ? C4 SJ0 402 B 1 HETATM 2 N N3 SJ0 . . . H 3 -40.364 30.221 -28.759 0.7 70.62 ? N3 SJ0 402 B 1 HETATM 3 C C2 SJ0 . . . H 3 -43.595 33.347 -34.124 0.7 68.45 ? C2 SJ0 402 B 1 HETATM 4 N N1 SJ0 . . . H 3 -45.488 32.684 -35.248 0.7 68.23 ? N1 SJ0 402 B 1 HETATM 5 C C7 SJ0 . . . H 3 -39.203 32.749 -33.946 0.7 69.54 ? C7 SJ0 402 B 1 HETATM 6 C C6 SJ0 . . . H 3 -39.929 33.235 -35.062 0.7 69.02 ? C6 SJ0 402 B 1 HETATM 7 C C5 SJ0 . . . H 3 -41.412 33.163 -35.143 0.7 68.43 ? C5 SJ0 402 B 1 HETATM 8 N N5 SJ0 . . . H 3 -36.414 35.01 -37.868 0.7 69.12 ? N5 SJ0 402 B 1 HETATM 9 C C16 SJ0 . . . H 3 -37.041 34.508 -37.049 0.7 69.26 ? C16 SJ0 402 B 1 HETATM 10 C C15 SJ0 . . . H 3 -37.81 33.885 -36.03 0.7 69.18 ? C15 SJ0 402 B 1 HETATM 11 N N4 SJ0 . . . H 3 -37.098 33.426 -34.983 0.7 69.46 ? N4 SJ0 402 B 1 HETATM 12 C C14 SJ0 . . . H 3 -37.777 32.871 -33.965 0.7 69.54 ? C14 SJ0 402 B 1 HETATM 13 O O1 SJ0 . . . H 3 -39.928 32.22 -32.884 0.7 69.81 ? O1 SJ0 402 B 1 HETATM 14 C C8 SJ0 . . . H 3 -39.288 31.435 -31.879 0.7 70.18 ? C8 SJ0 402 B 1 HETATM 15 C C9 SJ0 . . . H 3 -40.415 30.678 -31.159 0.7 70.54 ? C9 SJ0 402 B 1 HETATM 16 C C13 SJ0 . . . H 3 -41.393 31.609 -30.409 0.7 70.54 ? C13 SJ0 402 B 1 HETATM 17 C C12 SJ0 . . . H 3 -40.864 31.615 -28.973 0.7 70.52 ? C12 SJ0 402 B 1 HETATM 18 C C11 SJ0 . . . H 3 -39.371 30.115 -27.649 0.7 70.69 ? C11 SJ0 402 B 1 HETATM 19 C C10 SJ0 . . . H 3 -39.853 29.721 -30.075 0.7 70.56 ? C10 SJ0 402 B 1 HETATM 20 C C17 SJ0 . . . H 3 -39.192 33.819 -36.131 0.7 68.97 ? C17 SJ0 402 B 1 HETATM 21 C C18 SJ0 . . . H 3 -42.023 32.654 -36.33 0.7 67.78 ? C18 SJ0 402 B 1 HETATM 22 C C19 SJ0 . . . H 3 -43.372 32.509 -36.41 0.7 67.73 ? C19 SJ0 402 B 1 HETATM 23 N N2 SJ0 . . . H 3 -44.153 32.838 -35.315 0.7 67.91 ? N2 SJ0 402 B 1 HETATM 24 C C3 SJ0 . . . H 3 -44.666 33.525 -33.232 0.7 68.81 ? C3 SJ0 402 B 1 HETATM 25 C C1 SJ0 . . . H 3 -45.815 33.1 -33.95 0.7 69.14 ? C1 SJ0 402 B 1 HETATM 26 N N SJ0 . . . H 3 -47.175 33.03 -33.581 0.7 70.2 ? N SJ0 402 B 1 HETATM 27 C C SJ0 . . . H 3 -47.793 33.457 -32.378 0.7 71.41 ? C SJ0 402 B 1 HETATM 28 O O SJ0 . . . H 3 -47.214 34.031 -31.46 0.7 71.99 ? O SJ0 402 B 1 HETATM 29 C C20 SJ0 . . . H 3 -49.28 33.18 -32.327 0.7 71.81 ? C20 SJ0 402 B 1 HETATM 30 C C22 SJ0 . . . H 3 -50.193 34.198 -31.671 0.7 71.85 ? C22 SJ0 402 B 1 HETATM 31 C C21 SJ0 . . . H 3 -49.89 32.889 -30.97 0.7 71.86 ? C21 SJ0 402 B 1 HETATM 32 H H3 SJ0 . . . H 3 -41.775 33.951 -33.139 0 68.38 ? H3 SJ0 402 B 1 HETATM 33 H H15 SJ0 . . . H 3 -37.136 32.55 -33.145 0 69.54 ? H15 SJ0 402 B 1 HETATM 34 H H4 SJ0 . . . H 3 -38.723 32.054 -31.183 0 70.18 ? H4 SJ0 402 B 1 HETATM 35 H H5 SJ0 . . . H 3 -38.585 30.719 -32.304 0 70.18 ? H5 SJ0 402 B 1 HETATM 36 H H SJ0 . . . H 3 -40.949 30.11 -31.918 0 70.54 ? H SJ0 402 B 1 HETATM 37 H H13 SJ0 . . . H 3 -41.43 32.614 -30.827 0 70.54 ? H13 SJ0 402 B 1 HETATM 38 H H14 SJ0 . . . H 3 -42.422 31.257 -30.45 0 70.54 ? H14 SJ0 402 B 1 HETATM 39 H H11 SJ0 . . . H 3 -40.126 32.402 -28.826 0 70.52 ? H11 SJ0 402 B 1 HETATM 40 H H12 SJ0 . . . H 3 -41.645 31.808 -28.239 0 70.52 ? H12 SJ0 402 B 1 HETATM 41 H H8 SJ0 . . . H 3 -38.619 30.895 -27.765 0 70.69 ? H8 SJ0 402 B 1 HETATM 42 H H10 SJ0 . . . H 3 -38.856 29.157 -27.714 0 70.69 ? H10 SJ0 402 B 1 HETATM 43 H H9 SJ0 . . . H 3 -39.766 30.202 -26.637 0 70.69 ? H9 SJ0 402 B 1 HETATM 44 H H6 SJ0 . . . H 3 -38.769 29.634 -30.138 0 70.56 ? H6 SJ0 402 B 1 HETATM 45 H H7 SJ0 . . . H 3 -40.219 28.701 -30.177 0 70.56 ? H7 SJ0 402 B 1 HETATM 46 H H16 SJ0 . . . H 3 -39.696 34.229 -37.005 0 68.97 ? H16 SJ0 402 B 1 HETATM 47 H H17 SJ0 . . . H 3 -41.417 32.361 -37.185 0 67.78 ? H17 SJ0 402 B 1 HETATM 48 H H18 SJ0 . . . H 3 -43.884 32.149 -37.301 0 67.73 ? H18 SJ0 402 B 1 HETATM 49 H H2 SJ0 . . . H 3 -44.601 33.9 -32.212 0 68.81 ? H2 SJ0 402 B 1 HETATM 50 H H1 SJ0 . . . H 3 -47.752 32.603 -34.298 0 70.2 ? H1 SJ0 402 B 1 HETATM 51 H H19 SJ0 . . . H 3 -49.638 32.619 -33.189 0 71.81 ? H19 SJ0 402 B 1 HETATM 52 H H22 SJ0 . . . H 3 -49.775 35.134 -31.306 0 71.85 ? H22 SJ0 402 B 1 HETATM 53 H H23 SJ0 . . . H 3 -51.19 34.382 -32.069 0 71.85 ? H23 SJ0 402 B 1 HETATM 54 H H20 SJ0 . . . H 3 -49.247 32.869 -30.091 0 71.86 ? H20 SJ0 402 B 1 HETATM 55 H H21 SJ0 . . . H 3 -50.661 32.126 -30.876 0 71.86 ? H21 SJ0 402 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 55 #