data_8U0I # _model_server_result.job_id 1u8D6o1uHauUlVW46t4oiQ _model_server_result.datetime_utc '2024-11-24 00:55:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u0i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":104}' # _entry.id 8U0I # _exptl.entry_id 8U0I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8U0I _cell.length_a 50.317 _cell.length_b 50.317 _cell.length_c 90.596 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U0I _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 205 n n C1 C2 GOL sing 206 n n C1 H11 GOL sing 207 n n C1 H12 GOL sing 208 n n O1 HO1 GOL sing 209 n n C2 O2 GOL sing 210 n n C2 C3 GOL sing 211 n n C2 H2 GOL sing 212 n n O2 HO2 GOL sing 213 n n C3 O3 GOL sing 214 n n C3 H31 GOL sing 215 n n C3 H32 GOL sing 216 n n O3 HO3 GOL sing 217 n n # _atom_sites.entry_id 8U0I _atom_sites.fract_transf_matrix[1][1] 0.019874 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019874 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011038 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 C2E A 1 101 1 C2E C2E . C 2 C2E A 1 102 2 C2E C2E . D 3 GOL A 1 103 1 GOL GOL . E 3 GOL A 1 104 2 GOL GOL . F 3 GOL A 1 105 3 GOL GOL . G 4 HOH A 1 201 73 HOH HOH . G 4 HOH A 2 202 32 HOH HOH . G 4 HOH A 3 203 83 HOH HOH . G 4 HOH A 4 204 85 HOH HOH . G 4 HOH A 5 205 4 HOH HOH . G 4 HOH A 6 206 24 HOH HOH . G 4 HOH A 7 207 48 HOH HOH . G 4 HOH A 8 208 63 HOH HOH . G 4 HOH A 9 209 41 HOH HOH . G 4 HOH A 10 210 29 HOH HOH . G 4 HOH A 11 211 33 HOH HOH . G 4 HOH A 12 212 15 HOH HOH . G 4 HOH A 13 213 71 HOH HOH . G 4 HOH A 14 214 11 HOH HOH . G 4 HOH A 15 215 89 HOH HOH . G 4 HOH A 16 216 18 HOH HOH . G 4 HOH A 17 217 19 HOH HOH . G 4 HOH A 18 218 12 HOH HOH . G 4 HOH A 19 219 49 HOH HOH . G 4 HOH A 20 220 21 HOH HOH . G 4 HOH A 21 221 5 HOH HOH . G 4 HOH A 22 222 13 HOH HOH . G 4 HOH A 23 223 64 HOH HOH . G 4 HOH A 24 224 82 HOH HOH . G 4 HOH A 25 225 54 HOH HOH . G 4 HOH A 26 226 2 HOH HOH . G 4 HOH A 27 227 9 HOH HOH . G 4 HOH A 28 228 22 HOH HOH . G 4 HOH A 29 229 14 HOH HOH . G 4 HOH A 30 230 86 HOH HOH . G 4 HOH A 31 231 20 HOH HOH . G 4 HOH A 32 232 7 HOH HOH . G 4 HOH A 33 233 69 HOH HOH . G 4 HOH A 34 234 70 HOH HOH . G 4 HOH A 35 235 62 HOH HOH . G 4 HOH A 36 236 6 HOH HOH . G 4 HOH A 37 237 44 HOH HOH . G 4 HOH A 38 238 17 HOH HOH . G 4 HOH A 39 239 25 HOH HOH . G 4 HOH A 40 240 34 HOH HOH . G 4 HOH A 41 241 42 HOH HOH . G 4 HOH A 42 242 77 HOH HOH . G 4 HOH A 43 243 39 HOH HOH . G 4 HOH A 44 244 76 HOH HOH . G 4 HOH A 45 245 27 HOH HOH . G 4 HOH A 46 246 91 HOH HOH . G 4 HOH A 47 247 1 HOH HOH . G 4 HOH A 48 248 16 HOH HOH . G 4 HOH A 49 249 3 HOH HOH . G 4 HOH A 50 250 75 HOH HOH . G 4 HOH A 51 251 26 HOH HOH . G 4 HOH A 52 252 46 HOH HOH . G 4 HOH A 53 253 84 HOH HOH . G 4 HOH A 54 254 8 HOH HOH . G 4 HOH A 55 255 35 HOH HOH . G 4 HOH A 56 256 65 HOH HOH . G 4 HOH A 57 257 30 HOH HOH . G 4 HOH A 58 258 88 HOH HOH . G 4 HOH A 59 259 55 HOH HOH . G 4 HOH A 60 260 47 HOH HOH . G 4 HOH A 61 261 38 HOH HOH . G 4 HOH A 62 262 10 HOH HOH . G 4 HOH A 63 263 37 HOH HOH . G 4 HOH A 64 264 40 HOH HOH . G 4 HOH A 65 265 36 HOH HOH . G 4 HOH A 66 266 51 HOH HOH . G 4 HOH A 67 267 90 HOH HOH . G 4 HOH A 68 268 59 HOH HOH . G 4 HOH A 69 269 56 HOH HOH . G 4 HOH A 70 270 87 HOH HOH . G 4 HOH A 71 271 23 HOH HOH . G 4 HOH A 72 272 61 HOH HOH . G 4 HOH A 73 273 74 HOH HOH . G 4 HOH A 74 274 72 HOH HOH . G 4 HOH A 75 275 57 HOH HOH . G 4 HOH A 76 276 50 HOH HOH . G 4 HOH A 77 277 66 HOH HOH . G 4 HOH A 78 278 80 HOH HOH . G 4 HOH A 79 279 52 HOH HOH . G 4 HOH A 80 280 31 HOH HOH . G 4 HOH A 81 281 58 HOH HOH . G 4 HOH A 82 282 79 HOH HOH . G 4 HOH A 83 283 68 HOH HOH . G 4 HOH A 84 284 43 HOH HOH . G 4 HOH A 85 285 60 HOH HOH . G 4 HOH A 86 286 81 HOH HOH . G 4 HOH A 87 287 28 HOH HOH . G 4 HOH A 88 288 53 HOH HOH . G 4 HOH A 89 289 45 HOH HOH . G 4 HOH A 90 290 67 HOH HOH . G 4 HOH A 91 291 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 3 -5.848 9.385 -5.783 1 56.3 ? C1 GOL 104 A 1 HETATM 2 O O1 GOL . . . E 3 -7.187 9.733 -6.124 1 50.12 ? O1 GOL 104 A 1 HETATM 3 C C2 GOL . . . E 3 -4.96 9.302 -7.004 1 54.66 ? C2 GOL 104 A 1 HETATM 4 O O2 GOL . . . E 3 -5.618 8.546 -8.024 1 44.56 ? O2 GOL 104 A 1 HETATM 5 C C3 GOL . . . E 3 -3.595 8.733 -6.685 1 55.14 ? C3 GOL 104 A 1 HETATM 6 O O3 GOL . . . E 3 -3.402 8.613 -5.27 1 61.16 ? O3 GOL 104 A 1 HETATM 7 H H11 GOL . . . E 3 -5.848 8.511 -5.324 1 54.27 ? H11 GOL 104 A 1 HETATM 8 H H12 GOL . . . E 3 -5.484 10.063 -5.163 1 54.36 ? H12 GOL 104 A 1 HETATM 9 H HO1 GOL . . . E 3 -7.641 9.767 -5.407 0 49.98 ? HO1 GOL 104 A 1 HETATM 10 H H2 GOL . . . E 3 -4.83 10.22 -7.343 1 52.91 ? H2 GOL 104 A 1 HETATM 11 H HO2 GOL . . . E 3 -6.347 8.939 -8.217 0 44.49 ? HO2 GOL 104 A 1 HETATM 12 H H31 GOL . . . E 3 -2.903 9.326 -7.06 1 56.39 ? H31 GOL 104 A 1 HETATM 13 H H32 GOL . . . E 3 -3.505 7.843 -7.105 1 56.32 ? H32 GOL 104 A 1 HETATM 14 H HO3 GOL . . . E 3 -2.63 8.295 -5.142 0 61.09 ? HO3 GOL 104 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #