data_8TZ9 # _model_server_result.job_id PSyCJ0JHaZNO07laY1v7JQ _model_server_result.datetime_utc '2025-02-18 16:31:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tz9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":801}' # _entry.id 8TZ9 # _exptl.entry_id 8TZ9 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 329.306 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-hydroxy-5'-O-(2-methylpropanoyl)cytidine" _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8TZ9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TZ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C13 H19 N3 O7' _chem_comp.formula_weight 329.306 _chem_comp.id XMO _chem_comp.mon_nstd_flag . _chem_comp.name "N-hydroxy-5'-O-(2-methylpropanoyl)cytidine" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Molnupiravir # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O19 C18 XMO doub 374 n n N17 C18 XMO sing 375 n n N17 C16 XMO doub 376 n n C18 N13 XMO sing 377 n n N20 C16 XMO sing 378 n n N20 O21 XMO sing 379 n n O22 C10 XMO sing 380 n n C16 C15 XMO sing 381 n n N13 C11 XMO sing 382 n n N13 C14 XMO sing 383 n n C11 C10 XMO sing 384 n n C11 O12 XMO sing 385 n n C10 C09 XMO sing 386 n n C15 C14 XMO doub 387 n n O12 C08 XMO sing 388 n n C09 O23 XMO sing 389 n n C09 C08 XMO sing 390 n n C08 C07 XMO sing 391 n n C07 O06 XMO sing 392 n n O06 C04 XMO sing 393 n n C04 C02 XMO sing 394 n n C04 O05 XMO doub 395 n n C02 C03 XMO sing 396 n n C02 C01 XMO sing 397 n n C10 H101 XMO sing 398 n n C11 H111 XMO sing 399 n n C01 H012 XMO sing 400 n n C01 H013 XMO sing 401 n n C01 H011 XMO sing 402 n n C02 H021 XMO sing 403 n n C03 H033 XMO sing 404 n n C03 H031 XMO sing 405 n n C03 H032 XMO sing 406 n n C07 H072 XMO sing 407 n n C07 H071 XMO sing 408 n n C08 H081 XMO sing 409 n n C09 H091 XMO sing 410 n n C14 H141 XMO sing 411 n n C15 H151 XMO sing 412 n n N20 H201 XMO sing 413 n n O21 H211 XMO sing 414 n n O22 H221 XMO sing 415 n n O23 H231 XMO sing 416 n n # _atom_sites.entry_id 8TZ9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 XMO B 1 801 701 XMO MPV . E 2 XMO A 1 801 701 XMO MPV . F 2 XMO C 1 801 701 XMO MPV . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 XMO . . . F 2 154.636 130.05 139.306 1 69.82 ? C10 XMO 801 C 1 HETATM 2 C C11 XMO . . . F 2 153.394 130.343 139.484 1 69.82 ? C11 XMO 801 C 1 HETATM 3 C C01 XMO . . . F 2 150.799 129.344 132.606 1 69.82 ? C01 XMO 801 C 1 HETATM 4 C C02 XMO . . . F 2 151.808 129.307 133.757 1 69.82 ? C02 XMO 801 C 1 HETATM 5 C C03 XMO . . . F 2 151.167 128.822 135.013 1 69.82 ? C03 XMO 801 C 1 HETATM 6 C C04 XMO . . . F 2 152.465 130.693 133.948 1 69.82 ? C04 XMO 801 C 1 HETATM 7 C C07 XMO . . . F 2 153.906 130.988 135.935 1 69.82 ? C07 XMO 801 C 1 HETATM 8 C C08 XMO . . . F 2 153.843 131.464 137.387 1 69.82 ? C08 XMO 801 C 1 HETATM 9 C C09 XMO . . . F 2 155.132 131.04 138.156 1 69.82 ? C09 XMO 801 C 1 HETATM 10 C C14 XMO . . . F 2 152.271 128.162 138.924 1 69.82 ? C14 XMO 801 C 1 HETATM 11 C C15 XMO . . . F 2 151.486 126.972 139.356 1 69.82 ? C15 XMO 801 C 1 HETATM 12 C C16 XMO . . . F 2 151.073 126.822 140.791 1 69.82 ? C16 XMO 801 C 1 HETATM 13 C C18 XMO . . . F 2 152.228 129.022 141.319 1 69.82 ? C18 XMO 801 C 1 HETATM 14 N N13 XMO . . . F 2 152.639 129.18 139.9 1 69.82 ? N13 XMO 801 C 1 HETATM 15 N N17 XMO . . . F 2 151.435 127.827 141.761 1 69.82 ? N17 XMO 801 C 1 HETATM 16 N N20 XMO . . . F 2 150.313 125.673 141.196 1 69.82 ? N20 XMO 801 C 1 HETATM 17 O O05 XMO . . . F 2 152.821 131.284 133.019 1 69.82 ? O05 XMO 801 C 1 HETATM 18 O O06 XMO . . . F 2 152.626 131.264 135.304 1 69.82 ? O06 XMO 801 C 1 HETATM 19 O O12 XMO . . . F 2 152.835 130.869 137.993 1 69.82 ? O12 XMO 801 C 1 HETATM 20 O O19 XMO . . . F 2 152.535 129.849 142.077 1 69.82 ? O19 XMO 801 C 1 HETATM 21 O O21 XMO . . . F 2 149.955 124.672 140.233 1 69.82 ? O21 XMO 801 C 1 HETATM 22 O O22 XMO . . . F 2 155.389 130.3 140.53 1 69.82 ? O22 XMO 801 C 1 HETATM 23 O O23 XMO . . . F 2 155.703 132.098 138.698 1 69.82 ? O23 XMO 801 C 1 HETATM 24 H H101 XMO . . . F 2 154.767 128.991 138.971 1 69.82 ? H101 XMO 801 C 1 HETATM 25 H H111 XMO . . . F 2 153.308 131.194 140.248 1 69.82 ? H111 XMO 801 C 1 HETATM 26 H H012 XMO . . . F 2 151.292 129.641 131.714 1 69.82 ? H012 XMO 801 C 1 HETATM 27 H H013 XMO . . . F 2 150 130.101 132.868 1 69.82 ? H013 XMO 801 C 1 HETATM 28 H H011 XMO . . . F 2 150.366 128.373 132.507 1 69.82 ? H011 XMO 801 C 1 HETATM 29 H H021 XMO . . . F 2 152.609 128.587 133.482 1 69.82 ? H021 XMO 801 C 1 HETATM 30 H H033 XMO . . . F 2 150.35 129.478 135.25 1 69.82 ? H033 XMO 801 C 1 HETATM 31 H H031 XMO . . . F 2 150.781 127.816 134.859 1 69.82 ? H031 XMO 801 C 1 HETATM 32 H H032 XMO . . . F 2 151.907 128.844 135.861 1 69.82 ? H032 XMO 801 C 1 HETATM 33 H H072 XMO . . . F 2 154.095 129.936 135.915 1 69.82 ? H072 XMO 801 C 1 HETATM 34 H H071 XMO . . . F 2 154.693 131.54 135.401 1 69.82 ? H071 XMO 801 C 1 HETATM 35 H H081 XMO . . . F 2 153.748 132.529 137.423 1 69.82 ? H081 XMO 801 C 1 HETATM 36 H H091 XMO . . . F 2 155.847 130.516 137.462 1 69.82 ? H091 XMO 801 C 1 HETATM 37 H H141 XMO . . . F 2 152.578 128.274 137.898 1 69.82 ? H141 XMO 801 C 1 HETATM 38 H H151 XMO . . . F 2 151.21 126.204 138.611 1 69.82 ? H151 XMO 801 C 1 HETATM 39 H H201 XMO . . . F 2 150.026 125.578 142.155 1 69.82 ? H201 XMO 801 C 1 HETATM 40 H H211 XMO . . . F 2 149.743 123.887 140.647 1 69.82 ? H211 XMO 801 C 1 HETATM 41 H H221 XMO . . . F 2 156.286 130.355 140.322 1 69.82 ? H221 XMO 801 C 1 HETATM 42 H H231 XMO . . . F 2 156.681 132.037 138.592 1 69.82 ? H231 XMO 801 C 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 42 #