data_8TZI # _model_server_result.job_id pJdNQXpzpVseGETDzzuGkQ _model_server_result.datetime_utc '2024-11-30 10:50:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8tzi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":507}' # _entry.id 8TZI # _exptl.entry_id 8TZI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 726.79 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-[4-[3-[3,4-dimethoxy-5-[[4-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]phenyl]methoxy]phenyl]carbonyloxypropyl]-1,4-diazepan-1-yl]propyl 3,4,5-trimethoxybenzoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8TZI _cell.length_a 72.413 _cell.length_b 72.413 _cell.length_c 173.92 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8TZI _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C37 H48 N3 O12' _chem_comp.formula_weight 726.79 _chem_comp.id U00 _chem_comp.mon_nstd_flag . _chem_comp.name '3-[4-[3-[3,4-dimethoxy-5-[[4-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]phenyl]methoxy]phenyl]carbonyloxypropyl]-1,4-diazepan-1-yl]propyl 3,4,5-trimethoxybenzoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O02 C01 U00 sing 422 n n C03 O02 U00 sing 423 n n C04 C03 U00 doub 424 n y C06 O05 U00 sing 425 n n O05 C04 U00 sing 426 n n C07 C04 U00 sing 427 n y C09 O08 U00 sing 428 n n C10 C09 U00 sing 429 n n C11 C10 U00 doub 430 n y C12 C11 U00 sing 431 n y C13 C12 U00 doub 432 n y N14 C13 U00 sing 433 n n C17 C13 U00 sing 434 n y C18 C17 U00 doub 435 n y O08 C07 U00 sing 436 n n C19 C07 U00 doub 437 n y C20 C19 U00 sing 438 n y C23 O22 U00 sing 439 n n C24 C23 U00 sing 440 n n C25 C24 U00 sing 441 n n N26 C25 U00 sing 442 n n C27 N26 U00 sing 443 n n C28 C27 U00 sing 444 n n C29 C28 U00 sing 445 n n N30 C29 U00 sing 446 n n C32 C31 U00 sing 447 n n C31 N30 U00 sing 448 n n C33 N30 U00 sing 449 n n C34 C33 U00 sing 450 n n C35 C34 U00 sing 451 n n O36 C35 U00 sing 452 n n C37 O36 U00 sing 453 n n C39 C38 U00 doub 454 n y C40 C39 U00 sing 455 n y C42 O41 U00 sing 456 n n O41 C40 U00 sing 457 n n C43 C40 U00 doub 458 n y C46 O45 U00 sing 459 n n O45 C44 U00 sing 460 n n C47 C44 U00 doub 461 n y C44 C43 U00 sing 462 n y O48 C43 U00 sing 463 n n C49 O48 U00 sing 464 n n C38 C37 U00 sing 465 n n O50 C37 U00 doub 466 n n O22 C21 U00 sing 467 n n O51 C21 U00 doub 468 n n C21 C20 U00 sing 469 n n C52 C20 U00 doub 470 n y C03 C52 U00 sing 471 n y C10 C18 U00 sing 472 n y N26 C32 U00 sing 473 n n C38 C47 U00 sing 474 n y O15 N14 U00 doub 475 n n O16 N14 U00 sing 476 n n C17 H171 U00 sing 477 n n C01 H013 U00 sing 478 n n C01 H011 U00 sing 479 n n C01 H012 U00 sing 480 n n C06 H063 U00 sing 481 n n C06 H061 U00 sing 482 n n C06 H062 U00 sing 483 n n C11 H111 U00 sing 484 n n C12 H121 U00 sing 485 n n C09 H091 U00 sing 486 n n C09 H092 U00 sing 487 n n C18 H181 U00 sing 488 n n C19 H191 U00 sing 489 n n C23 H231 U00 sing 490 n n C23 H232 U00 sing 491 n n C24 H241 U00 sing 492 n n C24 H242 U00 sing 493 n n C25 H251 U00 sing 494 n n C25 H252 U00 sing 495 n n C27 H272 U00 sing 496 n n C27 H271 U00 sing 497 n n C28 H282 U00 sing 498 n n C28 H281 U00 sing 499 n n C29 H291 U00 sing 500 n n C29 H292 U00 sing 501 n n C31 H311 U00 sing 502 n n C31 H312 U00 sing 503 n n C32 H321 U00 sing 504 n n C32 H322 U00 sing 505 n n C33 H331 U00 sing 506 n n C33 H332 U00 sing 507 n n C34 H341 U00 sing 508 n n C34 H342 U00 sing 509 n n C35 H352 U00 sing 510 n n C35 H351 U00 sing 511 n n C39 H391 U00 sing 512 n n C42 H421 U00 sing 513 n n C42 H422 U00 sing 514 n n C42 H423 U00 sing 515 n n C46 H463 U00 sing 516 n n C46 H461 U00 sing 517 n n C46 H462 U00 sing 518 n n C47 H471 U00 sing 519 n n C49 H491 U00 sing 520 n n C49 H493 U00 sing 521 n n C49 H492 U00 sing 522 n n C52 H521 U00 sing 523 n n O16 H3 U00 sing 524 n n # _atom_sites.entry_id 8TZI _atom_sites.fract_transf_matrix[1][1] 0.01381 _atom_sites.fract_transf_matrix[1][2] 0.007973 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015946 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLC A 1 501 501 OLC OLC . C 2 OLC A 1 502 502 OLC OLC . D 2 OLC A 1 503 503 OLC OLC . E 2 OLC A 1 504 504 OLC OLC . F 2 OLC A 1 505 505 OLC OLC . G 2 OLC A 1 506 506 OLC OLC . H 3 U00 A 1 507 507 U00 U00 . I 4 HOH A 1 601 601 HOH HOH . I 4 HOH A 2 602 602 HOH HOH . I 4 HOH A 3 603 603 HOH HOH . I 4 HOH A 4 604 604 HOH HOH . I 4 HOH A 5 605 605 HOH HOH . I 4 HOH A 6 606 606 HOH HOH . I 4 HOH A 7 607 607 HOH HOH . I 4 HOH A 8 608 608 HOH HOH . I 4 HOH A 9 609 609 HOH HOH . I 4 HOH A 10 610 610 HOH HOH . I 4 HOH A 11 611 611 HOH HOH . I 4 HOH A 12 612 612 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 U00 . . . H 3 34.68 -7.499 -32.59 1 56.55 ? C13 U00 507 A 1 HETATM 2 C C17 U00 . . . H 3 34.273 -7.253 -31.271 1 50.41 ? C17 U00 507 A 1 HETATM 3 C C01 U00 . . . H 3 33.55 -16.5 -31.6 1 49.72 ? C01 U00 507 A 1 HETATM 4 C C04 U00 . . . H 3 31.939 -13.454 -31.903 1 51.19 ? C04 U00 507 A 1 HETATM 5 C C06 U00 . . . H 3 31.432 -13.742 -34.194 1 57.51 ? C06 U00 507 A 1 HETATM 6 C C11 U00 . . . H 3 33.076 -9.295 -32.764 1 57.26 ? C11 U00 507 A 1 HETATM 7 C C12 U00 . . . H 3 34.085 -8.516 -33.337 1 56.53 ? C12 U00 507 A 1 HETATM 8 C C03 U00 . . . H 3 32.001 -14.74 -31.354 1 49.84 ? C03 U00 507 A 1 HETATM 9 C C07 U00 . . . H 3 31.483 -12.382 -31.143 1 52.67 ? C07 U00 507 A 1 HETATM 10 C C09 U00 . . . H 3 31.541 -9.968 -30.857 1 52.3 ? C09 U00 507 A 1 HETATM 11 C C10 U00 . . . H 3 32.664 -9.055 -31.451 1 51.77 ? C10 U00 507 A 1 HETATM 12 C C18 U00 . . . H 3 33.259 -8.039 -30.696 1 46.69 ? C18 U00 507 A 1 HETATM 13 C C19 U00 . . . H 3 31.08 -12.602 -29.825 1 48.96 ? C19 U00 507 A 1 HETATM 14 C C20 U00 . . . H 3 31.148 -13.878 -29.273 1 46.98 ? C20 U00 507 A 1 HETATM 15 C C21 U00 . . . H 3 30.699 -14.055 -27.811 1 46.87 ? C21 U00 507 A 1 HETATM 16 C C23 U00 . . . H 3 29.54 -15.263 -26.146 1 49.83 ? C23 U00 507 A 1 HETATM 17 C C24 U00 . . . H 3 28.236 -14.457 -26.386 1 49.55 ? C24 U00 507 A 1 HETATM 18 C C25 U00 . . . H 3 27.459 -14.393 -25.036 1 51.48 ? C25 U00 507 A 1 HETATM 19 C C27 U00 . . . H 3 28.056 -12.611 -23.942 1 51.34 ? C27 U00 507 A 1 HETATM 20 C C28 U00 . . . H 3 29.332 -11.841 -23.515 1 47.12 ? C28 U00 507 A 1 HETATM 21 C C29 U00 . . . H 3 29.785 -12.111 -22.058 1 48.78 ? C29 U00 507 A 1 HETATM 22 C C31 U00 . . . H 3 28.615 -13.847 -21.65 1 49.85 ? C31 U00 507 A 1 HETATM 23 C C32 U00 . . . H 3 28.104 -14.557 -22.956 1 44.29 ? C32 U00 507 A 1 HETATM 24 C C33 U00 . . . H 3 30.475 -13.522 -20.554 1 52.82 ? C33 U00 507 A 1 HETATM 25 C C34 U00 . . . H 3 32.037 -13.457 -20.715 1 49.99 ? C34 U00 507 A 1 HETATM 26 C C35 U00 . . . H 3 32.743 -14.202 -19.524 1 38.45 ? C35 U00 507 A 1 HETATM 27 C C37 U00 . . . H 3 34.565 -15.516 -20.345 1 46.75 ? C37 U00 507 A 1 HETATM 28 C C38 U00 . . . H 3 35.009 -16.182 -21.679 1 43.48 ? C38 U00 507 A 1 HETATM 29 C C39 U00 . . . H 3 36.293 -16.728 -21.794 1 47.95 ? C39 U00 507 A 1 HETATM 30 C C40 U00 . . . H 3 36.69 -17.327 -22.993 1 51.61 ? C40 U00 507 A 1 HETATM 31 C C42 U00 . . . H 3 39.071 -17.14 -22.655 1 40.18 ? C42 U00 507 A 1 HETATM 32 C C43 U00 . . . H 3 35.798 -17.378 -24.067 1 48.18 ? C43 U00 507 A 1 HETATM 33 C C44 U00 . . . H 3 34.517 -16.831 -23.951 1 47.58 ? C44 U00 507 A 1 HETATM 34 C C46 U00 . . . H 3 32.359 -17.379 -24.719 1 50.58 ? C46 U00 507 A 1 HETATM 35 C C47 U00 . . . H 3 34.125 -16.23 -22.753 1 46.05 ? C47 U00 507 A 1 HETATM 36 C C49 U00 . . . H 3 37.123 -17.186 -25.982 1 42.9 ? C49 U00 507 A 1 HETATM 37 C C52 U00 . . . H 3 31.601 -14.951 -30.028 1 48.22 ? C52 U00 507 A 1 HETATM 38 N N14 U00 . . . H 3 35.737 -6.687 -33.208 1 66.76 ? N14 U00 507 A 1 HETATM 39 N N26 U00 . . . H 3 28.267 -13.887 -24.087 1 52.2 ? N26 U00 507 A 1 HETATM 40 N N30 U00 . . . H 3 29.847 -13.363 -21.746 1 47.25 ? N30 U00 507 A 1 HETATM 41 O O02 U00 . . . H 3 32.461 -15.806 -32.136 1 49.77 ? O02 U00 507 A 1 HETATM 42 O O05 U00 . . . H 3 32.341 -13.237 -33.24 1 53.29 ? O05 U00 507 A 1 HETATM 43 O O08 U00 . . . H 3 31.42 -11.082 -31.729 1 57.1 ? O08 U00 507 A 1 HETATM 44 O O15 U00 . . . H 3 36.121 -6.937 -34.493 1 66.07 ? O15 U00 507 A 1 HETATM 45 O O16 U00 . . . H 3 36.328 -5.694 -32.49 1 68.42 ? O16 U00 507 A 1 HETATM 46 O O22 U00 . . . H 3 30.302 -15.327 -27.341 1 52.96 ? O22 U00 507 A 1 HETATM 47 O O36 U00 . . . H 3 33.189 -15.467 -19.993 1 50.66 ? O36 U00 507 A 1 HETATM 48 O O41 U00 . . . H 3 37.988 -17.905 -23.141 1 45.36 ? O41 U00 507 A 1 HETATM 49 O O45 U00 . . . H 3 33.624 -16.879 -25.043 1 44.45 ? O45 U00 507 A 1 HETATM 50 O O48 U00 . . . H 3 36.208 -17.979 -25.276 1 40.4 ? O48 U00 507 A 1 HETATM 51 O O50 U00 . . . H 3 35.391 -15.065 -19.622 1 47.59 ? O50 U00 507 A 1 HETATM 52 O O51 U00 . . . H 3 30.69 -13.112 -27.087 1 53.82 ? O51 U00 507 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 52 #