data_8U32 # _model_server_result.job_id QKifaGA3xW0eqYFcF3iv1g _model_server_result.datetime_utc '2024-11-22 12:30:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u32 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":202}' # _entry.id 8U32 # _exptl.entry_id 8U32 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8U32 _cell.length_a 76.482 _cell.length_b 88.881 _cell.length_c 235.859 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U32 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,I,J,K 1 1 D,E,F,G,H,L,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 45 A CYS 54 1_555 A SG CYS 114 A CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf2 B SG CYS 23 B CYS 23 1_555 B SG CYS 90 B CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? disulf ? disulf3 B SG CYS 138 B CYS 138 1_555 B SG CYS 198 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 C SG CYS 22 C CYS 22 1_555 C SG CYS 98 C CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf5 C SG CYS 154 C CYS 154 1_555 C SG CYS 210 C CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf6 D SG CYS 45 D CYS 54 1_555 D SG CYS 114 D CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? disulf ? disulf7 E SG CYS 23 E CYS 23 1_555 E SG CYS 90 E CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf8 E SG CYS 138 E CYS 138 1_555 E SG CYS 198 E CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf9 F SG CYS 22 F CYS 22 1_555 F SG CYS 98 F CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf10 F SG CYS 154 F CYS 154 1_555 F SG CYS 210 F CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? covale ? covale1 D ND2 ASN 40 D ASN 49 1_555 H C1 NAG . D NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 D ND2 ASN 49 D ASN 58 1_555 G C1 NAG . D NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 237 n n C1 O1 NAG sing 238 n n C1 O5 NAG sing 239 n n C1 H1 NAG sing 240 n n C2 C3 NAG sing 241 n n C2 N2 NAG sing 242 n n C2 H2 NAG sing 243 n n C3 C4 NAG sing 244 n n C3 O3 NAG sing 245 n n C3 H3 NAG sing 246 n n C4 C5 NAG sing 247 n n C4 O4 NAG sing 248 n n C4 H4 NAG sing 249 n n C5 C6 NAG sing 250 n n C5 O5 NAG sing 251 n n C5 H5 NAG sing 252 n n C6 O6 NAG sing 253 n n C6 H61 NAG sing 254 n n C6 H62 NAG sing 255 n n C7 C8 NAG sing 256 n n C7 N2 NAG sing 257 n n C7 O7 NAG doub 258 n n C8 H81 NAG sing 259 n n C8 H82 NAG sing 260 n n C8 H83 NAG sing 261 n n N2 HN2 NAG sing 262 n n O1 HO1 NAG sing 263 n n O3 HO3 NAG sing 264 n n O4 HO4 NAG sing 265 n n O6 HO6 NAG sing 266 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 8U32 _atom_sites.fract_transf_matrix[1][1] 0.013075 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011251 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00424 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 NAG D 1 201 203 NAG NAG . H 4 NAG D 1 202 204 NAG NAG . I 5 HOH A 1 201 186 HOH HOH . J 5 HOH B 1 301 134 HOH HOH . J 5 HOH B 2 302 128 HOH HOH . J 5 HOH B 3 303 1 HOH HOH . J 5 HOH B 4 304 102 HOH HOH . J 5 HOH B 5 305 19 HOH HOH . J 5 HOH B 6 306 29 HOH HOH . J 5 HOH B 7 307 115 HOH HOH . J 5 HOH B 8 308 156 HOH HOH . J 5 HOH B 9 309 59 HOH HOH . J 5 HOH B 10 310 80 HOH HOH . J 5 HOH B 11 311 123 HOH HOH . J 5 HOH B 12 312 14 HOH HOH . J 5 HOH B 13 313 71 HOH HOH . J 5 HOH B 14 314 159 HOH HOH . J 5 HOH B 15 315 18 HOH HOH . J 5 HOH B 16 316 12 HOH HOH . J 5 HOH B 17 317 153 HOH HOH . J 5 HOH B 18 318 107 HOH HOH . J 5 HOH B 19 319 146 HOH HOH . J 5 HOH B 20 320 54 HOH HOH . J 5 HOH B 21 321 33 HOH HOH . J 5 HOH B 22 322 187 HOH HOH . J 5 HOH B 23 323 28 HOH HOH . J 5 HOH B 24 324 52 HOH HOH . J 5 HOH B 25 325 16 HOH HOH . J 5 HOH B 26 326 131 HOH HOH . J 5 HOH B 27 327 39 HOH HOH . J 5 HOH B 28 328 111 HOH HOH . J 5 HOH B 29 329 44 HOH HOH . J 5 HOH B 30 330 61 HOH HOH . J 5 HOH B 31 331 98 HOH HOH . J 5 HOH B 32 332 41 HOH HOH . J 5 HOH B 33 333 133 HOH HOH . J 5 HOH B 34 334 48 HOH HOH . J 5 HOH B 35 335 109 HOH HOH . J 5 HOH B 36 336 110 HOH HOH . J 5 HOH B 37 337 157 HOH HOH . J 5 HOH B 38 338 43 HOH HOH . J 5 HOH B 39 339 3 HOH HOH . J 5 HOH B 40 340 49 HOH HOH . J 5 HOH B 41 341 100 HOH HOH . J 5 HOH B 42 342 64 HOH HOH . J 5 HOH B 43 343 42 HOH HOH . J 5 HOH B 44 344 101 HOH HOH . J 5 HOH B 45 345 112 HOH HOH . J 5 HOH B 46 346 68 HOH HOH . J 5 HOH B 47 347 31 HOH HOH . J 5 HOH B 48 348 53 HOH HOH . J 5 HOH B 49 349 37 HOH HOH . J 5 HOH B 50 350 120 HOH HOH . J 5 HOH B 51 351 77 HOH HOH . J 5 HOH B 52 352 142 HOH HOH . J 5 HOH B 53 353 124 HOH HOH . K 5 HOH C 1 301 20 HOH HOH . K 5 HOH C 2 302 51 HOH HOH . K 5 HOH C 3 303 30 HOH HOH . K 5 HOH C 4 304 58 HOH HOH . K 5 HOH C 5 305 147 HOH HOH . K 5 HOH C 6 306 17 HOH HOH . K 5 HOH C 7 307 34 HOH HOH . K 5 HOH C 8 308 5 HOH HOH . K 5 HOH C 9 309 126 HOH HOH . K 5 HOH C 10 310 32 HOH HOH . K 5 HOH C 11 311 72 HOH HOH . K 5 HOH C 12 312 78 HOH HOH . K 5 HOH C 13 313 62 HOH HOH . K 5 HOH C 14 314 56 HOH HOH . K 5 HOH C 15 315 82 HOH HOH . K 5 HOH C 16 316 65 HOH HOH . K 5 HOH C 17 317 25 HOH HOH . K 5 HOH C 18 318 15 HOH HOH . K 5 HOH C 19 319 165 HOH HOH . K 5 HOH C 20 320 183 HOH HOH . K 5 HOH C 21 321 136 HOH HOH . K 5 HOH C 22 322 36 HOH HOH . K 5 HOH C 23 323 81 HOH HOH . K 5 HOH C 24 324 47 HOH HOH . K 5 HOH C 25 325 35 HOH HOH . K 5 HOH C 26 326 23 HOH HOH . K 5 HOH C 27 327 84 HOH HOH . K 5 HOH C 28 328 155 HOH HOH . K 5 HOH C 29 329 164 HOH HOH . K 5 HOH C 30 330 66 HOH HOH . K 5 HOH C 31 331 129 HOH HOH . K 5 HOH C 32 332 178 HOH HOH . K 5 HOH C 33 333 67 HOH HOH . K 5 HOH C 34 334 177 HOH HOH . K 5 HOH C 35 335 70 HOH HOH . K 5 HOH C 36 336 90 HOH HOH . K 5 HOH C 37 337 117 HOH HOH . K 5 HOH C 38 338 88 HOH HOH . K 5 HOH C 39 339 13 HOH HOH . K 5 HOH C 40 340 169 HOH HOH . K 5 HOH C 41 341 188 HOH HOH . K 5 HOH C 42 342 154 HOH HOH . K 5 HOH C 43 343 21 HOH HOH . K 5 HOH C 44 344 160 HOH HOH . K 5 HOH C 45 345 121 HOH HOH . K 5 HOH C 46 346 184 HOH HOH . K 5 HOH C 47 347 119 HOH HOH . K 5 HOH C 48 348 92 HOH HOH . K 5 HOH C 49 349 170 HOH HOH . L 5 HOH D 1 301 91 HOH HOH . L 5 HOH D 2 302 4 HOH HOH . L 5 HOH D 3 303 97 HOH HOH . L 5 HOH D 4 304 57 HOH HOH . M 5 HOH E 1 301 108 HOH HOH . M 5 HOH E 2 302 74 HOH HOH . M 5 HOH E 3 303 172 HOH HOH . M 5 HOH E 4 304 94 HOH HOH . M 5 HOH E 5 305 40 HOH HOH . M 5 HOH E 6 306 130 HOH HOH . M 5 HOH E 7 307 176 HOH HOH . M 5 HOH E 8 308 10 HOH HOH . M 5 HOH E 9 309 6 HOH HOH . M 5 HOH E 10 310 24 HOH HOH . M 5 HOH E 11 311 125 HOH HOH . M 5 HOH E 12 312 106 HOH HOH . M 5 HOH E 13 313 166 HOH HOH . M 5 HOH E 14 314 104 HOH HOH . M 5 HOH E 15 315 113 HOH HOH . M 5 HOH E 16 316 189 HOH HOH . M 5 HOH E 17 317 122 HOH HOH . N 5 HOH F 1 301 96 HOH HOH . N 5 HOH F 2 302 99 HOH HOH . N 5 HOH F 3 303 93 HOH HOH . N 5 HOH F 4 304 140 HOH HOH . N 5 HOH F 5 305 79 HOH HOH . N 5 HOH F 6 306 7 HOH HOH . N 5 HOH F 7 307 22 HOH HOH . N 5 HOH F 8 308 8 HOH HOH . N 5 HOH F 9 309 2 HOH HOH . N 5 HOH F 10 310 11 HOH HOH . N 5 HOH F 11 311 190 HOH HOH . N 5 HOH F 12 312 46 HOH HOH . N 5 HOH F 13 313 105 HOH HOH . N 5 HOH F 14 314 141 HOH HOH . N 5 HOH F 15 315 73 HOH HOH . N 5 HOH F 16 316 55 HOH HOH . N 5 HOH F 17 317 114 HOH HOH . N 5 HOH F 18 318 38 HOH HOH . N 5 HOH F 19 319 27 HOH HOH . N 5 HOH F 20 320 45 HOH HOH . N 5 HOH F 21 321 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . H 4 10.011 -51.229 -7.489 1 92.2 ? C1 NAG 202 D 1 HETATM 2 C C2 NAG . . . H 4 10.451 -51.164 -8.956 1 95.34 ? C2 NAG 202 D 1 HETATM 3 C C3 NAG . . . H 4 10.063 -52.451 -9.688 1 96.74 ? C3 NAG 202 D 1 HETATM 4 C C4 NAG . . . H 4 10.581 -53.675 -8.941 1 97.7 ? C4 NAG 202 D 1 HETATM 5 C C5 NAG . . . H 4 10.098 -53.641 -7.493 1 97.61 ? C5 NAG 202 D 1 HETATM 6 C C6 NAG . . . H 4 10.639 -54.778 -6.652 1 96.23 ? C6 NAG 202 D 1 HETATM 7 C C7 NAG . . . H 4 10.58 -48.932 -9.978 1 94.71 ? C7 NAG 202 D 1 HETATM 8 C C8 NAG . . . H 4 9.81 -47.829 -10.643 1 90.94 ? C8 NAG 202 D 1 HETATM 9 N N2 NAG . . . H 4 9.87 -50.006 -9.618 1 95.34 ? N2 NAG 202 D 1 HETATM 10 O O3 NAG . . . H 4 10.605 -52.421 -11.004 1 98.95 ? O3 NAG 202 D 1 HETATM 11 O O4 NAG . . . H 4 10.143 -54.873 -9.576 1 94.28 ? O4 NAG 202 D 1 HETATM 12 O O5 NAG . . . H 4 10.534 -52.421 -6.876 1 94.74 ? O5 NAG 202 D 1 HETATM 13 O O6 NAG . . . H 4 10.592 -54.475 -5.264 1 92.08 ? O6 NAG 202 D 1 HETATM 14 O O7 NAG . . . H 4 11.791 -48.854 -9.775 1 96.06 ? O7 NAG 202 D 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 14 #