data_8TZ8 # _model_server_result.job_id Zfk8hKqSy4b7o383RMGs-w _model_server_result.datetime_utc '2024-10-19 07:33:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tz8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":801}' # _entry.id 8TZ8 # _exptl.entry_id 8TZ8 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 329.306 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-hydroxy-5'-O-(2-methylpropanoyl)cytidine" _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8TZ8 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TZ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 G N N # _chem_comp.formula 'C13 H19 N3 O7' _chem_comp.formula_weight 329.306 _chem_comp.id XMO _chem_comp.mon_nstd_flag . _chem_comp.name "N-hydroxy-5'-O-(2-methylpropanoyl)cytidine" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Molnupiravir # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O19 C18 XMO doub 507 n n N17 C18 XMO sing 508 n n N17 C16 XMO doub 509 n n C18 N13 XMO sing 510 n n N20 C16 XMO sing 511 n n N20 O21 XMO sing 512 n n O22 C10 XMO sing 513 n n C16 C15 XMO sing 514 n n N13 C11 XMO sing 515 n n N13 C14 XMO sing 516 n n C11 C10 XMO sing 517 n n C11 O12 XMO sing 518 n n C10 C09 XMO sing 519 n n C15 C14 XMO doub 520 n n O12 C08 XMO sing 521 n n C09 O23 XMO sing 522 n n C09 C08 XMO sing 523 n n C08 C07 XMO sing 524 n n C07 O06 XMO sing 525 n n O06 C04 XMO sing 526 n n C04 C02 XMO sing 527 n n C04 O05 XMO doub 528 n n C02 C03 XMO sing 529 n n C02 C01 XMO sing 530 n n C10 H101 XMO sing 531 n n C11 H111 XMO sing 532 n n C01 H012 XMO sing 533 n n C01 H013 XMO sing 534 n n C01 H011 XMO sing 535 n n C02 H021 XMO sing 536 n n C03 H033 XMO sing 537 n n C03 H031 XMO sing 538 n n C03 H032 XMO sing 539 n n C07 H072 XMO sing 540 n n C07 H071 XMO sing 541 n n C08 H081 XMO sing 542 n n C09 H091 XMO sing 543 n n C14 H141 XMO sing 544 n n C15 H151 XMO sing 545 n n N20 H201 XMO sing 546 n n O21 H211 XMO sing 547 n n O22 H221 XMO sing 548 n n O23 H231 XMO sing 549 n n # _atom_sites.entry_id 8TZ8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 XMO A 1 801 701 XMO MPV . E 3 LBN A 1 802 704 LBN LBN . F 2 XMO B 1 801 701 XMO MPV . G 2 XMO C 1 801 701 XMO MPV . H 3 LBN C 1 802 702 LBN LBN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 XMO . . . D 2 156.041 142.176 139.715 1 50.72 ? C10 XMO 801 A 1 HETATM 2 C C11 XMO . . . D 2 154.883 141.614 139.845 1 50.72 ? C11 XMO 801 A 1 HETATM 3 C C01 XMO . . . D 2 154.428 138.615 134.667 1 50.72 ? C01 XMO 801 A 1 HETATM 4 C C02 XMO . . . D 2 154.358 139.722 133.621 1 50.72 ? C02 XMO 801 A 1 HETATM 5 C C03 XMO . . . D 2 153.207 139.495 132.693 1 50.72 ? C03 XMO 801 A 1 HETATM 6 C C04 XMO . . . D 2 154.279 141.111 134.294 1 50.72 ? C04 XMO 801 A 1 HETATM 7 C C07 XMO . . . D 2 154.547 142.594 136.216 1 50.72 ? C07 XMO 801 A 1 HETATM 8 C C08 XMO . . . D 2 154.677 142.61 137.736 1 50.72 ? C08 XMO 801 A 1 HETATM 9 C C09 XMO . . . D 2 156.164 142.564 138.175 1 50.72 ? C09 XMO 801 A 1 HETATM 10 C C14 XMO . . . D 2 155.005 139.106 139.616 1 50.72 ? C14 XMO 801 A 1 HETATM 11 C C15 XMO . . . D 2 155.179 137.762 140.234 1 50.72 ? C15 XMO 801 A 1 HETATM 12 C C16 XMO . . . D 2 155.399 137.641 141.711 1 50.72 ? C16 XMO 801 A 1 HETATM 13 C C18 XMO . . . D 2 155.266 140.188 141.905 1 50.72 ? C18 XMO 801 A 1 HETATM 14 N N13 XMO . . . D 2 155.047 140.308 140.439 1 50.72 ? N13 XMO 801 A 1 HETATM 15 N N17 XMO . . . D 2 155.441 138.836 142.527 1 50.72 ? N17 XMO 801 A 1 HETATM 16 N N20 XMO . . . D 2 155.569 136.344 142.317 1 50.72 ? N20 XMO 801 A 1 HETATM 17 O O05 XMO . . . D 2 154.13 142.06 133.65 1 50.72 ? O05 XMO 801 A 1 HETATM 18 O O06 XMO . . . D 2 154.395 141.227 135.762 1 50.72 ? O06 XMO 801 A 1 HETATM 19 O O12 XMO . . . D 2 154.222 141.52 138.302 1 50.72 ? O12 XMO 801 A 1 HETATM 20 O O19 XMO . . . D 2 155.303 141.146 142.571 1 50.72 ? O19 XMO 801 A 1 HETATM 21 O O21 XMO . . . D 2 155.526 135.156 141.508 1 50.72 ? O21 XMO 801 A 1 HETATM 22 O O22 XMO . . . D 2 156.096 143.396 140.515 1 50.72 ? O22 XMO 801 A 1 HETATM 23 O O23 XMO . . . D 2 156.731 143.746 138.045 1 50.72 ? O23 XMO 801 A 1 HETATM 24 H H101 XMO . . . D 2 156.855 141.467 140.007 1 50.72 ? H101 XMO 801 A 1 HETATM 25 H H111 XMO . . . D 2 154.215 142.267 140.512 1 50.72 ? H111 XMO 801 A 1 HETATM 26 H H012 XMO . . . D 2 153.448 138.404 135.019 1 50.72 ? H012 XMO 801 A 1 HETATM 27 H H013 XMO . . . D 2 155.073 138.95 135.536 1 50.72 ? H013 XMO 801 A 1 HETATM 28 H H011 XMO . . . D 2 154.839 137.742 134.231 1 50.72 ? H011 XMO 801 A 1 HETATM 29 H H021 XMO . . . D 2 155.289 139.688 133.023 1 50.72 ? H021 XMO 801 A 1 HETATM 30 H H033 XMO . . . D 2 153.325 140.115 131.806 1 50.72 ? H033 XMO 801 A 1 HETATM 31 H H031 XMO . . . D 2 153.182 138.442 132.4 1 50.72 ? H031 XMO 801 A 1 HETATM 32 H H032 XMO . . . D 2 152.245 139.762 133.209 1 50.72 ? H032 XMO 801 A 1 HETATM 33 H H072 XMO . . . D 2 155.427 143.009 135.792 1 50.72 ? H072 XMO 801 A 1 HETATM 34 H H071 XMO . . . D 2 153.679 143.189 135.913 1 50.72 ? H071 XMO 801 A 1 HETATM 35 H H081 XMO . . . D 2 154.191 143.478 138.148 1 50.72 ? H081 XMO 801 A 1 HETATM 36 H H091 XMO . . . D 2 156.724 141.773 137.61 1 50.72 ? H091 XMO 801 A 1 HETATM 37 H H141 XMO . . . D 2 154.847 139.18 138.551 1 50.72 ? H141 XMO 801 A 1 HETATM 38 H H151 XMO . . . D 2 155.144 136.859 139.597 1 50.72 ? H151 XMO 801 A 1 HETATM 39 H H201 XMO . . . D 2 155.716 136.269 143.315 1 50.72 ? H201 XMO 801 A 1 HETATM 40 H H211 XMO . . . D 2 156.277 135.099 141.001 1 50.72 ? H211 XMO 801 A 1 HETATM 41 H H221 XMO . . . D 2 156.203 143.179 141.4 1 50.72 ? H221 XMO 801 A 1 HETATM 42 H H231 XMO . . . D 2 156.635 144.241 138.882 1 50.72 ? H231 XMO 801 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 42 #