data_8U15 # _model_server_result.job_id qxUawhymuFMSLrSlFcvtdQ _model_server_result.datetime_utc '2024-12-02 17:26:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u15 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":503}' # _entry.id 8U15 # _exptl.entry_id 8U15 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.72 _cell.angle_gamma 90 _cell.entry_id 8U15 _cell.length_a 110.729 _cell.length_b 95.727 _cell.length_c 150.947 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U15 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L,M,N,O,P,AA,BA,CA 1 1 D,E,F,Q,R,S,T,U,V,W,X,Y,Z,DA,EA,FA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 J N N ? 6 K N N ? 6 L N N ? 6 M N N ? 6 P N N ? 6 S N N ? 6 T N N ? 6 U N N ? 6 V N N ? 6 W N N ? 6 Z N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 18 B CYS 18 1_555 B SG CYS 313 B CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 E SG CYS 18 E CYS 18 1_555 E SG CYS 313 E CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc1 A SG CYS 254 A CYS 323 1_555 G ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc2 A SG CYS 257 A CYS 326 1_555 G ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc3 A SG CYS 322 A CYS 391 1_555 G ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc4 A SG CYS 325 A CYS 394 1_555 G ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc5 C SG CYS 7 C CYS 384 1_555 N ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc6 C SG CYS 10 C CYS 387 1_555 N ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc7 C NE2 HIS 23 C HIS 400 1_555 N ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc8 C NE2 HIS 27 C HIS 404 1_555 N ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc9 C SG CYS 35 C CYS 412 1_555 O ZN ZN . C ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc10 C SG CYS 38 C CYS 415 1_555 O ZN ZN . C ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc11 C NE2 HIS 51 C HIS 428 1_555 O ZN ZN . C ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc12 C NE2 HIS 55 C HIS 432 1_555 O ZN ZN . C ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc13 D SG CYS 254 D CYS 323 1_555 Q ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc14 D SG CYS 257 D CYS 326 1_555 Q ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc15 D SG CYS 322 D CYS 391 1_555 Q ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc16 D SG CYS 325 D CYS 394 1_555 Q ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc17 F SG CYS 7 F CYS 384 1_555 X ZN ZN . F ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc18 F SG CYS 10 F CYS 387 1_555 X ZN ZN . F ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc19 F NE2 HIS 27 F HIS 404 1_555 X ZN ZN . F ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc20 F SG CYS 35 F CYS 412 1_555 Y ZN ZN . F ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc21 F SG CYS 38 F CYS 415 1_555 Y ZN ZN . F ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc22 F NE2 HIS 51 F HIS 428 1_555 Y ZN ZN . F ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc23 F NE2 HIS 55 F HIS 432 1_555 Y ZN ZN . F ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 354 n n S O2 SO4 doub 355 n n S O3 SO4 sing 356 n n S O4 SO4 sing 357 n n # _atom_sites.entry_id 8U15 _atom_sites.fract_transf_matrix[1][1] 0.009031 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000271 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010446 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006628 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 ZN A 1 501 501 ZN ZN . H 5 8W7 A 1 502 1 8W7 8W7 . I 6 SO4 A 1 503 5 SO4 SO4 . J 6 SO4 A 1 504 8 SO4 SO4 . K 6 SO4 A 1 505 10 SO4 SO4 . L 6 SO4 B 1 1201 6 SO4 SO4 . M 6 SO4 B 1 1202 12 SO4 SO4 . N 4 ZN C 1 501 501 ZN ZN . O 4 ZN C 1 502 502 ZN ZN . P 6 SO4 C 1 503 1 SO4 SO4 . Q 4 ZN D 1 501 501 ZN ZN . R 5 8W7 D 1 502 1 8W7 8W7 . S 6 SO4 D 1 503 3 SO4 SO4 . T 6 SO4 D 1 504 7 SO4 SO4 . U 6 SO4 E 1 1201 2 SO4 SO4 . V 6 SO4 E 1 1202 4 SO4 SO4 . W 6 SO4 E 1 1203 11 SO4 SO4 . X 4 ZN F 1 501 501 ZN ZN . Y 4 ZN F 1 502 502 ZN ZN . Z 6 SO4 F 1 503 9 SO4 SO4 . AA 7 HOH A 1 601 15 HOH HOH . AA 7 HOH A 2 602 17 HOH HOH . AA 7 HOH A 3 603 8 HOH HOH . AA 7 HOH A 4 604 10 HOH HOH . BA 7 HOH B 1 1301 3 HOH HOH . BA 7 HOH B 2 1302 19 HOH HOH . BA 7 HOH B 3 1303 18 HOH HOH . BA 7 HOH B 4 1304 7 HOH HOH . CA 7 HOH C 1 601 14 HOH HOH . DA 7 HOH D 1 601 12 HOH HOH . DA 7 HOH D 2 602 11 HOH HOH . EA 7 HOH E 1 1301 2 HOH HOH . FA 7 HOH F 1 601 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . I 6 -7.492 5.378 -59.63 1 118.34 ? S SO4 503 A 1 HETATM 2 O O1 SO4 . . . I 6 -6.268 5.403 -60.425 1 124.69 ? O1 SO4 503 A 1 HETATM 3 O O2 SO4 . . . I 6 -8.65 5.362 -60.518 1 96.94 ? O2 SO4 503 A 1 HETATM 4 O O3 SO4 . . . I 6 -7.508 4.178 -58.798 1 102.83 ? O3 SO4 503 A 1 HETATM 5 O O4 SO4 . . . I 6 -7.545 6.566 -58.782 1 100.11 ? O4 SO4 503 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 196 _model_server_stats.create_model_time_ms 153 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #