data_8U16 # _model_server_result.job_id SFJ9KqZCy0Eh5D4REdJVbg _model_server_result.datetime_utc '2024-11-04 18:41:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u16 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":502}' # _entry.id 8U16 # _exptl.entry_id 8U16 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8U16 _cell.length_a 95.536 _cell.length_b 151.986 _cell.length_c 218.46 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U16 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,P,Q,R 1 1 D,E,F,K,L,M,N,O,S,T,U 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 N N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 18 B CYS 18 1_555 B SG CYS 313 B CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc1 A SG CYS 254 A CYS 323 1_555 G ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc2 A SG CYS 257 A CYS 326 1_555 G ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc3 A SG CYS 322 A CYS 391 1_555 G ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc4 A SG CYS 325 A CYS 394 1_555 G ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc5 C SG CYS 7 C CYS 384 1_555 I ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc6 C SG CYS 10 C CYS 387 1_555 I ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc7 C NE2 HIS 23 C HIS 400 1_555 I ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc8 C NE2 HIS 27 C HIS 404 1_555 I ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc9 C SG CYS 35 C CYS 412 1_555 J ZN ZN . C ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc10 C NE2 HIS 51 C HIS 428 1_555 J ZN ZN . C ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc11 C NE2 HIS 55 C HIS 432 1_555 J ZN ZN . C ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc12 D SG CYS 254 D CYS 323 1_555 K ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc13 D SG CYS 257 D CYS 326 1_555 K ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc14 D SG CYS 322 D CYS 391 1_555 K ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc15 D SG CYS 325 D CYS 394 1_555 K ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc16 F SG CYS 7 F CYS 384 1_555 N ZN ZN . F ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc17 F SG CYS 10 F CYS 387 1_555 N ZN ZN . F ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc18 F NE2 HIS 23 F HIS 400 1_555 N ZN ZN . F ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc19 F NE2 HIS 27 F HIS 404 1_555 N ZN ZN . F ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc20 F SG CYS 35 F CYS 412 1_555 O ZN ZN . F ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc21 F SG CYS 38 F CYS 415 1_555 O ZN ZN . F ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc22 F NE2 HIS 51 F HIS 428 1_555 O ZN ZN . F ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc23 F NE2 HIS 55 F HIS 432 1_555 O ZN ZN . F ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8U16 _atom_sites.fract_transf_matrix[1][1] 0.010467 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00658 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004577 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 ZN A 1 501 501 ZN ZN . H 5 Y70 A 1 502 601 Y70 Y70 . I 4 ZN C 1 501 501 ZN ZN . J 4 ZN C 1 502 502 ZN ZN . K 4 ZN D 1 501 501 ZN ZN . L 5 Y70 D 1 502 601 Y70 Y70 . M 6 EDO E 1 1201 1201 EDO EDO . N 4 ZN F 1 501 501 ZN ZN . O 4 ZN F 1 502 502 ZN ZN . P 7 HOH A 1 601 2 HOH HOH . P 7 HOH A 2 602 12 HOH HOH . P 7 HOH A 3 603 35 HOH HOH . P 7 HOH A 4 604 3 HOH HOH . Q 7 HOH B 1 1201 33 HOH HOH . Q 7 HOH B 2 1202 34 HOH HOH . Q 7 HOH B 3 1203 13 HOH HOH . Q 7 HOH B 4 1204 6 HOH HOH . Q 7 HOH B 5 1205 25 HOH HOH . Q 7 HOH B 6 1206 15 HOH HOH . Q 7 HOH B 7 1207 9 HOH HOH . Q 7 HOH B 8 1208 30 HOH HOH . Q 7 HOH B 9 1209 16 HOH HOH . Q 7 HOH B 10 1210 32 HOH HOH . R 7 HOH C 1 601 1 HOH HOH . R 7 HOH C 2 602 31 HOH HOH . S 7 HOH D 1 601 5 HOH HOH . S 7 HOH D 2 602 18 HOH HOH . S 7 HOH D 3 603 14 HOH HOH . S 7 HOH D 4 604 7 HOH HOH . T 7 HOH E 1 1301 24 HOH HOH . T 7 HOH E 2 1302 22 HOH HOH . T 7 HOH E 3 1303 20 HOH HOH . T 7 HOH E 4 1304 17 HOH HOH . T 7 HOH E 5 1305 23 HOH HOH . T 7 HOH E 6 1306 4 HOH HOH . T 7 HOH E 7 1307 19 HOH HOH . T 7 HOH E 8 1308 28 HOH HOH . T 7 HOH E 9 1309 26 HOH HOH . T 7 HOH E 10 1310 27 HOH HOH . T 7 HOH E 11 1311 8 HOH HOH . T 7 HOH E 12 1312 10 HOH HOH . T 7 HOH E 13 1313 29 HOH HOH . T 7 HOH E 14 1314 21 HOH HOH . U 7 HOH F 1 601 11 HOH HOH . U 7 HOH F 2 602 36 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id O _atom_site.label_entity_id 4 _atom_site.Cartn_x -0.526 _atom_site.Cartn_y -14.464 _atom_site.Cartn_z 90.303 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 56.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 502 _atom_site.auth_asym_id F _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 95 _model_server_stats.query_time_ms 439 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #