data_8U2D # _model_server_result.job_id MDsFcM2dSuXfW2ANthwMqg _model_server_result.datetime_utc '2024-11-25 10:49:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u2d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":702}' # _entry.id 8U2D # _exptl.entry_id 8U2D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8U2D _cell.length_a 38.39 _cell.length_b 79.34 _cell.length_c 106.88 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U2D _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id NA _struct_conn.ptnr1_label_comp_id NA _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id NA _struct_conn.ptnr1_auth_seq_id 702 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id F _struct_conn.ptnr2_label_atom_id O1 _struct_conn.ptnr2_label_comp_id SO4 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id SO4 _struct_conn.ptnr2_auth_seq_id 705 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.255 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8U2D _atom_sites.fract_transf_matrix[1][1] 0.026048 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009356 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UQX A 1 701 701 UQX DRG . C 3 NA A 1 702 1 NA NA . D 4 CL A 1 703 2 CL CL . E 5 SO4 A 1 704 3 SO4 SO4 . F 5 SO4 A 1 705 4 SO4 SO4 . G 6 EDO A 1 706 5 EDO EDO . H 7 HOH A 1 801 71 HOH HOH . H 7 HOH A 2 802 55 HOH HOH . H 7 HOH A 3 803 77 HOH HOH . H 7 HOH A 4 804 104 HOH HOH . H 7 HOH A 5 805 157 HOH HOH . H 7 HOH A 6 806 135 HOH HOH . H 7 HOH A 7 807 127 HOH HOH . H 7 HOH A 8 808 150 HOH HOH . H 7 HOH A 9 809 112 HOH HOH . H 7 HOH A 10 810 85 HOH HOH . H 7 HOH A 11 811 2 HOH HOH . H 7 HOH A 12 812 20 HOH HOH . H 7 HOH A 13 813 76 HOH HOH . H 7 HOH A 14 814 60 HOH HOH . H 7 HOH A 15 815 48 HOH HOH . H 7 HOH A 16 816 11 HOH HOH . H 7 HOH A 17 817 65 HOH HOH . H 7 HOH A 18 818 100 HOH HOH . H 7 HOH A 19 819 32 HOH HOH . H 7 HOH A 20 820 138 HOH HOH . H 7 HOH A 21 821 39 HOH HOH . H 7 HOH A 22 822 115 HOH HOH . H 7 HOH A 23 823 18 HOH HOH . H 7 HOH A 24 824 68 HOH HOH . H 7 HOH A 25 825 28 HOH HOH . H 7 HOH A 26 826 75 HOH HOH . H 7 HOH A 27 827 95 HOH HOH . H 7 HOH A 28 828 141 HOH HOH . H 7 HOH A 29 829 73 HOH HOH . H 7 HOH A 30 830 131 HOH HOH . H 7 HOH A 31 831 110 HOH HOH . H 7 HOH A 32 832 52 HOH HOH . H 7 HOH A 33 833 17 HOH HOH . H 7 HOH A 34 834 4 HOH HOH . H 7 HOH A 35 835 140 HOH HOH . H 7 HOH A 36 836 5 HOH HOH . H 7 HOH A 37 837 36 HOH HOH . H 7 HOH A 38 838 23 HOH HOH . H 7 HOH A 39 839 13 HOH HOH . H 7 HOH A 40 840 9 HOH HOH . H 7 HOH A 41 841 29 HOH HOH . H 7 HOH A 42 842 45 HOH HOH . H 7 HOH A 43 843 151 HOH HOH . H 7 HOH A 44 844 67 HOH HOH . H 7 HOH A 45 845 26 HOH HOH . H 7 HOH A 46 846 158 HOH HOH . H 7 HOH A 47 847 47 HOH HOH . H 7 HOH A 48 848 156 HOH HOH . H 7 HOH A 49 849 78 HOH HOH . H 7 HOH A 50 850 3 HOH HOH . H 7 HOH A 51 851 66 HOH HOH . H 7 HOH A 52 852 10 HOH HOH . H 7 HOH A 53 853 148 HOH HOH . H 7 HOH A 54 854 84 HOH HOH . H 7 HOH A 55 855 134 HOH HOH . H 7 HOH A 56 856 111 HOH HOH . H 7 HOH A 57 857 117 HOH HOH . H 7 HOH A 58 858 56 HOH HOH . H 7 HOH A 59 859 27 HOH HOH . H 7 HOH A 60 860 105 HOH HOH . H 7 HOH A 61 861 34 HOH HOH . H 7 HOH A 62 862 43 HOH HOH . H 7 HOH A 63 863 69 HOH HOH . H 7 HOH A 64 864 25 HOH HOH . H 7 HOH A 65 865 12 HOH HOH . H 7 HOH A 66 866 94 HOH HOH . H 7 HOH A 67 867 8 HOH HOH . H 7 HOH A 68 868 107 HOH HOH . H 7 HOH A 69 869 70 HOH HOH . H 7 HOH A 70 870 130 HOH HOH . H 7 HOH A 71 871 40 HOH HOH . H 7 HOH A 72 872 144 HOH HOH . H 7 HOH A 73 873 49 HOH HOH . H 7 HOH A 74 874 74 HOH HOH . H 7 HOH A 75 875 129 HOH HOH . H 7 HOH A 76 876 14 HOH HOH . H 7 HOH A 77 877 146 HOH HOH . H 7 HOH A 78 878 61 HOH HOH . H 7 HOH A 79 879 16 HOH HOH . H 7 HOH A 80 880 96 HOH HOH . H 7 HOH A 81 881 92 HOH HOH . H 7 HOH A 82 882 145 HOH HOH . H 7 HOH A 83 883 154 HOH HOH . H 7 HOH A 84 884 31 HOH HOH . H 7 HOH A 85 885 114 HOH HOH . H 7 HOH A 86 886 30 HOH HOH . H 7 HOH A 87 887 101 HOH HOH . H 7 HOH A 88 888 125 HOH HOH . H 7 HOH A 89 889 116 HOH HOH . H 7 HOH A 90 890 1 HOH HOH . H 7 HOH A 91 891 37 HOH HOH . H 7 HOH A 92 892 128 HOH HOH . H 7 HOH A 93 893 122 HOH HOH . H 7 HOH A 94 894 46 HOH HOH . H 7 HOH A 95 895 64 HOH HOH . H 7 HOH A 96 896 80 HOH HOH . H 7 HOH A 97 897 109 HOH HOH . H 7 HOH A 98 898 22 HOH HOH . H 7 HOH A 99 899 15 HOH HOH . H 7 HOH A 100 900 59 HOH HOH . H 7 HOH A 101 901 113 HOH HOH . H 7 HOH A 102 902 149 HOH HOH . H 7 HOH A 103 903 82 HOH HOH . H 7 HOH A 104 904 57 HOH HOH . H 7 HOH A 105 905 132 HOH HOH . H 7 HOH A 106 906 161 HOH HOH . H 7 HOH A 107 907 81 HOH HOH . H 7 HOH A 108 908 108 HOH HOH . H 7 HOH A 109 909 58 HOH HOH . H 7 HOH A 110 910 54 HOH HOH . H 7 HOH A 111 911 155 HOH HOH . H 7 HOH A 112 912 102 HOH HOH . H 7 HOH A 113 913 103 HOH HOH . H 7 HOH A 114 914 35 HOH HOH . H 7 HOH A 115 915 51 HOH HOH . H 7 HOH A 116 916 97 HOH HOH . H 7 HOH A 117 917 106 HOH HOH . H 7 HOH A 118 918 120 HOH HOH . H 7 HOH A 119 919 38 HOH HOH . H 7 HOH A 120 920 133 HOH HOH . H 7 HOH A 121 921 72 HOH HOH . H 7 HOH A 122 922 143 HOH HOH . H 7 HOH A 123 923 6 HOH HOH . H 7 HOH A 124 924 126 HOH HOH . H 7 HOH A 125 925 86 HOH HOH . H 7 HOH A 126 926 19 HOH HOH . H 7 HOH A 127 927 83 HOH HOH . H 7 HOH A 128 928 33 HOH HOH . H 7 HOH A 129 929 63 HOH HOH . H 7 HOH A 130 930 24 HOH HOH . H 7 HOH A 131 931 41 HOH HOH . H 7 HOH A 132 932 98 HOH HOH . H 7 HOH A 133 933 153 HOH HOH . H 7 HOH A 134 934 79 HOH HOH . H 7 HOH A 135 935 7 HOH HOH . H 7 HOH A 136 936 142 HOH HOH . H 7 HOH A 137 937 93 HOH HOH . H 7 HOH A 138 938 44 HOH HOH . H 7 HOH A 139 939 42 HOH HOH . H 7 HOH A 140 940 147 HOH HOH . H 7 HOH A 141 941 53 HOH HOH . H 7 HOH A 142 942 139 HOH HOH . H 7 HOH A 143 943 90 HOH HOH . H 7 HOH A 144 944 136 HOH HOH . H 7 HOH A 145 945 87 HOH HOH . H 7 HOH A 146 946 121 HOH HOH . H 7 HOH A 147 947 118 HOH HOH . H 7 HOH A 148 948 162 HOH HOH . H 7 HOH A 149 949 88 HOH HOH . H 7 HOH A 150 950 50 HOH HOH . H 7 HOH A 151 951 160 HOH HOH . H 7 HOH A 152 952 62 HOH HOH . H 7 HOH A 153 953 89 HOH HOH . H 7 HOH A 154 954 159 HOH HOH . H 7 HOH A 155 955 137 HOH HOH . H 7 HOH A 156 956 91 HOH HOH . H 7 HOH A 157 957 99 HOH HOH . H 7 HOH A 158 958 152 HOH HOH . H 7 HOH A 159 959 21 HOH HOH . H 7 HOH A 160 960 119 HOH HOH . H 7 HOH A 161 961 123 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -10.754 _atom_site.Cartn_y 26.874 _atom_site.Cartn_z -37.24 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.83 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 702 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #