data_8TZ8 # _model_server_result.job_id zjR5B5yvxPAvocKHuBRfGw _model_server_result.datetime_utc '2024-10-19 07:38:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tz8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":802}' # _entry.id 8TZ8 # _exptl.entry_id 8TZ8 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8TZ8 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TZ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id LBN _chem_comp.mon_nstd_flag . _chem_comp.name 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(2R)-2-[(9Z)-9-Octadecenoyloxy]-3-(palmitoyloxy)propyl 2-(trimethylammonio)ethyl phosphate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 N1 LBN sing 171 n n O3 P1 LBN sing 172 n n O2 C9 LBN sing 173 n n O2 P1 LBN sing 174 n n C9 C6 LBN sing 175 n n O4 P1 LBN doub 176 n n P1 O1 LBN sing 177 n n C6 N1 LBN sing 178 n n N1 C15 LBN sing 179 n n N1 C18 LBN sing 180 n n O1 C1 LBN sing 181 n n C2 C1 LBN sing 182 n n C2 C3 LBN sing 183 n n C2 O7 LBN sing 184 n n C3 O5 LBN sing 185 n n O6 C25 LBN doub 186 n n O5 C25 LBN sing 187 n n O7 C34 LBN sing 188 n n C25 C26 LBN sing 189 n n C34 C35 LBN sing 190 n n C34 O8 LBN doub 191 n n C26 C27 LBN sing 192 n n C35 C36 LBN sing 193 n n C27 C28 LBN sing 194 n n C36 C37 LBN sing 195 n n C28 C29 LBN sing 196 n n C37 C38 LBN sing 197 n n C29 C30 LBN sing 198 n n C39 C38 LBN sing 199 n n C39 C40 LBN sing 200 n n C41 C40 LBN sing 201 n n C41 C42 LBN sing 202 n n C30 C31 LBN sing 203 n n C42 C5 LBN doub 204 z n C31 C32 LBN sing 205 n n C5 C8 LBN sing 206 n n C8 C11 LBN sing 207 n n C32 C33 LBN sing 208 n n C11 C14 LBN sing 209 n n C33 C4 LBN sing 210 n n C14 C17 LBN sing 211 n n C4 C7 LBN sing 212 n n C17 C20 LBN sing 213 n n C7 C10 LBN sing 214 n n C20 C22 LBN sing 215 n n C10 C13 LBN sing 216 n n C22 C23 LBN sing 217 n n C13 C16 LBN sing 218 n n C23 C24 LBN sing 219 n n C16 C19 LBN sing 220 n n C19 C21 LBN sing 221 n n C1 H1 LBN sing 222 n n C1 H2 LBN sing 223 n n C2 H3 LBN sing 224 n n C3 H4 LBN sing 225 n n C3 H5 LBN sing 226 n n C4 H6 LBN sing 227 n n C4 H7 LBN sing 228 n n C5 H8 LBN sing 229 n n C6 H9 LBN sing 230 n n C6 H10 LBN sing 231 n n C7 H11 LBN sing 232 n n C7 H12 LBN sing 233 n n C8 H13 LBN sing 234 n n C8 H14 LBN sing 235 n n C9 H15 LBN sing 236 n n C9 H16 LBN sing 237 n n C10 H17 LBN sing 238 n n C10 H18 LBN sing 239 n n C11 H19 LBN sing 240 n n C12 H20 LBN sing 241 n n C12 H21 LBN sing 242 n n C12 H22 LBN sing 243 n n C13 H23 LBN sing 244 n n C13 H24 LBN sing 245 n n C14 H25 LBN sing 246 n n C15 H26 LBN sing 247 n n C15 H27 LBN sing 248 n n C15 H28 LBN sing 249 n n C16 H30 LBN sing 250 n n C16 H31 LBN sing 251 n n C17 H32 LBN sing 252 n n C17 H33 LBN sing 253 n n C18 H34 LBN sing 254 n n C18 H35 LBN sing 255 n n C18 H36 LBN sing 256 n n C19 H37 LBN sing 257 n n C19 H38 LBN sing 258 n n C20 H39 LBN sing 259 n n C20 H40 LBN sing 260 n n C21 H41 LBN sing 261 n n C21 H42 LBN sing 262 n n C21 H43 LBN sing 263 n n C22 H44 LBN sing 264 n n C22 H45 LBN sing 265 n n C23 H46 LBN sing 266 n n C23 H47 LBN sing 267 n n C24 H48 LBN sing 268 n n C24 H49 LBN sing 269 n n C24 H50 LBN sing 270 n n C26 H51 LBN sing 271 n n C26 H52 LBN sing 272 n n C27 H53 LBN sing 273 n n C27 H54 LBN sing 274 n n C28 H55 LBN sing 275 n n C28 H56 LBN sing 276 n n C29 H57 LBN sing 277 n n C29 H58 LBN sing 278 n n C30 H59 LBN sing 279 n n C30 H60 LBN sing 280 n n C31 H61 LBN sing 281 n n C31 H62 LBN sing 282 n n C32 H63 LBN sing 283 n n C32 H64 LBN sing 284 n n C33 H65 LBN sing 285 n n C33 H66 LBN sing 286 n n C35 H67 LBN sing 287 n n C35 H68 LBN sing 288 n n C36 H69 LBN sing 289 n n C36 H70 LBN sing 290 n n C37 H71 LBN sing 291 n n C37 H72 LBN sing 292 n n C38 H73 LBN sing 293 n n C38 H74 LBN sing 294 n n C39 H75 LBN sing 295 n n C40 H76 LBN sing 296 n n C41 H77 LBN sing 297 n n C41 H78 LBN sing 298 n n C42 H79 LBN sing 299 n n C11 H80 LBN sing 300 n n C14 H81 LBN sing 301 n n C39 H82 LBN sing 302 n n C40 H83 LBN sing 303 n n # _atom_sites.entry_id 8TZ8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 XMO A 1 801 701 XMO MPV . E 3 LBN A 1 802 704 LBN LBN . F 2 XMO B 1 801 701 XMO MPV . G 2 XMO C 1 801 701 XMO MPV . H 3 LBN C 1 802 702 LBN LBN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LBN . . . H 3 112.477 97.122 157.204 1 65.42 ? C1 LBN 802 C 1 HETATM 2 P P1 LBN . . . H 3 112.694 98.34 159.542 1 65.42 ? P1 LBN 802 C 1 HETATM 3 C C2 LBN . . . H 3 111.523 96.18 156.451 1 65.42 ? C2 LBN 802 C 1 HETATM 4 C C3 LBN . . . H 3 110.597 96.982 155.558 1 65.42 ? C3 LBN 802 C 1 HETATM 5 C C5 LBN . . . H 3 110.297 97.02 143.758 1 65.42 ? C5 LBN 802 C 1 HETATM 6 O O1 LBN . . . H 3 112.096 97.136 158.559 1 65.42 ? O1 LBN 802 C 1 HETATM 7 C C8 LBN . . . H 3 111.179 95.927 143.122 1 65.42 ? C8 LBN 802 C 1 HETATM 8 O O2 LBN . . . H 3 112.462 99.683 158.894 1 65.42 ? O2 LBN 802 C 1 HETATM 9 C C11 LBN . . . H 3 110.546 95.449 141.787 1 65.42 ? C11 LBN 802 C 1 HETATM 10 O O3 LBN . . . H 3 114.172 98.129 159.752 1 65.42 ? O3 LBN 802 C 1 HETATM 11 C C14 LBN . . . H 3 111.31 94.265 141.172 1 65.42 ? C14 LBN 802 C 1 HETATM 12 O O4 LBN . . . H 3 111.92 98.298 160.993 1 65.42 ? O4 LBN 802 C 1 HETATM 13 C C25 LBN . . . H 3 108.872 96.654 153.97 1 65.42 ? C25 LBN 802 C 1 HETATM 14 O O5 LBN . . . H 3 109.9 96.079 154.74 1 65.42 ? O5 LBN 802 C 1 HETATM 15 C C26 LBN . . . H 3 109.112 96.94 152.482 1 65.42 ? C26 LBN 802 C 1 HETATM 16 O O6 LBN . . . H 3 107.832 96.917 154.468 1 65.42 ? O6 LBN 802 C 1 HETATM 17 C C27 LBN . . . H 3 108.047 96.316 151.557 1 65.42 ? C27 LBN 802 C 1 HETATM 18 C C28 LBN . . . H 3 107.911 97.121 150.252 1 65.42 ? C28 LBN 802 C 1 HETATM 19 C C29 LBN . . . H 3 107.332 96.303 149.09 1 65.42 ? C29 LBN 802 C 1 HETATM 20 C C30 LBN . . . H 3 106.568 97.2 148.108 1 65.42 ? C30 LBN 802 C 1 HETATM 21 C C31 LBN . . . H 3 106.912 96.93 146.633 1 65.42 ? C31 LBN 802 C 1 HETATM 22 C C32 LBN . . . H 3 106.318 98.017 145.705 1 65.42 ? C32 LBN 802 C 1 HETATM 23 C C34 LBN . . . H 3 112.998 95.776 154.57 1 65.42 ? C34 LBN 802 C 1 HETATM 24 O O7 LBN . . . H 3 112.259 95.247 155.674 1 65.42 ? O7 LBN 802 C 1 HETATM 25 C C35 LBN . . . H 3 112.82 95.161 153.154 1 65.42 ? C35 LBN 802 C 1 HETATM 26 O O8 LBN . . . H 3 113.739 96.688 154.72 1 65.42 ? O8 LBN 802 C 1 HETATM 27 C C36 LBN . . . H 3 113.131 96.19 152.045 1 65.42 ? C36 LBN 802 C 1 HETATM 28 C C37 LBN . . . H 3 112.771 95.663 150.651 1 65.42 ? C37 LBN 802 C 1 HETATM 29 C C38 LBN . . . H 3 112.303 96.786 149.719 1 65.42 ? C38 LBN 802 C 1 HETATM 30 C C39 LBN . . . H 3 112.256 96.315 148.26 1 65.42 ? C39 LBN 802 C 1 HETATM 31 C C40 LBN . . . H 3 111.627 97.337 147.306 1 65.42 ? C40 LBN 802 C 1 HETATM 32 C C41 LBN . . . H 3 111.676 96.828 145.843 1 65.42 ? C41 LBN 802 C 1 HETATM 33 C C42 LBN . . . H 3 110.521 97.433 145.019 1 65.42 ? C42 LBN 802 C 1 HETATM 34 H H1 LBN . . . H 3 113.495 96.763 157.118 1 65.42 ? H1 LBN 802 C 1 HETATM 35 H H2 LBN . . . H 3 112.404 98.124 156.795 1 65.42 ? H2 LBN 802 C 1 HETATM 36 H H3 LBN . . . H 3 110.928 95.637 157.176 1 65.42 ? H3 LBN 802 C 1 HETATM 37 H H4 LBN . . . H 3 109.894 97.539 156.169 1 65.42 ? H4 LBN 802 C 1 HETATM 38 H H5 LBN . . . H 3 111.17 97.67 154.944 1 65.42 ? H5 LBN 802 C 1 HETATM 39 H H8 LBN . . . H 3 109.482 97.452 143.188 1 65.42 ? H8 LBN 802 C 1 HETATM 40 H H13 LBN . . . H 3 111.254 95.081 143.796 1 65.42 ? H13 LBN 802 C 1 HETATM 41 H H14 LBN . . . H 3 112.171 96.327 142.929 1 65.42 ? H14 LBN 802 C 1 HETATM 42 H H19 LBN . . . H 3 109.517 95.149 141.97 1 65.42 ? H19 LBN 802 C 1 HETATM 43 H H25 LBN . . . H 3 112.37 94.403 141.348 1 65.42 ? H25 LBN 802 C 1 HETATM 44 H H51 LBN . . . H 3 110.084 96.545 152.208 1 65.42 ? H51 LBN 802 C 1 HETATM 45 H H52 LBN . . . H 3 109.118 98.014 152.331 1 65.42 ? H52 LBN 802 C 1 HETATM 46 H H53 LBN . . . H 3 107.091 96.303 152.071 1 65.42 ? H53 LBN 802 C 1 HETATM 47 H H54 LBN . . . H 3 108.335 95.296 151.316 1 65.42 ? H54 LBN 802 C 1 HETATM 48 H H55 LBN . . . H 3 108.891 97.488 149.964 1 65.42 ? H55 LBN 802 C 1 HETATM 49 H H56 LBN . . . H 3 107.265 97.97 150.441 1 65.42 ? H56 LBN 802 C 1 HETATM 50 H H57 LBN . . . H 3 106.653 95.558 149.49 1 65.42 ? H57 LBN 802 C 1 HETATM 51 H H58 LBN . . . H 3 108.141 95.799 148.568 1 65.42 ? H58 LBN 802 C 1 HETATM 52 H H59 LBN . . . H 3 105.507 97.044 148.251 1 65.42 ? H59 LBN 802 C 1 HETATM 53 H H60 LBN . . . H 3 106.799 98.236 148.323 1 65.42 ? H60 LBN 802 C 1 HETATM 54 H H61 LBN . . . H 3 107.988 96.914 146.513 1 65.42 ? H61 LBN 802 C 1 HETATM 55 H H62 LBN . . . H 3 106.509 95.961 146.345 1 65.42 ? H62 LBN 802 C 1 HETATM 56 H H63 LBN . . . H 3 105.472 98.479 146.205 1 65.42 ? H63 LBN 802 C 1 HETATM 57 H H64 LBN . . . H 3 107.074 98.774 145.53 1 65.42 ? H64 LBN 802 C 1 HETATM 58 H H67 LBN . . . H 3 111.796 94.819 153.043 1 65.42 ? H67 LBN 802 C 1 HETATM 59 H H68 LBN . . . H 3 113.489 94.311 153.048 1 65.42 ? H68 LBN 802 C 1 HETATM 60 H H69 LBN . . . H 3 112.566 97.095 152.235 1 65.42 ? H69 LBN 802 C 1 HETATM 61 H H70 LBN . . . H 3 114.189 96.426 152.069 1 65.42 ? H70 LBN 802 C 1 HETATM 62 H H71 LBN . . . H 3 113.642 95.184 150.216 1 65.42 ? H71 LBN 802 C 1 HETATM 63 H H72 LBN . . . H 3 111.98 94.931 150.745 1 65.42 ? H72 LBN 802 C 1 HETATM 64 H H73 LBN . . . H 3 112.986 97.628 149.804 1 65.42 ? H73 LBN 802 C 1 HETATM 65 H H74 LBN . . . H 3 111.312 97.104 150.021 1 65.42 ? H74 LBN 802 C 1 HETATM 66 H H75 LBN . . . H 3 111.683 95.399 148.215 1 65.42 ? H75 LBN 802 C 1 HETATM 67 H H76 LBN . . . H 3 110.595 97.504 147.592 1 65.42 ? H76 LBN 802 C 1 HETATM 68 H H77 LBN . . . H 3 111.591 95.747 145.844 1 65.42 ? H77 LBN 802 C 1 HETATM 69 H H78 LBN . . . H 3 112.62 97.112 145.399 1 65.42 ? H78 LBN 802 C 1 HETATM 70 H H79 LBN . . . H 3 109.892 98.203 145.455 1 65.42 ? H79 LBN 802 C 1 HETATM 71 H H80 LBN . . . H 3 110.552 96.275 141.078 1 65.42 ? H80 LBN 802 C 1 HETATM 72 H H81 LBN . . . H 3 110.989 93.351 141.66 1 65.42 ? H81 LBN 802 C 1 HETATM 73 H H82 LBN . . . H 3 113.266 96.109 147.932 1 65.42 ? H82 LBN 802 C 1 HETATM 74 H H83 LBN . . . H 3 112.171 98.274 147.376 1 65.42 ? H83 LBN 802 C 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 74 #