data_8TZ8 # _model_server_result.job_id GpBT17DbKulqMI4baWlUow _model_server_result.datetime_utc '2024-10-19 07:45:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tz8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":801}' # _entry.id 8TZ8 # _exptl.entry_id 8TZ8 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 329.306 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-hydroxy-5'-O-(2-methylpropanoyl)cytidine" _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8TZ8 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TZ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 G N N # _chem_comp.formula 'C13 H19 N3 O7' _chem_comp.formula_weight 329.306 _chem_comp.id XMO _chem_comp.mon_nstd_flag . _chem_comp.name "N-hydroxy-5'-O-(2-methylpropanoyl)cytidine" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Molnupiravir # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O19 C18 XMO doub 507 n n N17 C18 XMO sing 508 n n N17 C16 XMO doub 509 n n C18 N13 XMO sing 510 n n N20 C16 XMO sing 511 n n N20 O21 XMO sing 512 n n O22 C10 XMO sing 513 n n C16 C15 XMO sing 514 n n N13 C11 XMO sing 515 n n N13 C14 XMO sing 516 n n C11 C10 XMO sing 517 n n C11 O12 XMO sing 518 n n C10 C09 XMO sing 519 n n C15 C14 XMO doub 520 n n O12 C08 XMO sing 521 n n C09 O23 XMO sing 522 n n C09 C08 XMO sing 523 n n C08 C07 XMO sing 524 n n C07 O06 XMO sing 525 n n O06 C04 XMO sing 526 n n C04 C02 XMO sing 527 n n C04 O05 XMO doub 528 n n C02 C03 XMO sing 529 n n C02 C01 XMO sing 530 n n C10 H101 XMO sing 531 n n C11 H111 XMO sing 532 n n C01 H012 XMO sing 533 n n C01 H013 XMO sing 534 n n C01 H011 XMO sing 535 n n C02 H021 XMO sing 536 n n C03 H033 XMO sing 537 n n C03 H031 XMO sing 538 n n C03 H032 XMO sing 539 n n C07 H072 XMO sing 540 n n C07 H071 XMO sing 541 n n C08 H081 XMO sing 542 n n C09 H091 XMO sing 543 n n C14 H141 XMO sing 544 n n C15 H151 XMO sing 545 n n N20 H201 XMO sing 546 n n O21 H211 XMO sing 547 n n O22 H221 XMO sing 548 n n O23 H231 XMO sing 549 n n # _atom_sites.entry_id 8TZ8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 XMO A 1 801 701 XMO MPV . E 3 LBN A 1 802 704 LBN LBN . F 2 XMO B 1 801 701 XMO MPV . G 2 XMO C 1 801 701 XMO MPV . H 3 LBN C 1 802 702 LBN LBN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 XMO . . . F 2 126.688 151.898 139.492 1 44.27 ? C10 XMO 801 B 1 HETATM 2 C C11 XMO . . . F 2 127.737 151.212 139.189 1 44.27 ? C11 XMO 801 B 1 HETATM 3 C C01 XMO . . . F 2 129.379 149.744 132.878 1 44.27 ? C01 XMO 801 B 1 HETATM 4 C C02 XMO . . . F 2 129.15 150.881 133.868 1 44.27 ? C02 XMO 801 B 1 HETATM 5 C C03 XMO . . . F 2 129.765 152.153 133.381 1 44.27 ? C03 XMO 801 B 1 HETATM 6 C C04 XMO . . . F 2 127.643 151.055 134.159 1 44.27 ? C04 XMO 801 B 1 HETATM 7 C C07 XMO . . . F 2 125.992 150.87 135.953 1 44.27 ? C07 XMO 801 B 1 HETATM 8 C C08 XMO . . . F 2 126.21 150.557 137.428 1 44.27 ? C08 XMO 801 B 1 HETATM 9 C C09 XMO . . . F 2 125.631 151.692 138.314 1 44.27 ? C09 XMO 801 B 1 HETATM 10 C C14 XMO . . . F 2 129.478 152.453 137.878 1 44.27 ? C14 XMO 801 B 1 HETATM 11 C C15 XMO . . . F 2 130.665 153.353 137.843 1 44.27 ? C15 XMO 801 B 1 HETATM 12 C C16 XMO . . . F 2 131.247 153.869 139.123 1 44.27 ? C16 XMO 801 B 1 HETATM 13 C C18 XMO . . . F 2 129.466 152.593 140.419 1 44.27 ? C18 XMO 801 B 1 HETATM 14 N N13 XMO . . . F 2 128.886 152.081 139.155 1 44.27 ? N13 XMO 801 B 1 HETATM 15 N N17 XMO . . . F 2 130.658 153.496 140.389 1 44.27 ? N17 XMO 801 B 1 HETATM 16 N N20 XMO . . . F 2 132.394 154.737 139.085 1 44.27 ? N20 XMO 801 B 1 HETATM 17 O O05 XMO . . . F 2 126.864 150.802 133.342 1 44.27 ? O05 XMO 801 B 1 HETATM 18 O O06 XMO . . . F 2 127.194 151.529 135.481 1 44.27 ? O06 XMO 801 B 1 HETATM 19 O O12 XMO . . . F 2 127.499 150.553 137.667 1 44.27 ? O12 XMO 801 B 1 HETATM 20 O O19 XMO . . . F 2 128.983 152.288 141.433 1 44.27 ? O19 XMO 801 B 1 HETATM 21 O O21 XMO . . . F 2 132.972 155.1 137.819 1 44.27 ? O21 XMO 801 B 1 HETATM 22 O O22 XMO . . . F 2 126.136 151.399 140.747 1 44.27 ? O22 XMO 801 B 1 HETATM 23 O O23 XMO . . . F 2 124.465 151.322 138.806 1 44.27 ? O23 XMO 801 B 1 HETATM 24 H H101 XMO . . . F 2 126.943 152.982 139.582 1 44.27 ? H101 XMO 801 B 1 HETATM 25 H H111 XMO . . . F 2 127.892 150.373 139.957 1 44.27 ? H111 XMO 801 B 1 HETATM 26 H H012 XMO . . . F 2 130.394 149.429 132.93 1 44.27 ? H012 XMO 801 B 1 HETATM 27 H H013 XMO . . . F 2 129.145 150.101 131.83 1 44.27 ? H013 XMO 801 B 1 HETATM 28 H H011 XMO . . . F 2 128.747 148.931 133.126 1 44.27 ? H011 XMO 801 B 1 HETATM 29 H H021 XMO . . . F 2 129.648 150.607 134.818 1 44.27 ? H021 XMO 801 B 1 HETATM 30 H H033 XMO . . . F 2 130.011 152.774 134.238 1 44.27 ? H033 XMO 801 B 1 HETATM 31 H H031 XMO . . . F 2 130.678 151.925 132.824 1 44.27 ? H031 XMO 801 B 1 HETATM 32 H H032 XMO . . . F 2 129.039 152.694 132.715 1 44.27 ? H032 XMO 801 B 1 HETATM 33 H H072 XMO . . . F 2 125.156 151.514 135.838 1 44.27 ? H072 XMO 801 B 1 HETATM 34 H H071 XMO . . . F 2 125.828 149.943 135.394 1 44.27 ? H071 XMO 801 B 1 HETATM 35 H H081 XMO . . . F 2 125.771 149.609 137.69 1 44.27 ? H081 XMO 801 B 1 HETATM 36 H H091 XMO . . . F 2 125.527 152.639 137.72 1 44.27 ? H091 XMO 801 B 1 HETATM 37 H H141 XMO . . . F 2 129.056 152.08 136.957 1 44.27 ? H141 XMO 801 B 1 HETATM 38 H H151 XMO . . . F 2 131.117 153.638 136.875 1 44.27 ? H151 XMO 801 B 1 HETATM 39 H H201 XMO . . . F 2 132.793 155.089 139.944 1 44.27 ? H201 XMO 801 B 1 HETATM 40 H H211 XMO . . . F 2 133.678 155.656 137.955 1 44.27 ? H211 XMO 801 B 1 HETATM 41 H H221 XMO . . . F 2 125.336 150.983 140.583 1 44.27 ? H221 XMO 801 B 1 HETATM 42 H H231 XMO . . . F 2 123.755 151.614 138.202 1 44.27 ? H231 XMO 801 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 80 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 42 #